Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c26_11390 Physcomitrium patens HOM05D006624 ORTHO05D008209 2.2e-213 745.3 371 100.0
Mapoly0037s0054 Marchantia polymorpha HOM05D006624 ORTHO05D008209 1.2e-70 271.2 364 42.0
COL.COLO4_17108 Corchorus olitorius HOM05D000087 ORTHO05D008209 1.9e-60 237.3 351 38.5
Gorai.003G180000 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.5e-60 236.9 346 39.9
Rhsim07G0122500 Rhododendron simsii HOM05D006624 ORTHO05D008209 9.6e-60 235.0 316 41.5
QL12p007008 Quercus lobata HOM05D006624 ORTHO05D008209 2.8e-59 233.4 312 40.7
Duzib068G0530 Durio zibethinus HOM05D006624 ORTHO05D008209 3.6e-59 233.0 316 40.5
Gohir.A03G002600 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.4e-58 231.1 358 38.5
Manes.17G019300 Manihot esculenta HOM05D006624 ORTHO05D008209 1.8e-58 230.7 346 37.3
CsaV3_3G049520 Cucumis sativus L. HOM05D006624 ORTHO05D008209 5.3e-58 229.2 317 40.1
TWI15G0738 Tripterygium wilfordii HOM05D006624 ORTHO05D008209 5.3e-58 229.2 310 40.0
CSS0000809 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 9.0e-58 228.4 365 39.2
Aqoxy7G00644 Aquilegia oxysepala HOM05D006624 ORTHO05D008209 1.2e-57 228.0 320 39.7
CiPaw.11G087800 Carya illinoinensis HOM05D006624 ORTHO05D008209 1.2e-57 228.0 358 38.3
SGA_v2.0_scaffold36G14316 Striga asiatica HOM05D006624 ORTHO05D008209 1.2e-57 228.0 322 39.4
TAR629G2579 Trochodendron aralioides HOM05D006624 ORTHO05D008209 1.5e-57 227.6 361 38.8
CSS0049781 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 2.0e-57 227.3 365 39.2
Actinidia10881 Actinidia chinensis HOM05D006624 ORTHO05D008209 3.4e-57 226.5 359 38.2
MD06G1040000 Malus domestica HOM05D006624 ORTHO05D008209 3.4e-57 226.5 356 38.2
Ciclev10031769m.g Citrus clementina HOM05D006624 ORTHO05D008209 4.5e-57 226.1 325 38.2
ClCG09G012360 Citrullus lanatus HOM05D006624 ORTHO05D008209 1.3e-56 224.6 312 39.7
Prupe.5G046100 Prunus persica HOM05D006624 ORTHO05D008209 1.3e-56 224.6 315 40.6
THA.LOC104827742 Tarenaya hassleriana HOM05D006624 ORTHO05D008209 1.3e-56 224.6 306 38.6
Gohir.D03G169701 Gossypium hirsutum HOM05D006624 ORTHO05D008209 6.4e-56 222.2 270 43.7
Solyc08g077250.4 Solanum lycopersicum HOM05D006624 ORTHO05D008209 6.4e-56 222.2 318 37.1
Actinidia31470 Actinidia chinensis HOM05D006624 ORTHO05D008209 8.4e-56 221.9 364 36.8
RcHm_v2.0_Chr7g0208351 Rosa chinensis HOM05D006624 ORTHO05D008209 2.4e-55 220.3 318 37.4
Dinv25186 Davidia involucrata HOM05D006624 ORTHO05D008209 4.2e-55 219.5 361 36.3
Sed0020690 Sechium edule HOM05D006624 ORTHO05D008209 4.2e-55 219.5 357 37.0
Migut.N01377 Erythranthe guttata HOM05D006624 ORTHO05D008209 5.4e-55 219.2 320 38.8
TPR.G21431 Trifolium pratense HOM05D006624 ORTHO05D008209 5.4e-55 219.2 316 38.9
GSVIVG01013232001 Vitis vinifera HOM05D006624 ORTHO05D008209 5.4e-55 219.2 350 36.9
PGSC0003DMG400024215 Solanum tuberosum HOM05D006624 ORTHO05D008209 7.1e-55 218.8 318 36.8
Psat2g174640 Pisum sativum HOM05D006624 ORTHO05D008209 1.2e-54 218.0 317 38.8
MSTRG.12153 Avicennia marina HOM05D006624 ORTHO05D008209 1.6e-54 217.6 317 39.4
A06p45890 Brassica napus HOM05D006624 ORTHO05D008209 1.6e-54 217.6 354 36.2
BraA06t27456Z Brassica rapa HOM05D006624 ORTHO05D008209 1.6e-54 217.6 354 35.6
