Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c25_6660 Physcomitrium patens HOM05D007052 ORTHO05D008871 1.9e-113 412.5 210 100.0
Ca_00688_v3 Cicer arietinum L. HOM05D007052 ORTHO05D008871 1.4e-44 183.7 125 72.0
Medtr2g024300 Medicago truncatula HOM05D007052 ORTHO05D008871 1.4e-44 183.7 125 72.0
TPR.G13090 Trifolium pratense HOM05D007052 ORTHO05D008871 3.2e-44 182.6 125 72.0
TWI38G1879 Tripterygium wilfordii HOM05D007052 ORTHO05D008871 1.6e-43 180.3 124 71.0
Glyma.15G111400 Glycine max HOM05D007052 ORTHO05D008871 2.1e-43 179.9 125 71.2
BcaC04g21282 Brassica carinata HOM05D007052 ORTHO05D008871 2.7e-43 179.5 156 58.3
C09p33580 Brassica napus HOM05D007052 ORTHO05D008871 2.7e-43 179.5 156 58.3
BolC9t56192H Brassica oleracea HOM05D007052 ORTHO05D008871 2.7e-43 179.5 156 58.3
Glyma.09G007000 Glycine max HOM05D007052 ORTHO05D008871 2.7e-43 179.5 125 71.2
Lj6g0012328 Lotus japonicus HOM05D007052 ORTHO05D008871 3.5e-43 179.1 142 65.5
A09p26390 Brassica napus HOM05D007052 ORTHO05D008871 6.0e-43 178.3 156 57.7
BraA09t38213Z Brassica rapa HOM05D007052 ORTHO05D008871 6.0e-43 178.3 156 57.7
TAR627G0466 Trochodendron aralioides HOM05D007052 ORTHO05D008871 7.9e-43 177.9 156 62.2
Sc05g0009410 Simmondsia chinensis HOM05D007052 ORTHO05D008871 1.0e-42 177.6 146 61.0
EL10Ac8g20122 Beta vulgaris HOM05D007052 ORTHO05D008871 1.8e-42 176.8 125 68.8
Sed0006602 Sechium edule HOM05D007052 ORTHO05D008871 1.8e-42 176.8 122 69.7
VMungo0540G2459 Vigna mungo HOM05D007052 ORTHO05D008871 2.3e-42 176.4 125 70.4
Gohir.A10G011300 Gossypium hirsutum HOM05D007052 ORTHO05D008871 6.7e-42 174.9 121 71.1
Gorai.011G012000 Gossypium raimondii HOM05D007052 ORTHO05D008871 6.7e-42 174.9 121 71.1
AagrBONN_evm.TU.Sc2ySwM_117.3173 Anthoceros agrestis HOM05D007052 ORTHO05D008871 8.7e-42 174.5 123 68.3
CANSAT56G3240 Cannabis sativa HOM05D007052 ORTHO05D008871 8.7e-42 174.5 130 65.4
CARHR253150 Cardamine hirsuta HOM05D007052 ORTHO05D008871 8.7e-42 174.5 156 57.1
Ciclev10016958m.g Citrus clementina HOM05D007052 ORTHO05D008871 8.7e-42 174.5 124 68.5
Dinv20100 Davidia involucrata HOM05D007052 ORTHO05D008871 8.7e-42 174.5 124 70.2
Lj1A1235T90 Lonicera japonica HOM05D007052 ORTHO05D008871 1.1e-41 174.1 157 59.9
BcaB01g01799 Brassica carinata HOM05D007052 ORTHO05D008871 1.9e-41 173.3 137 63.5
arahy.Tifrunner.gnm1.ann1.LNF63F Arachis hypogaea HOM05D007052 ORTHO05D008871 2.5e-41 172.9 125 68.8
arahy.Tifrunner.gnm1.ann1.MS5PCD Arachis hypogaea HOM05D007052 ORTHO05D008871 2.5e-41 172.9 125 68.8
Sp6g04520 Schrenkiella parvula HOM05D007052 ORTHO05D008871 3.3e-41 172.6 167 55.1
PGR042G3505 Punica granatum HOM05D007052 ORTHO05D008871 4.3e-41 172.2 132 65.9
THA.LOC104812978 Tarenaya hassleriana HOM05D007052 ORTHO05D008871 4.3e-41 172.2 158 57.0
Duzib235G0934 Durio zibethinus HOM05D007052 ORTHO05D008871 5.6e-41 171.8 121 68.6
SMO118G0387 Selaginella moellendorffii HOM05D007052 ORTHO05D008871 5.6e-41 171.8 122 67.2
MELO3C007415.2 Cucumis melo HOM05D007052 ORTHO05D008871 9.6e-41 171.0 184 52.2
Thecc.06G227100 Theobroma cacao HOM05D007052 ORTHO05D008871 9.6e-41 171.0 121 69.4
