Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c26_180 Physcomitrium patens HOM05D005916 ORTHO05D007168 5.9e-90 334.3 188 100.0
Mapoly0098s0031 Marchantia polymorpha HOM05D005916 ORTHO05D007168 3.3e-56 222.2 156 67.9
Potri.015G110900 Populus trichocarpa HOM05D005916 ORTHO05D007168 1.4e-54 216.9 130 76.9
Sabra15G0132700 Salix brachista HOM05D005916 ORTHO05D007168 1.4e-54 216.9 130 76.9
MSTRG.8396 Avicennia marina HOM05D005916 ORTHO05D007168 1.8e-54 216.5 127 78.0
Prupe.2G269700 Prunus persica HOM05D005916 ORTHO05D007168 1.8e-54 216.5 138 73.2
Cc00_g13060 Coffea canephora HOM05D005916 ORTHO05D007168 5.2e-54 214.9 129 77.5
Migut.F01212 Erythranthe guttata HOM05D005916 ORTHO05D007168 5.2e-54 214.9 130 73.1
TPR.G26100 Trifolium pratense HOM05D005916 ORTHO05D007168 5.2e-54 214.9 134 73.9
MD01G1174300 Malus domestica HOM05D005916 ORTHO05D007168 6.8e-54 214.5 138 72.5
SGA_v2.0_scaffold136G34977 Striga asiatica HOM05D005916 ORTHO05D007168 6.8e-54 214.5 129 77.5
MD07G1241000 Malus domestica HOM05D005916 ORTHO05D007168 1.2e-53 213.8 136 73.5
CARHR192950 Cardamine hirsuta HOM05D005916 ORTHO05D007168 1.5e-53 213.4 128 74.2
Ciclev10032791m.g Citrus clementina HOM05D005916 ORTHO05D007168 1.5e-53 213.4 129 76.0
BolC2t06995H Brassica oleracea HOM05D005916 ORTHO05D007168 2.0e-53 213.0 126 77.0
EL10Ac5g12406 Beta vulgaris HOM05D005916 ORTHO05D007168 2.6e-53 212.6 145 69.7
SGA_v2.0_scaffold69G23310 Striga asiatica HOM05D005916 ORTHO05D007168 2.6e-53 212.6 129 76.0
DCAR_014647 Daucus carota HOM05D005916 ORTHO05D007168 3.4e-53 212.2 125 77.6
ATR1098G017 Amborella trichopoda HOM05D005916 ORTHO05D007168 4.4e-53 211.8 115 83.5
QL09p027336 Quercus lobata HOM05D005916 ORTHO05D007168 5.7e-53 211.5 125 77.6
Atru.chr6.1973 Acer truncatum HOM05D005916 ORTHO05D007168 7.5e-53 211.1 116 81.0
A02p05910 Brassica napus HOM05D005916 ORTHO05D007168 7.5e-53 211.1 125 76.8
BraA02t05543Z Brassica rapa HOM05D005916 ORTHO05D007168 7.5e-53 211.1 125 76.8
Dinv34531 Davidia involucrata HOM05D005916 ORTHO05D007168 7.5e-53 211.1 123 78.0
FvH4_7g26530 Fragaria vesca HOM05D005916 ORTHO05D007168 7.5e-53 211.1 116 81.0
FAN01G2833 Fragaria x ananassa HOM05D005916 ORTHO05D007168 7.5e-53 211.1 116 81.0
FAN06G3885 Fragaria x ananassa HOM05D005916 ORTHO05D007168 7.5e-53 211.1 116 81.0
FAN10G1904 Fragaria x ananassa HOM05D005916 ORTHO05D007168 7.5e-53 211.1 116 81.0
BNapus_Darmor_BZH_scaffold_38p01960 Brassica napus HOM05D005916 ORTHO05D007168 9.8e-53 210.7 125 76.8
CDE06G1827 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 1.3e-52 210.3 122 80.3
MBI04_g13855_MAGBIO Magnolia biondii HOM05D005916 ORTHO05D007168 1.3e-52 210.3 115 81.7
Potri.012G113400 Populus trichocarpa HOM05D005916 ORTHO05D007168 1.7e-52 209.9 129 74.4
RcHm_v2.0_Chr1g0373201 Rosa chinensis HOM05D005916 ORTHO05D007168 1.7e-52 209.9 116 80.2