HanXRQChr08g0227961 Helianthus annuus HOM05D006624 ORTHO05D008209 1.6e-54 217.6 350 37.7
Nitab4.5_0004327g0020 Nicotiana tabacum HOM05D006624 ORTHO05D008209 2.1e-54 217.2 318 37.1
Sc01g0007740 Simmondsia chinensis HOM05D006624 ORTHO05D008209 2.1e-54 217.2 317 37.2
Lalb_Chr16g0379211 Lupinus albus HOM05D006624 ORTHO05D008209 2.7e-54 216.9 318 38.1
PGR042G3682 Punica granatum HOM05D006624 ORTHO05D008209 3.5e-54 216.5 352 35.8
Medtr5g014010 Medicago truncatula HOM05D006624 ORTHO05D008209 4.6e-54 216.1 340 37.1
Sabra01G0115200 Salix brachista HOM05D006624 ORTHO05D008209 6.0e-54 215.7 346 37.3
PSO339G2002 Papaver somniferum HOM05D006624 ORTHO05D008209 7.9e-54 215.3 367 38.7
Eucgr.E00310 Eucalyptus grandis HOM05D006624 ORTHO05D008209 1.0e-53 214.9 347 37.2
Lj2g0021367 Lotus japonicus HOM05D006624 ORTHO05D008209 1.3e-53 214.5 315 38.1
Sopen08g025830 Solanum pennellii HOM05D006624 ORTHO05D008209 1.3e-53 214.5 360 34.2
BcaC06g31468 Brassica carinata HOM05D006624 ORTHO05D008209 1.8e-53 214.2 359 36.8
Aa31LG9G6360 Aethionema arabicum HOM05D006624 ORTHO05D008209 3.0e-53 213.4 306 38.2
Potri.001G146500 Populus trichocarpa HOM05D006624 ORTHO05D008209 3.0e-53 213.4 343 36.7
ATR1101G009 Amborella trichopoda HOM05D006624 ORTHO05D008209 3.9e-53 213.0 323 37.8
FvH4_5g21210 Fragaria vesca HOM05D006624 ORTHO05D008209 1.1e-52 211.5 315 36.5
Haze_08295 Corylus avellana HOM05D006624 ORTHO05D008209 1.5e-52 211.1 315 38.7
MELO3C003374.2 Cucumis melo HOM05D006624 ORTHO05D008209 2.5e-52 210.3 316 37.3
BcaC06g34373 Brassica carinata HOM05D006624 ORTHO05D008209 4.3e-52 209.5 355 36.3
Atru.chr6.1770 Acer truncatum HOM05D006624 ORTHO05D008209 5.6e-52 209.1 319 37.0
CAN.G799.14 Capsicum annuum HOM05D006624 ORTHO05D008209 5.6e-52 209.1 359 35.7
BolC7t43526H Brassica oleracea HOM05D006624 ORTHO05D008209 7.4e-52 208.8 355 36.1
FAN04G0639 Fragaria x ananassa HOM05D006624 ORTHO05D008209 7.4e-52 208.8 315 35.6
Cc08_g02070 Coffea canephora HOM05D006624 ORTHO05D008209 9.6e-52 208.4 327 37.6
Glyma.11G041200 Glycine max HOM05D006624 ORTHO05D008209 9.6e-52 208.4 314 38.5
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 9.6e-52 208.4 312 39.1
ECA233G2124 Erigeron canadensis HOM05D006624 ORTHO05D008209 1.3e-51 208.0 358 34.6
Phvul.002G004700 Phaseolus vulgaris HOM05D006624 ORTHO05D008209 2.1e-51 207.2 330 37.3
Nitab4.5_0002055g0180 Nicotiana tabacum HOM05D006624 ORTHO05D008209 2.8e-51 206.8 361 34.1
Thecc.03G233800 Theobroma cacao HOM05D006624 ORTHO05D008209 2.8e-51 206.8 335 40.0
C07p29750 Brassica napus HOM05D006624 ORTHO05D008209 4.8e-51 206.1 358 35.5
CDE04G3153 Ceratophyllum demersum HOM05D006624 ORTHO05D008209 4.8e-51 206.1 293 37.5
Glyma.01G200900 Glycine max HOM05D006624 ORTHO05D008209 6.2e-51 205.7 275 41.1
arahy.Tifrunner.gnm1.ann1.A7V6P3 Arachis hypogaea HOM05D006624 ORTHO05D008209 5.3e-50 202.6 329 34.3
PSO565G0001 Papaver somniferum HOM05D006624 ORTHO05D008209 5.3e-50 202.6 375 37.6
VMungo1215G2954 Vigna mungo HOM05D006624 ORTHO05D008209 5.3e-50 202.6 328 36.3
Carub.0008s0136 Capsella rubella HOM05D006624 ORTHO05D008209 6.9e-50 202.2 319 38.2
Zm00001eb000170 Zea mays HOM05D006624 ORTHO05D008209 9.0e-50 201.8 310 36.5
