Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c26_2830 Physcomitrium patens HOM05D004430 ORTHO05D005088 0.0e+00 2912.5 1818 100.0
Pp3c4_23740 Physcomitrium patens HOM05D004430 ORTHO05D005088 0.0e+00 1538.9 1896 55.9
Pp3c4_22960 Physcomitrium patens HOM05D004430 ORTHO05D005088 0.0e+00 1227.6 1871 48.8
Pp3c26_2670 Physcomitrium patens HOM05D004430 ORTHO05D005088 3.3e-97 361.7 240 99.2
Mapoly0057s0099 Marchantia polymorpha HOM05D004430 ORTHO05D005088 1.2e-78 300.1 1996 32.3
AagrBONN_evm.TU.Sc2ySwM_344.4397 Anthoceros agrestis HOM05D004430 ORTHO05D005088 3.6e-51 208.8 2082 28.0
Dinv20629 Davidia involucrata HOM05D004430 ORTHO05D005088 1.7e-29 136.7 508 32.7
Duzib068G0887 Durio zibethinus HOM05D004430 ORTHO05D005088 1.6e-27 130.2 483 32.3
Duzib205G1695 Durio zibethinus HOM05D004430 ORTHO05D005088 8.9e-26 124.4 489 32.7
SMO174G0145 Selaginella moellendorffii HOM05D004430 ORTHO05D005088 1.5e-25 123.6 534 35.6
Solyc03g112660.3 Solanum lycopersicum HOM05D004430 ORTHO05D005088 1.3e-24 120.6 523 30.6
Lsat_1_v5_gn_4_75700 Lactuca sativa HOM05D004430 ORTHO05D005088 2.2e-24 119.8 522 31.4
CsaV3_1G001360 Cucumis sativus L. HOM05D004430 ORTHO05D005088 2.9e-24 119.4 484 31.6
MELO3C026283.2 Cucumis melo HOM05D004430 ORTHO05D005088 8.4e-24 117.9 507 31.4
Medtr3g077440 Medicago truncatula HOM05D004430 ORTHO05D005088 8.4e-24 117.9 497 30.4
HanXRQChr11g0348291 Helianthus annuus HOM05D004430 ORTHO05D005088 1.1e-23 117.5 483 31.1
MBI10_g44384_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 1.1e-23 117.5 246 40.7
Nitab4.5_0001207g0060 Nicotiana tabacum HOM05D004430 ORTHO05D005088 2.7e-22 112.8 488 31.4
Sed0016557 Sechium edule HOM05D004430 ORTHO05D005088 4.6e-22 112.1 499 31.9
Dinv38562 Davidia involucrata HOM05D004430 ORTHO05D005088 6.0e-22 111.7 505 32.1
Nitab4.5_0003229g0080 Nicotiana tabacum HOM05D004430 ORTHO05D005088 6.0e-22 111.7 488 31.1
Sopen03g031740 Solanum pennellii HOM05D004430 ORTHO05D005088 6.0e-22 111.7 523 29.8
ClCG06G017130 Citrullus lanatus HOM05D004430 ORTHO05D005088 1.3e-21 110.5 473 30.7
HanXRQChr17g0548691 Helianthus annuus HOM05D004430 ORTHO05D005088 1.3e-21 110.5 512 35.0
CDE02G0036 Ceratophyllum demersum HOM05D004430 ORTHO05D005088 3.9e-21 109.0 263 35.7
Manes.06G107200 Manihot esculenta HOM05D004430 ORTHO05D005088 1.1e-20 107.5 488 36.1
Sp7g22670 Schrenkiella parvula HOM05D004430 ORTHO05D005088 2.5e-20 106.3 517 30.2
VMungo1215G2998 Vigna mungo HOM05D004430 ORTHO05D005088 2.5e-20 106.3 504 31.0
HPP92_024337 Vanilla planifolia HOM05D004430 ORTHO05D005088 3.3e-20 105.9 240 37.9
CSS0010843 Camellia sinensis var. sinensis HOM05D004430 ORTHO05D005088 4.3e-20 105.5 513 32.4
A01p16020 Brassica napus HOM05D004430 ORTHO05D005088 5.6e-20 105.1 504 29.2
BcaB03g12441 Brassica carinata HOM05D004430 ORTHO05D005088 7.3e-20 104.8 478 31.2
Potri.012G088500 Populus trichocarpa HOM05D004430 ORTHO05D005088 7.3e-20 104.8 507 29.2
BcaC06g32869 Brassica carinata HOM05D004430 ORTHO05D005088 9.6e-20 104.4 509 31.2
SGA_v2.0_scaffold7G04148 Striga asiatica HOM05D004430 ORTHO05D005088 9.6e-20 104.4 496 30.6
HPP92_006241 Vanilla planifolia HOM05D004430 ORTHO05D005088 1.6e-19 103.6 241 41.5
C01p20010 Brassica napus HOM05D004430 ORTHO05D005088 2.8e-19 102.8 507 29.2