CsaV3_4G004400 Cucumis sativus L. HOM05D005916 ORTHO05D007168 2.2e-52 209.5 125 76.8
PSO782G0331 Papaver somniferum HOM05D005916 ORTHO05D007168 2.2e-52 209.5 123 76.4
Carub.0006s1828 Capsella rubella HOM05D005916 ORTHO05D007168 3.7e-52 208.8 134 72.4
Thhalv10014735m.g Eutrema salsugineum HOM05D005916 ORTHO05D007168 3.7e-52 208.8 121 76.0
Glyma.10G242500 Glycine max HOM05D005916 ORTHO05D007168 3.7e-52 208.8 138 70.3
Glyma.20G151600 Glycine max HOM05D005916 ORTHO05D007168 3.7e-52 208.8 138 70.3
Oeu046440.1 Olea europaea HOM05D005916 ORTHO05D007168 3.7e-52 208.8 125 76.0
VMungo0720G1184 Vigna mungo HOM05D005916 ORTHO05D007168 3.7e-52 208.8 125 76.8
BcaB08g36557 Brassica carinata HOM05D005916 ORTHO05D007168 4.9e-52 208.4 129 73.6
Phvul.007G063000 Phaseolus vulgaris HOM05D005916 ORTHO05D007168 4.9e-52 208.4 128 75.0
Sp6g24470 Schrenkiella parvula HOM05D005916 ORTHO05D007168 4.9e-52 208.4 134 72.4
BcaC04g19397 Brassica carinata HOM05D005916 ORTHO05D007168 6.4e-52 208.0 129 72.9
BolC9t58480H Brassica oleracea HOM05D003971 ORTHO05D004762 6.4e-52 208.0 129 72.9
Hund13383 Selenicereus undatus HOM05D005916 ORTHO05D007168 6.4e-52 208.0 126 76.2
CANSAT56G4429 Cannabis sativa HOM05D005916 ORTHO05D007168 8.3e-52 207.6 116 80.2
Psat6g202080 Pisum sativum HOM05D005916 ORTHO05D007168 8.3e-52 207.6 131 72.5
TWI39G0778 Tripterygium wilfordii HOM05D005916 ORTHO05D007168 8.3e-52 207.6 122 77.9
arahy.Tifrunner.gnm1.ann1.7NV6YZ Arachis hypogaea HOM05D005916 ORTHO05D007168 1.1e-51 207.2 116 80.2
arahy.Tifrunner.gnm1.ann1.VH0MPJ Arachis hypogaea HOM05D005916 ORTHO05D007168 1.1e-51 207.2 116 80.2
Gorai.001G052400 Gossypium raimondii HOM05D005916 ORTHO05D007168 1.1e-51 207.2 129 73.6
Lj5g0003841 Lotus japonicus HOM05D005916 ORTHO05D007168 1.1e-51 207.2 116 80.2
PSO675G3127 Papaver somniferum HOM05D005916 ORTHO05D007168 1.1e-51 207.2 116 79.3
Sc17g0004780 Simmondsia chinensis HOM05D005916 ORTHO05D007168 1.1e-51 207.2 116 80.2
CSS0012195 Camellia sinensis var. sinensis HOM05D005916 ORTHO05D007168 1.4e-51 206.8 124 77.4
Nitab4.5_0000103g0220 Nicotiana tabacum HOM05D005916 ORTHO05D007168 1.4e-51 206.8 121 77.7
PSO063G1306 Papaver somniferum HOM05D005916 ORTHO05D007168 1.4e-51 206.8 123 75.6
THA.LOC104799659 Tarenaya hassleriana HOM05D005916 ORTHO05D007168 1.4e-51 206.8 116 78.4
HPP92_020684 Vanilla planifolia HOM05D005916 ORTHO05D007168 1.4e-51 206.8 137 69.3
PSO541G5205 Papaver somniferum HOM05D005916 ORTHO05D007168 1.8e-51 206.5 116 78.4
AL6G31440 Arabidopsis lyrata HOM05D005916 ORTHO05D007168 2.4e-51 206.1 121 75.2
MELO3C017626.2 Cucumis melo HOM05D005916 ORTHO05D007168 2.4e-51 206.1 136 71.3
Gohir.D07G049300 Gossypium hirsutum HOM05D005916 ORTHO05D007168 2.4e-51 206.1 129 73.6
Medtr1g102540 Medicago truncatula HOM05D005916 ORTHO05D007168 2.4e-51 206.1 125 76.0
Aqoxy3G02650 Aquilegia oxysepala HOM05D005916 ORTHO05D007168 3.2e-51 205.7 116 79.3