Carub.0006s3216 Capsella rubella HOM05D007052 ORTHO05D008871 1.3e-40 170.6 156 56.4
ECA248G2484 Erigeron canadensis HOM05D007052 ORTHO05D008871 1.3e-40 170.6 123 69.1
Phvul.006G146300 Phaseolus vulgaris HOM05D007052 ORTHO05D008871 1.3e-40 170.6 122 69.7
Cc09_g01290 Coffea canephora HOM05D007052 ORTHO05D008871 2.1e-40 169.9 124 67.7
AT4G04330 Arabidopsis thaliana HOM05D007052 ORTHO05D008871 2.8e-40 169.5 125 64.8
Potri.011G010300 Populus trichocarpa HOM05D007052 ORTHO05D008871 3.7e-40 169.1 153 58.8
Aqoxy1G03011 Aquilegia oxysepala HOM05D007052 ORTHO05D008871 4.8e-40 168.7 124 66.9
Actinidia11870 Actinidia chinensis HOM05D007052 ORTHO05D008871 6.2e-40 168.3 123 68.3
Haze_06850 Corylus avellana HOM05D007052 ORTHO05D008871 6.2e-40 168.3 124 68.5
PSO675G2240 Papaver somniferum HOM05D007052 ORTHO05D008871 8.1e-40 167.9 135 63.0
Cfa000169 Carpinus fangiana HOM05D007052 ORTHO05D008871 1.1e-39 167.5 124 66.9
MD10G1325900 Malus domestica HOM05D007052 ORTHO05D008871 1.1e-39 167.5 125 68.8
Lsat_1_v5_gn_1_129560 Lactuca sativa HOM05D007052 ORTHO05D008871 1.4e-39 167.2 123 66.7
SGA_v2.0_scaffold7G03781 Striga asiatica HOM05D007052 ORTHO05D008871 1.4e-39 167.2 121 67.8
GSVIVG01012660001 Vitis vinifera HOM05D007052 ORTHO05D008871 1.4e-39 167.2 124 65.3
CDE07G0375 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 1.8e-39 166.8 121 67.8
CsaV3_6G048750 Cucumis sativus L. HOM05D007052 ORTHO05D008871 1.8e-39 166.8 136 63.2
Aa31LG9G9870 Aethionema arabicum HOM05D007052 ORTHO05D008871 2.4e-39 166.4 122 67.2
ATR0624G054 Amborella trichopoda HOM05D007052 ORTHO05D008871 2.4e-39 166.4 124 64.5
MD05G1351600 Malus domestica HOM05D007052 ORTHO05D008871 2.4e-39 166.4 125 68.0
Gohir.D06G156800 Gossypium hirsutum HOM05D007052 ORTHO05D008871 4.0e-39 165.6 136 63.2
Sabra11G0007900 Salix brachista HOM05D007052 ORTHO05D008871 4.0e-39 165.6 153 59.5
Lalb_Chr18g0056571 Lupinus albus HOM05D007052 ORTHO05D008871 6.9e-39 164.9 127 66.9
AL6G47870 Arabidopsis lyrata HOM05D007052 ORTHO05D008871 9.0e-39 164.5 123 65.0
PSO541G4001 Papaver somniferum HOM05D007052 ORTHO05D008871 2.0e-38 163.3 136 62.5
Migut.M01374 Erythranthe guttata HOM05D007052 ORTHO05D008871 3.4e-38 162.5 124 66.1
Eucgr.E03993 Eucalyptus grandis HOM05D007052 ORTHO05D008871 3.4e-38 162.5 124 64.5
Manes.17G028000 Manihot esculenta HOM05D007052 ORTHO05D008871 4.5e-38 162.2 124 62.1
Rhsim02G0105300 Rhododendron simsii HOM05D007052 ORTHO05D008871 4.5e-38 162.2 138 62.3
Gohir.A06G150600 Gossypium hirsutum HOM05D007052 ORTHO05D008871 7.6e-38 161.4 136 61.0
vmacro15801 Vaccinium macrocarpon HOM05D007052 ORTHO05D008871 1.0e-37 161.0 136 62.5
HanXRQChr01g0006501 Helianthus annuus HOM05D007052 ORTHO05D008871 3.8e-37 159.1 124 63.7
Os08g0425200 Oryza sativa ssp. japonica HOM05D007052 ORTHO05D008871 6.5e-37 158.3 128 60.2
ClCG01G021710 Citrullus lanatus HOM05D007052 ORTHO05D008871 1.4e-36 157.1 144 58.3
DCAR_024989 Daucus carota HOM05D007052 ORTHO05D008871 9.3e-36 154.5 121 65.3
CSS0050367 Camellia sinensis var. sinensis HOM05D007052 ORTHO05D008871 1.6e-35 153.7 115 66.1
