Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 2.3e-176 622.1 304 100.0
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 2.9e-123 445.7 275 77.8
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 5.5e-45 185.7 274 39.4
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 1.9e-42 177.2 262 38.2
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 2.5e-34 150.2 261 32.2
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 9.7e-34 148.3 266 33.1
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 1.6e-33 147.5 256 33.2
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 1.6e-33 147.5 270 33.7
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 3.7e-33 146.4 258 32.6
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 6.3e-33 145.6 270 33.0
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 8.2e-33 145.2 264 35.6
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 1.4e-32 144.4 261 33.7
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 1.8e-32 144.1 258 33.3
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 3.1e-32 143.3 260 32.3
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 3.1e-32 143.3 262 32.1
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 3.1e-32 143.3 257 33.1
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 3.1e-32 143.3 242 35.5
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 3.1e-32 143.3 242 34.3
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 5.3e-32 142.5 260 32.3
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 5.3e-32 142.5 260 32.3
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 9.0e-32 141.7 242 36.4
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 9.0e-32 141.7 260 33.5
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 9.0e-32 141.7 259 33.2
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 1.2e-31 141.4 258 34.9
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 1.2e-31 141.4 260 32.3
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 1.2e-31 141.4 248 33.1
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 1.5e-31 141.0 260 32.3
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 2.0e-31 140.6 276 32.6
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 3.4e-31 139.8 260 31.2
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 5.9e-31 139.0 257 32.3
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 5.9e-31 139.0 245 33.5
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 1.0e-30 138.3 255 33.7
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 2.2e-30 137.1 268 31.7
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 2.2e-30 137.1 265 30.6
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 2.2e-30 137.1 263 31.6
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 2.2e-30 137.1 244 33.2
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.9e-30 136.7 263 31.6
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 2.9e-30 136.7 242 33.9
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 3.8e-30 136.3 242 32.2
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 8.5e-30 135.2 245 34.3
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 1.4e-29 134.4 256 32.4
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 1.4e-29 134.4 260 30.8
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 3.2e-29 133.3 245 32.2
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 4.2e-29 132.9 263 31.9
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 4.2e-29 132.9 269 33.5
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 7.2e-29 132.1 237 33.3
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 7.2e-29 132.1 241 33.6
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 7.2e-29 132.1 247 30.8
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 9.4e-29 131.7 238 34.0
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 1.2e-28 131.3 245 31.0
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 1.2e-28 131.3 257 31.5
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 1.2e-28 131.3 254 31.5
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 1.6e-28 131.0 241 32.8
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 2.1e-28 130.6 247 30.8
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 4.6e-28 129.4 256 31.6
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 4.6e-28 129.4 238 33.2
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 6.1e-28 129.0 245 31.0
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 6.1e-28 129.0 263 30.4
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 7.9e-28 128.6 258 30.6
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 1.0e-27 128.3 258 31.8
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 1.8e-27 127.5 264 32.6
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 1.8e-27 127.5 273 30.8
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 3.9e-27 126.3 241 31.5
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 6.7e-27 125.6 242 32.6
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 6.7e-27 125.6 254 32.7
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 6.7e-27 125.6 243 31.3
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 8.8e-27 125.2 244 31.6
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 1.5e-26 124.4 243 31.7
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 7.4e-26 122.1 155 40.6
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 9.7e-26 121.7 250 32.0
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 1.7e-25 120.9 245 31.0
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 1.7e-25 120.9 238 31.5
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.8e-25 120.2 263 30.0
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 3.7e-25 119.8 241 29.5
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 8.2e-25 118.6 257 29.2
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 1.4e-24 117.9 264 31.4
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 2.4e-24 117.1 250 28.4
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 1.7e-17 94.4 116 44.8
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 1.4e-16 91.3 130 39.2
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 2.2e-14 84.0 254 27.6
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.8e-14 83.2 137 35.8
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 5.0e-14 82.8 131 37.4
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.2e-13 80.1 137 36.5
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.2e-12 78.2 133 34.6
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.6e-12 77.8 133 36.1
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.3e-11 73.9 131 34.4
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.3e-11 73.9 154 32.5
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 3.3e-10 70.1 247 23.1
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.3e-09 68.2 134 32.1
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.7e-09 67.8 193 28.5
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 5.9e-07 59.3 52 48.1
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 5.0e-06 56.2 40 50.0
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.0e-06 56.2 40 50.0
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 6.5e-06 55.8 63 44.4


User provided reference genes

Program Settings