Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c26_5160 Physcomitrium patens HOM05D006144 ORTHO05D006357 0.0e+00 2756.9 1436 100.0
Pp3c4_25960 Physcomitrium patens HOM05D006144 ORTHO05D006357 0.0e+00 1809.3 1445 68.8
Mapoly0063s0038 Marchantia polymorpha HOM05D006144 ORTHO05D006357 7.8e-49 200.7 608 29.8
Mapoly0063s0034 Marchantia polymorpha HOM05D006144 ORTHO05D006357 7.5e-44 184.1 590 29.0
SEGI_14166 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 3.0e-32 145.6 582 24.4
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 2.9e-27 129.0 422 26.8
Nitab4.5_0001684g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 9.2e-26 124.0 378 25.4
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 2.1e-25 122.9 451 25.7
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 2.7e-25 122.5 404 26.0
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 6.0e-25 121.3 382 28.5
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 7.8e-25 120.9 384 28.4
Sed0018548 Sechium edule HOM05D006144 ORTHO05D006357 1.0e-24 120.6 451 24.4
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 1.7e-24 119.8 385 27.5
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 2.3e-24 119.4 408 26.0
Nitab4.5_0000382g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 3.0e-24 119.0 379 26.1
MELO3C007550.2 Cucumis melo HOM05D006144 ORTHO05D006357 1.1e-23 117.1 448 24.3
CsaV3_6G043130 Cucumis sativus L. HOM05D006144 ORTHO05D006357 1.5e-23 116.7 448 24.6
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 1.5e-23 116.7 373 27.9
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 1.5e-23 116.7 383 28.7
Dinv29969 Davidia involucrata HOM05D006144 ORTHO05D006357 1.9e-23 116.3 398 27.1
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 3.3e-23 115.5 452 26.5
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 7.3e-23 114.4 421 25.4
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 9.5e-23 114.0 386 24.6
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 1.2e-22 113.6 407 27.3
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 1.6e-22 113.2 403 26.6
PGSC0003DMG400019754 Solanum tuberosum HOM05D006144 ORTHO05D006357 2.1e-22 112.8 373 25.5
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 3.6e-22 112.1 452 26.8
Peaxi162Scf00183g00711 Petunia axillaris HOM05D006144 ORTHO05D006357 3.6e-22 112.1 329 26.1
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 4.7e-22 111.7 423 25.3
Sopen03g008900 Solanum pennellii HOM05D006144 ORTHO05D006357 6.2e-22 111.3 366 24.6
Solyc03g044620.4 Solanum lycopersicum HOM05D006144 ORTHO05D006357 1.4e-21 110.2 366 24.9
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 1.4e-21 110.2 414 25.4
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 1.8e-21 109.8 392 26.8
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 2.3e-21 109.4 389 24.2
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 2.3e-21 109.4 396 25.3
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 3.1e-21 109.0 452 25.9
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 4.0e-21 108.6 379 24.8
ATR0104G015 Amborella trichopoda HOM05D006144 ORTHO05D006357 5.2e-21 108.2 419 24.1
Cpa.g.sc55.178 Carica papaya HOM05D006144 ORTHO05D006357 5.2e-21 108.2 379 26.4
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 5.2e-21 108.2 495 26.1
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 1.2e-20 107.1 374 25.1
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 1.2e-20 107.1 389 26.0
PGR102G0121 Punica granatum HOM05D006144 ORTHO05D006357 1.2e-20 107.1 358 27.4
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.5e-20 106.7 376 25.0
Eucgr.H01999 Eucalyptus grandis HOM05D006144 ORTHO05D006357 2.0e-20 106.3 358 27.4
TAR381G0606 Trochodendron aralioides HOM05D006144 ORTHO05D006357 2.0e-20 106.3 337 28.2
Os03g0186500 Oryza sativa ssp. japonica HOM05D006144 ORTHO05D006357 2.6e-20 105.9 385 25.2
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 3.4e-20 105.5 376 25.0
AUR62003855 Chenopodium quinoa HOM05D006144 ORTHO05D006357 5.8e-20 104.8 374 25.7
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 7.6e-20 104.4 445 24.3
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 9.9e-20 104.0 468 24.6
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 1.3e-19 103.6 371 25.6
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 1.7e-19 103.2 414 24.2
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 1.7e-19 103.2 383 25.6
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 3.8e-19 102.1 413 24.0
Sc03g0001430 Simmondsia chinensis HOM05D006144 ORTHO05D006357 3.8e-19 102.1 385 23.9
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 4.9e-19 101.7 330 26.7
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 4.1e-18 98.6 391 22.8
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 7.1e-18 97.8 372 24.7
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 9.2e-18 97.4 373 24.9
Lj4A140T30 Lonicera japonica HOM05D006144 ORTHO05D006357 1.2e-17 97.1 623 22.5
AUR62001952 Chenopodium quinoa HOM05D006144 ORTHO05D006357 2.1e-17 96.3 497 24.3
THA.LOC104826201 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 4.6e-17 95.1 371 24.0
SMO301G0037 Selaginella moellendorffii HOM05D006144 ORTHO05D006357 1.3e-16 93.6 387 24.5
Ah.03g144510 Amaranthus hybridus HOM05D006144 ORTHO05D006357 1.7e-16 93.2 371 25.1
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 2.3e-16 92.8 372 24.2
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 2.3e-16 92.8 373 24.1
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 6.6e-16 91.3 369 25.2
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 1.5e-15 90.1 363 25.1
HPP92_004081 Vanilla planifolia HOM05D006144 ORTHO05D006357 1.9e-15 89.7 377 23.6
HPP92_004109 Vanilla planifolia HOM05D006144 ORTHO05D006357 3.3e-15 89.0 377 23.6
Hund13563 Selenicereus undatus HOM05D006144 ORTHO05D006357 5.6e-15 88.2 408 22.5
SGA_v2.0_scaffold204G41590 Striga asiatica HOM05D006144 ORTHO05D006357 9.6e-15 87.4 390 23.8
THA.LOC104804508 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 3.6e-14 85.5 352 23.0
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 6.2e-14 84.7 305 25.9
Oeu003786.1 Olea europaea HOM05D006144 ORTHO05D006357 1.8e-13 83.2 378 25.1
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 9.0e-13 80.9 400 22.8
CBR_g31222 Chara braunii HOM05D006144 ORTHO05D006357 2.6e-12 79.3 387 24.0
MCO09G582 Micromonas commoda HOM05D006144 ORTHO05D006357 2.6e-12 79.3 369 23.8


User provided reference genes

Program Settings