Sed0012421 Sechium edule HOM05D001364 ORTHO05D007168 3.2e-51 205.7 125 76.0
Ca_10837_v3 Cicer arietinum L. HOM05D005916 ORTHO05D007168 4.1e-51 205.3 131 71.8
Manes.06G129600 Manihot esculenta HOM05D005916 ORTHO05D007168 5.4e-51 204.9 127 74.8
PGR083G1688 Punica granatum HOM05D005916 ORTHO05D007168 5.4e-51 204.9 113 80.5
C09p56130 Brassica napus HOM05D003971 ORTHO05D004762 7.0e-51 204.5 129 72.1
Solyc03g094030.4 Solanum lycopersicum HOM05D005916 ORTHO05D007168 7.0e-51 204.5 129 73.6
PGSC0003DMG403008332 Solanum tuberosum HOM05D005916 ORTHO05D007168 7.0e-51 204.5 129 73.6
Thecc.03G145100 Theobroma cacao HOM05D005916 ORTHO05D007168 7.0e-51 204.5 129 72.9
ClCG07G017200 Citrullus lanatus HOM05D005916 ORTHO05D007168 9.2e-51 204.1 129 73.6
Sopen03g024920 Solanum pennellii HOM05D005916 ORTHO05D007168 9.2e-51 204.1 118 78.0
AT5G19910 Arabidopsis thaliana HOM05D005916 ORTHO05D007168 1.2e-50 203.8 121 76.0
Gohir.A07G044800 Gossypium hirsutum HOM05D005916 ORTHO05D007168 1.2e-50 203.8 122 76.2
FvH4_5g39330 Fragaria vesca HOM05D005916 ORTHO05D007168 1.6e-50 203.4 139 68.3
FAN08G1750 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.6e-50 203.4 139 68.3
Zm00001eb038950 Zea mays HOM05D005916 ORTHO05D007168 1.6e-50 203.4 130 73.1
GSVIVG01024482001 Vitis vinifera HOM05D005916 ORTHO05D007168 2.0e-50 203.0 126 73.8
Cpa.g.sc13.218 Carica papaya HOM05D005916 ORTHO05D007168 2.7e-50 202.6 116 78.4
AUR62029119 Chenopodium quinoa HOM05D005916 ORTHO05D007168 2.7e-50 202.6 123 75.6
COL.COLO4_37304 Corchorus olitorius HOM05D005916 ORTHO05D007168 2.7e-50 202.6 129 72.1
Nn6g33759 Nelumbo nucifera HOM05D005916 ORTHO05D007168 2.7e-50 202.6 113 79.6
Eucgr.A02936 Eucalyptus grandis HOM05D005916 ORTHO05D007168 7.8e-50 201.1 130 70.8
Aa31LG2G19640 Aethionema arabicum HOM05D005916 ORTHO05D007168 1.3e-49 200.3 118 74.6
vmacro09932 Vaccinium macrocarpon HOM05D005916 ORTHO05D007168 1.3e-49 200.3 134 70.1
FAN18G1579 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.7e-49 199.9 139 67.6
ECA233G3320 Erigeron canadensis HOM05D005916 ORTHO05D007168 2.3e-49 199.5 116 77.6
Os07g0164600 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 2.3e-49 199.5 126 73.8
Os10g0564100 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 3.9e-49 198.7 111 79.3
Lsat_1_v5_gn_8_11541 Lactuca sativa HOM05D005916 ORTHO05D007168 5.0e-49 198.4 129 71.3
AagrBONN_evm.TU.Sc2ySwM_362.2892 Anthoceros agrestis HOM05D005916 ORTHO05D007168 1.1e-48 197.2 156 69.9
Haze_22228 Corylus avellana HOM05D005916 ORTHO05D007168 1.5e-48 196.8 128 70.3
FAN25G1847 Fragaria x ananassa HOM05D005916 ORTHO05D007168 3.3e-48 195.7 116 75.9
Ah.01g021910 Amaranthus hybridus HOM05D005916 ORTHO05D007168 5.6e-48 194.9 116 76.7
HanXRQChr08g0223361 Helianthus annuus HOM05D005916 ORTHO05D007168 5.6e-48 194.9 114 77.2
Atru.chr6.592 Acer truncatum HOM05D005916 ORTHO05D007168 1.2e-47 193.7 116 74.1
