Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 3.1e-90 335.1 170 100.0
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 1.9e-34 149.8 157 52.2
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 1.3e-32 143.7 150 52.0
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 3.6e-30 135.6 130 50.8
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 1.1e-29 134.0 192 43.8
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 8.9e-29 131.0 155 49.0
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 8.9e-29 131.0 139 44.6
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 1.2e-28 130.6 138 45.7
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 1.5e-28 130.2 139 43.9
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 4.4e-28 128.6 131 48.1
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 4.4e-28 128.6 131 47.3
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 5.8e-28 128.3 132 44.7
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 7.6e-28 127.9 131 47.3
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 7.6e-28 127.9 131 47.3
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 7.6e-28 127.9 131 47.3
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 9.9e-28 127.5 131 48.9
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.3e-27 127.1 139 43.2
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.7e-27 126.7 139 43.2
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 2.2e-27 126.3 139 44.6
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 2.2e-27 126.3 131 48.1
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 2.2e-27 126.3 131 47.3
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 2.9e-27 125.9 131 48.1
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 3.8e-27 125.6 133 44.4
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 4.9e-27 125.2 133 44.4
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 4.9e-27 125.2 131 47.3
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 4.9e-27 125.2 139 41.7
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 4.9e-27 125.2 147 44.2
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 6.4e-27 124.8 131 44.3
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 6.4e-27 124.8 134 43.3
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 8.4e-27 124.4 131 45.8
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 1.1e-26 124.0 131 47.3
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 1.1e-26 124.0 131 45.8
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 1.4e-26 123.6 131 42.0
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 1.4e-26 123.6 127 45.7
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.4e-26 123.6 127 48.8
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 1.4e-26 123.6 131 45.0
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 1.9e-26 123.2 131 45.8
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 1.9e-26 123.2 131 43.5
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 2.4e-26 122.9 127 44.9
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 2.4e-26 122.9 127 44.9
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 2.4e-26 122.9 131 46.6
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 2.4e-26 122.9 131 46.6
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 3.2e-26 122.5 152 39.5
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 3.2e-26 122.5 131 41.2
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 3.2e-26 122.5 131 45.8
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 4.1e-26 122.1 135 43.0
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 4.1e-26 122.1 131 44.3
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 4.1e-26 122.1 133 42.9
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 4.1e-26 122.1 134 43.3
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 4.1e-26 122.1 131 45.8
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 5.4e-26 121.7 127 44.9
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 5.4e-26 121.7 131 44.3
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 7.1e-26 121.3 141 41.1
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 7.1e-26 121.3 133 42.9
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 7.1e-26 121.3 154 41.6
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 9.2e-26 120.9 127 44.1
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 9.2e-26 120.9 144 41.0
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 9.2e-26 120.9 131 45.8
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 1.2e-25 120.6 131 42.0
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 1.2e-25 120.6 130 46.9
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 1.2e-25 120.6 165 40.0
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 2.1e-25 119.8 127 43.3
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 2.1e-25 119.8 130 44.6
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 2.7e-25 119.4 165 39.4
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 2.7e-25 119.4 130 43.1
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 3.5e-25 119.0 120 43.3
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 3.5e-25 119.0 127 42.5
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 6.0e-25 118.2 120 45.8
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 6.0e-25 118.2 127 42.5
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 7.8e-25 117.9 127 43.3
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 7.8e-25 117.9 120 47.5
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 7.8e-25 117.9 127 44.1
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 1.0e-24 117.5 120 45.0
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 1.0e-24 117.5 127 42.5
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 1.0e-24 117.5 133 41.4
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 1.0e-24 117.5 137 45.3
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 1.0e-24 117.5 127 42.5
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 1.3e-24 117.1 130 43.8
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 1.3e-24 117.1 127 41.7
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 1.7e-24 116.7 120 45.0
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 1.7e-24 116.7 146 39.7
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 1.7e-24 116.7 131 43.5
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 2.3e-24 116.3 127 42.5
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 2.3e-24 116.3 131 42.0
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 2.3e-24 116.3 157 41.4
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 3.0e-24 115.9 129 43.4
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 3.0e-24 115.9 147 38.8
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 3.0e-24 115.9 157 38.9
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 5.1e-24 115.2 134 41.0
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 5.1e-24 115.2 130 42.3
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 5.1e-24 115.2 120 46.7
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 8.6e-24 114.4 139 36.7
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 1.9e-23 113.2 164 41.5
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 7.3e-23 111.3 141 38.3
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 9.6e-23 110.9 131 41.2
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 9.6e-23 110.9 133 41.4
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 1.2e-22 110.5 131 41.2
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 2.8e-22 109.4 123 43.9
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 2.8e-22 109.4 122 47.5
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 4.7e-22 108.6 104 49.0
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 6.2e-22 108.2 133 39.8
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 6.2e-22 108.2 132 40.2
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 8.1e-22 107.8 143 38.5
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 1.1e-21 107.5 134 44.0
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 5.2e-21 105.1 121 41.3
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 2.6e-20 102.8 150 37.3
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 5.8e-20 101.7 103 49.5
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 7.6e-20 101.3 119 42.0
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 9.9e-20 100.9 151 36.4
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 2.2e-19 99.8 100 46.0
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 2.9e-19 99.4 127 39.4
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 8.4e-19 97.8 99 45.5
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 1.1e-18 97.4 102 43.1
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 1.1e-18 97.4 151 37.7
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 2.4e-18 96.3 100 44.0
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 2.4e-18 96.3 116 37.9
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 2.7e-17 92.8 154 33.1
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 7.8e-17 91.3 104 42.3
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 1.0e-16 90.9 93 50.5
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 2.3e-16 89.7 131 38.2
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.6e-14 83.6 77 49.4
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 4.0e-13 79.0 121 43.8
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 6.9e-13 78.2 157 36.3
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 3.5e-09 65.9 63 46.0
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 6.0e-09 65.1 65 47.7
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 9.6e-07 57.8 64 40.6
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 1.3e-06 57.4 67 40.3


User provided reference genes

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