FAN08G1542 Fragaria x ananassa HOM05D004430 ORTHO05D005088 2.8e-19 102.8 485 32.6
Haze_07543 Corylus avellana HOM05D004430 ORTHO05D005088 3.6e-19 102.4 234 38.0
ECA232G4503 Erigeron canadensis HOM05D004430 ORTHO05D005088 6.2e-19 101.7 482 35.9
Actinidia19112 Actinidia chinensis HOM05D004430 ORTHO05D005088 8.1e-19 101.3 338 31.7
Lalb_Chr13g0297721 Lupinus albus HOM05D004430 ORTHO05D005088 8.1e-19 101.3 517 30.8
CBR_g19277 Chara braunii HOM05D004430 ORTHO05D005088 1.4e-18 100.5 655 31.6
AL7G28520 Arabidopsis lyrata HOM05D004430 ORTHO05D005088 1.8e-18 100.1 478 29.1
BolC1t01928H Brassica oleracea HOM05D004430 ORTHO05D005088 1.8e-18 100.1 516 28.9
Sabra15G0104100 Salix brachista HOM05D004430 ORTHO05D005088 2.4e-18 99.8 517 29.8
Sed0007760 Sechium edule HOM05D004430 ORTHO05D005088 2.4e-18 99.8 405 31.6
C07p53740 Brassica napus HOM05D004430 ORTHO05D005088 3.1e-18 99.4 506 29.6
BraA01t01536Z Brassica rapa HOM05D004430 ORTHO05D005088 4.0e-18 99.0 511 28.6
Carub.0007s1638 Capsella rubella HOM05D004430 ORTHO05D005088 6.9e-18 98.2 473 30.4
Zm00001eb028710 Zea mays HOM05D004430 ORTHO05D005088 6.9e-18 98.2 505 30.7
BolC7t45865H Brassica oleracea HOM05D004430 ORTHO05D005088 2.0e-17 96.7 506 29.1
Thhalv10024213m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 2.0e-17 96.7 497 29.6
BcaC09g50842 Brassica carinata HOM05D004430 ORTHO05D005088 2.6e-17 96.3 496 28.0
Cpa.g.sc153.6 Carica papaya HOM05D004430 ORTHO05D005088 2.6e-17 96.3 224 38.4
A03p55450 Brassica napus HOM05D004430 ORTHO05D005088 9.9e-17 94.4 504 29.6
Thhalv10024214m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 9.9e-17 94.4 521 29.8
BraA03t14619Z Brassica rapa HOM05D004430 ORTHO05D005088 1.7e-16 93.6 504 29.2
Psat5g115080 Pisum sativum HOM05D004430 ORTHO05D005088 2.2e-16 93.2 495 28.5
CDE06G0437 Ceratophyllum demersum HOM05D004430 ORTHO05D005088 6.4e-16 91.7 455 27.7
Oeu024704.1 Olea europaea HOM05D004430 ORTHO05D005088 6.4e-16 91.7 508 27.4
TAR622G0342 Trochodendron aralioides HOM05D004430 ORTHO05D005088 1.4e-15 90.5 73 67.1
CAN.G1166.22 Capsicum annuum HOM05D004430 ORTHO05D005088 2.4e-15 89.7 493 28.0
Oeu036008.4 Olea europaea HOM05D004430 ORTHO05D005088 2.4e-15 89.7 529 28.7
Psat5g115040 Pisum sativum HOM05D004430 ORTHO05D005088 3.2e-15 89.4 501 29.7
Zm00001eb136860 Zea mays HOM05D004430 ORTHO05D005088 4.2e-15 89.0 481 29.9
SEGI_40513 Sequoiadendron giganteum HOM05D004430 ORTHO05D005088 9.3e-15 87.8 2083 24.5
Peaxi162Scf00089g00174 Petunia axillaris HOM05D004430 ORTHO05D005088 2.1e-14 86.7 502 28.1
HPP92_006251 Vanilla planifolia HOM05D004430 ORTHO05D005088 3.0e-13 82.8 473 32.6
HPP92_024330 Vanilla planifolia HOM05D004430 ORTHO05D005088 6.6e-13 81.6 71 63.4
ATR0757G157 Amborella trichopoda HOM05D004430 ORTHO05D005088 2.5e-12 79.7 1502 24.4
Medtr3g077450 Medicago truncatula HOM05D004430 ORTHO05D005088 9.6e-12 77.8 489 29.9
Sabra12G0063700 Salix brachista HOM05D004430 ORTHO05D005088 3.6e-11 75.9 537 28.3
Eucgr.B00248 Eucalyptus grandis HOM05D004430 ORTHO05D005088 2.6e-09 69.7 1533 24.8
Phvul.003G202300 Phaseolus vulgaris HOM05D004430 ORTHO05D005088 5.4e-07 62.0 489 27.2
SHI17143 Sapria himalayana HOM05D004430 ORTHO05D005088 9.3e-07 61.2 283 29.7


User provided reference genes

Program Settings