Ah.07g200030 Amaranthus hybridus HOM05D006624 ORTHO05D008209 1.2e-49 201.4 311 35.0
Hund14427 Selenicereus undatus HOM05D006624 ORTHO05D008209 1.5e-49 201.1 315 33.7
FAN08G0242 Fragaria x ananassa HOM05D006624 ORTHO05D008209 2.0e-49 200.7 327 34.6
SEGI_35168 Sequoiadendron giganteum HOM05D006624 ORTHO05D008209 2.6e-49 200.3 309 37.5
arahy.Tifrunner.gnm1.ann1.76B0S0 Arachis hypogaea HOM05D006624 ORTHO05D008209 3.4e-49 199.9 336 33.6
AL8G11790 Arabidopsis lyrata HOM05D006624 ORTHO05D008209 9.9e-49 198.4 353 36.0
vmacro14109 Vaccinium macrocarpon HOM05D006624 ORTHO05D008209 2.2e-48 197.2 437 32.0
AUR62018767 Chenopodium quinoa HOM05D006624 ORTHO05D008209 2.9e-48 196.8 306 36.9
DCAR_031785 Daucus carota HOM05D006624 ORTHO05D008209 4.9e-48 196.1 354 35.3
EL10Ac5g12192 Beta vulgaris HOM05D006624 ORTHO05D008209 4.2e-47 193.0 308 35.4
AUR62007233 Chenopodium quinoa HOM05D006624 ORTHO05D008209 6.0e-46 189.1 351 35.0
AT5G46560 Arabidopsis thaliana HOM05D006624 ORTHO05D008209 7.9e-46 188.7 348 35.9
Lsat_1_v5_gn_6_68241 Lactuca sativa HOM05D006624 ORTHO05D008209 2.3e-45 187.2 310 36.8
FAN18G2886 Fragaria x ananassa HOM05D006624 ORTHO05D008209 2.6e-41 173.7 346 32.9
SalBow6G4456 Salvia bowleyana HOM05D006624 ORTHO05D008209 1.2e-38 164.9 446 28.3
Cpa.g.sc6.412 Carica papaya HOM05D006624 ORTHO05D008209 6.7e-37 159.1 221 40.7
Thhalv10000965m.g Eutrema salsugineum HOM05D006624 ORTHO05D008209 4.3e-36 156.4 318 32.1
AagrBONN_evm.TU.Sc2ySwM_362.2673 Anthoceros agrestis HOM05D006624 ORTHO05D008209 2.1e-35 154.1 213 39.0
CBR_g18557 Chara braunii HOM05D006624 ORTHO05D008209 6.3e-35 152.5 272 34.6
Lj2A246G27 Lonicera japonica HOM05D006624 ORTHO05D008209 2.6e-33 147.1 270 35.9
Ca_24634_v3 Cicer arietinum L. HOM05D006624 ORTHO05D008209 5.9e-33 146.0 163 47.9
Hma1.2p1_3049F.1_g332130 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 3.2e-31 140.2 298 32.9
FAN13G3188 Fragaria x ananassa HOM05D006624 ORTHO05D008209 4.2e-31 139.8 171 42.1
Peaxi162Scf00084g00925 Petunia axillaris HOM05D006624 ORTHO05D008209 2.1e-30 137.5 187 40.1
MBI04_g31972_MAGBIO Magnolia biondii HOM05D006624 ORTHO05D008209 6.7e-29 132.5 263 33.5
QL12p007029 Quercus lobata HOM05D006624 ORTHO05D008209 7.4e-28 129.0 232 31.9
Gorai.001G276000 Gossypium raimondii HOM05D006624 ORTHO05D008209 3.8e-24 116.7 258 31.0
Hma1.2p1_3049F.1_g332131 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.1e-23 115.2 99 58.6
CARHR175020 Cardamine hirsuta HOM05D006624 ORTHO05D008209 5.1e-21 106.3 226 29.2
SpUn0632_0010 Schrenkiella parvula HOM05D006624 ORTHO05D008209 1.1e-18 98.6 225 31.6
Gorai.004G193000 Gossypium raimondii HOM05D006624 ORTHO05D008209 7.7e-17 92.4 218 27.1
Gorai.013G102100 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.7e-14 84.0 129 32.6
Hma1.2p1_0414F.1_g147760 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 8.8e-13 79.0 157 33.1
Peaxi162Scf00084g00918 Petunia axillaris HOM05D006624 ORTHO05D008209 4.1e-10 70.1 130 36.9
CBR_g30426 Chara braunii HOM05D006624 ORTHO05D008209 5.0e-08 63.2 44 56.8
Duzib084G0908 Durio zibethinus HOM05D006624 ORTHO05D008209 3.6e-06 57.0 106 25.5


User provided reference genes

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