Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 0.0e+00 1907.5 972 100.0
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 1.2e-178 631.3 646 54.2
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 7.1e-147 525.8 527 53.5
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 4.3e-120 436.8 540 46.1
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 6.9e-118 429.5 632 41.5
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 2.0e-117 427.9 450 50.2
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 2.2e-116 424.5 563 43.3
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 2.2e-116 424.5 563 42.6
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 3.8e-116 423.7 623 40.9
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.2e-115 420.6 513 45.6
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 3.2e-115 420.6 519 46.2
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 4.2e-115 420.2 537 44.3
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 7.2e-115 419.5 513 46.2
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.2e-114 418.7 513 45.8
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.6e-114 418.3 513 46.0
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 1.6e-114 418.3 644 40.2
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 1.6e-114 418.3 516 44.6
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.7e-114 417.5 532 44.5
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 2.7e-114 417.5 516 44.6
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.0e-113 415.6 566 43.1
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 1.8e-113 414.8 512 45.5
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 5.1e-113 413.3 541 44.2
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 1.5e-112 411.8 548 42.7
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 2.6e-112 411.0 518 43.8
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 2.6e-112 411.0 543 44.2
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 2.6e-112 411.0 555 41.4
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 7.4e-112 409.5 528 43.2
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 1.7e-111 408.3 522 42.7
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 2.8e-111 407.5 595 40.8
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 3.7e-111 407.1 555 41.1
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 6.3e-111 406.4 517 44.5
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 1.1e-110 405.6 547 43.0
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 1.8e-110 404.8 563 42.5
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 2.4e-110 404.4 596 40.1
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 4.1e-110 403.7 592 40.2
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 5.3e-110 403.3 548 42.5
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 1.2e-109 402.1 559 41.1
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 2.0e-109 401.4 559 41.1
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 4.5e-109 400.2 544 42.3
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 1.0e-108 399.1 604 41.7
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 1.3e-108 398.7 597 40.7
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 1.3e-108 398.7 532 42.1
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 1.7e-108 398.3 596 40.8
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 1.7e-108 398.3 526 43.7
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 2.2e-108 397.9 642 39.4
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 3.8e-108 397.1 602 40.7
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 3.8e-108 397.1 517 43.9
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 1.5e-107 395.2 593 41.7
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 1.9e-107 394.8 589 41.1
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 4.2e-107 393.7 595 41.2
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 4.2e-107 393.7 525 43.4
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 5.5e-107 393.3 549 41.7
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 7.2e-107 392.9 689 36.7
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 7.2e-107 392.9 589 41.1
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 7.2e-107 392.9 589 40.9
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 9.4e-107 392.5 569 41.5
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 1.6e-106 391.7 662 38.1
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.6e-106 391.7 633 39.5
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 2.1e-106 391.3 553 41.2
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 1.0e-105 389.0 514 42.6
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 1.4e-105 388.7 523 41.9
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 2.3e-105 387.9 517 43.1
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 2.3e-105 387.9 600 39.7
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 5.2e-105 386.7 511 45.2
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 5.2e-105 386.7 525 42.5
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 5.2e-105 386.7 748 36.0
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 1.1e-104 385.6 646 39.2
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 1.1e-104 385.6 517 42.4
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 1.1e-104 385.6 599 39.9
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 1.1e-104 385.6 535 43.4
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.6e-104 384.4 748 35.8
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 3.3e-104 384.0 550 41.5
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 3.3e-104 384.0 603 39.6
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 4.4e-104 383.6 515 42.5
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 5.7e-104 383.3 533 40.3
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 7.5e-104 382.9 540 41.9
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 1.7e-103 381.7 516 42.8
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 1.7e-103 381.7 516 42.8
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 2.2e-103 381.3 516 43.2
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 3.7e-103 380.6 516 43.0
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 3.7e-103 380.6 515 42.5
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 3.7e-103 380.6 515 42.3
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 8.2e-103 379.4 595 41.0
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 8.2e-103 379.4 516 42.4
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 8.2e-103 379.4 593 39.1
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 8.2e-103 379.4 515 41.9
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 1.4e-102 378.6 490 44.3
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 5.3e-102 376.7 547 41.9
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 5.3e-102 376.7 516 41.3
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 5.3e-102 376.7 596 39.6
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 7.0e-102 376.3 523 41.9
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 2.0e-101 374.8 555 41.3
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 4.5e-101 373.6 716 36.6
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 5.9e-101 373.2 591 39.4
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 1.7e-100 371.7 557 41.5
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 1.1e-99 369.0 517 42.7
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 4.2e-99 367.1 489 41.7
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 1.6e-98 365.2 513 42.3
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 2.3e-97 361.3 561 39.8
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 2.3e-97 361.3 695 36.1
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 6.8e-97 359.8 504 42.9
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 1.2e-96 359.0 513 41.5
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 3.7e-95 354.0 480 44.2
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 8.0e-82 309.7 442 41.2
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 2.9e-71 274.6 400 40.8
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 1.5e-67 262.3 238 50.0
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.1e-62 246.1 545 32.8
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 1.4e-62 245.7 531 34.7
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.1e-59 236.1 513 32.9
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 1.1e-57 229.6 789 26.1
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 3.8e-55 221.1 364 40.7
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 9.0e-41 173.3 357 35.3
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 9.0e-41 173.3 148 54.1
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 4.6e-37 161.0 195 45.6
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 6.7e-36 157.1 348 30.7
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 2.1e-29 135.6 201 44.3
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 6.0e-29 134.0 184 45.1
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 6.0e-21 107.5 165 41.2
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 1.6e-18 99.4 205 34.1
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 2.5e-11 75.5 117 41.9
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 9.1e-09 67.0 81 44.4


User provided reference genes

Program Settings