HanXRQChr03g0069461 Helianthus annuus HOM05D005916 ORTHO05D007168 2.1e-47 193.0 126 71.4
Lalb_Chr24g0402981 Lupinus albus HOM05D005916 ORTHO05D007168 2.1e-47 193.0 116 75.0
Nitab4.5_0003429g0010 Nicotiana tabacum HOM05D005916 ORTHO05D007168 2.1e-47 193.0 121 73.6
QL02p099223 Quercus lobata HOM05D005916 ORTHO05D007168 2.1e-47 193.0 112 74.1
TPR.G9644 Trifolium pratense HOM05D005916 ORTHO05D007168 2.3e-46 189.5 114 74.6
EL10Ac9g22675 Beta vulgaris HOM05D005916 ORTHO05D007168 1.7e-44 183.3 127 68.5
CDE06G2153 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 1.6e-42 176.8 122 69.7
Dinv21889 Davidia involucrata HOM05D005916 ORTHO05D007168 6.0e-42 174.9 117 70.1
CiPaw.07G182800 Carya illinoinensis HOM05D005916 ORTHO05D007168 7.8e-42 174.5 125 67.2
CAN.G297.9 Capsicum annuum HOM05D005916 ORTHO05D007168 3.9e-41 172.2 133 64.7
Hma1.2p1_1014F.1_g247870 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 8.9e-38 161.0 131 64.9
Lj8A49T46 Lonicera japonica HOM05D005916 ORTHO05D007168 1.2e-37 160.6 88 79.5
SEGI_39874 Sequoiadendron giganteum HOM05D005916 ORTHO05D007168 4.4e-37 158.7 99 73.7
Hma1.2p1_1014F.1_g247880 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 8.3e-36 154.5 87 78.2
AUR62015003 Chenopodium quinoa HOM05D005916 ORTHO05D007168 1.9e-35 153.3 96 72.9
CAN.G706.26 Capsicum annuum HOM05D005916 ORTHO05D007168 4.1e-35 152.1 91 74.7
SalBow2G2523 Salvia bowleyana HOM05D005916 ORTHO05D007168 4.6e-34 148.7 92 71.7
Rhsim09G0188200 Rhododendron simsii HOM05D001364 ORTHO05D001316 3.3e-32 142.5 127 56.7
SMO197G0072 Selaginella moellendorffii HOM05D005916 ORTHO05D007168 1.2e-31 140.6 82 78.0
PRCOL_00001580 Prasinoderma coloniale HOM05D005916 ORTHO05D007168 4.4e-29 132.1 101 56.4
Pp3c13_24550 Physcomitrium patens HOM05D005916 ORTHO05D007168 2.1e-26 123.2 100 60.0
MCO04G185 Micromonas commoda HOM05D005916 ORTHO05D007168 1.9e-24 116.7 93 57.0
Dinv34527 Davidia involucrata HOM05D005916 ORTHO05D007168 9.9e-21 104.4 59 74.6
Peaxi162Scf00073g01818 Petunia axillaris HOM05D005916 ORTHO05D007168 1.2e-18 97.4 55 78.2
unitig_90.g27553 Utricularia gibba HOM05D005916 ORTHO05D007168 4.6e-18 95.5 53 77.4
Actinidia31761 Actinidia chinensis HOM05D005916 ORTHO05D007168 3.3e-16 89.4 87 51.7
CBR_g3263 Chara braunii HOM05D000019 ORTHO05D000353 4.3e-16 89.0 89 51.7
FAN21G1143 Fragaria x ananassa HOM05D005916 ORTHO05D007168 4.2e-11 72.4 41 78.0
Cre12.g520850 Chlamydomonas reinhardtii HOM05D005916 ORTHO05D007168 1.6e-10 70.5 102 38.2
Actinidia01032 Actinidia chinensis HOM05D005916 ORTHO05D007168 3.3e-08 62.8 43 72.1
SalBow2G0368 Salvia bowleyana HOM05D005916 ORTHO05D007168 7.4e-08 61.6 47 66.0
Cfa025999 Carpinus fangiana HOM05D005916 ORTHO05D007168 9.6e-08 61.2 83 43.4
PGSC0003DMG401008332 Solanum tuberosum HOM05D005916 ORTHO05D007168 9.0e-06 54.7 36 66.7


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