Sopen02g025730 Solanum pennellii HOM05D007052 ORTHO05D008871 1.3e-34 150.6 146 55.5
COL.COLO4_31826 Corchorus olitorius HOM05D007052 ORTHO05D008871 2.3e-34 149.8 123 61.0
Solyc02g081060.4 Solanum lycopersicum HOM05D007052 ORTHO05D008871 3.9e-34 149.1 120 61.7
Hund23440 Selenicereus undatus HOM05D007052 ORTHO05D008871 6.7e-34 148.3 121 61.2
AUR62012751 Chenopodium quinoa HOM05D007052 ORTHO05D008871 8.7e-34 147.9 159 53.5
CAN.G1014.43 Capsicum annuum HOM05D007052 ORTHO05D008871 3.3e-33 146.0 140 56.4
Peaxi162Scf00178g00039 Petunia axillaris HOM05D007052 ORTHO05D008871 1.3e-32 144.1 127 59.1
QL05p072067 Quercus lobata HOM05D007052 ORTHO05D008871 4.8e-32 142.1 183 44.8
Ah.09g234570 Amaranthus hybridus HOM05D007052 ORTHO05D008871 6.2e-32 141.7 126 63.5
Hund21433 Selenicereus undatus HOM05D007052 ORTHO05D008871 4.1e-31 139.0 154 52.6
PGSC0003DMG400016462 Solanum tuberosum HOM05D007052 ORTHO05D008871 2.0e-30 136.7 130 57.7
Psat1g177840 Pisum sativum HOM05D007052 ORTHO05D008871 3.9e-26 122.5 77 77.9
SalBow8G1921 Salvia bowleyana HOM05D007052 ORTHO05D008871 1.9e-25 120.2 83 69.9
Atru.chr10.2273 Acer truncatum HOM05D007052 ORTHO05D008871 4.3e-25 119.0 76 78.9
RcHm_v2.0_Chr5g0002341 Rosa chinensis HOM05D007052 ORTHO05D008871 2.8e-24 116.3 87 65.5
Thhalv10029002m.g Eutrema salsugineum HOM05D007052 ORTHO05D008871 1.4e-23 114.0 108 58.3
CiPaw.09G097200 Carya illinoinensis HOM05D007052 ORTHO05D008871 4.1e-23 112.5 76 72.4
Nn1g07250 Nelumbo nucifera HOM05D007052 ORTHO05D008871 5.3e-23 112.1 88 61.4
AUR62021907 Chenopodium quinoa HOM05D007052 ORTHO05D008871 6.9e-23 111.7 125 49.6
Prupe.4G016000 Prunus persica HOM05D007052 ORTHO05D008871 2.0e-22 110.2 80 67.5
arahy.Tifrunner.gnm1.ann1.ZUMJ7A Arachis hypogaea HOM05D007052 ORTHO05D008871 1.6e-19 100.5 104 51.9
Cre07.g339000 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 4.6e-19 99.0 128 43.0
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 5.7e-17 92.0 77 62.3
Zm00001eb179210 Zea mays HOM05D007052 ORTHO05D008871 5.7e-17 92.0 77 59.7
Cre01.g030350 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 5.3e-15 85.5 123 43.1
RcHm_v2.0_Chr7g0236991 Rosa chinensis HOM05D007052 ORTHO05D008871 5.3e-15 85.5 121 41.3
Gorai.010G183200 Gossypium raimondii HOM05D007052 ORTHO05D008871 5.9e-14 82.0 136 39.0
PRCOL_00003846 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 5.9e-14 82.0 135 39.3
PRCOL_00003373 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 9.4e-12 74.7 127 37.8
MCO13G382 Micromonas commoda HOM05D007052 ORTHO05D008871 2.1e-11 73.6 151 34.4
MSTRG.7177 Avicennia marina HOM05D007052 ORTHO05D008871 8.8e-10 68.2 48 68.8
MCO09G711 Micromonas commoda HOM05D007052 ORTHO05D008871 9.7e-09 64.7 136 30.1
PRCOL_00004464 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 9.7e-09 64.7 120 33.3
FAN21G0414 Fragaria x ananassa HOM05D007052 ORTHO05D008871 1.3e-08 64.3 37 81.1
RcHm_v2.0_Chr5g0002331 Rosa chinensis HOM05D007052 ORTHO05D008871 8.2e-08 61.6 48 58.3


User provided reference genes

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