Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c25_460 Physcomitrium patens HOM05D005009 ORTHO05D006203 1.3e-90 336.3 162 100.0
Pp3c16_8300 Physcomitrium patens HOM05D005009 ORTHO05D006203 8.1e-72 273.9 190 72.6
Mapoly0109s0062 Marchantia polymorpha HOM05D005009 ORTHO05D006203 4.8e-64 248.1 188 66.0
Zm00001eb317990 Zea mays HOM05D005009 ORTHO05D006203 2.4e-63 245.7 190 64.2
AUR62031741 Chenopodium quinoa HOM05D005009 ORTHO05D006203 3.1e-63 245.4 190 63.7
QL04p021447 Quercus lobata HOM05D005009 ORTHO05D006203 3.1e-63 245.4 188 63.3
QL07p029267 Quercus lobata HOM05D005009 ORTHO05D006203 3.1e-63 245.4 188 63.3
ClCG05G027020 Citrullus lanatus HOM05D005009 ORTHO05D006203 4.0e-63 245.0 188 64.9
Aqoxy2G00437 Aquilegia oxysepala HOM05D005009 ORTHO05D006203 5.3e-63 244.6 188 64.4
Haze_02993 Corylus avellana HOM05D005009 ORTHO05D006203 5.3e-63 244.6 190 63.2
Nitab4.5_0002838g0060 Nicotiana tabacum HOM05D005009 ORTHO05D006203 5.3e-63 244.6 188 64.4
Potri.003G193900 Populus trichocarpa HOM05D005009 ORTHO05D006203 5.3e-63 244.6 188 63.8
Eucgr.E03953 Eucalyptus grandis HOM05D005009 ORTHO05D006203 6.9e-63 244.2 190 63.2
Solyc01g096610.4 Solanum lycopersicum HOM05D005009 ORTHO05D006203 6.9e-63 244.2 190 63.2
Sopen01g040340 Solanum pennellii HOM05D005009 ORTHO05D006203 6.9e-63 244.2 190 63.2
PGSC0003DMG401003286 Solanum tuberosum HOM05D005009 ORTHO05D006203 6.9e-63 244.2 190 63.2
CiPaw.14G009400 Carya illinoinensis HOM05D005009 ORTHO05D006203 9.0e-63 243.8 188 63.3
COL.COLO4_32171 Corchorus olitorius HOM05D000011 ORTHO05D006203 1.2e-62 243.4 188 63.3
AUR62032626 Chenopodium quinoa HOM05D005009 ORTHO05D006203 2.0e-62 242.7 190 62.6
Cc03_g14060 Coffea canephora HOM05D005009 ORTHO05D006203 2.0e-62 242.7 188 63.3
CsaV3_5G036940 Cucumis sativus L. HOM05D005009 ORTHO05D006203 2.6e-62 242.3 188 63.8
Eucgr.G03210 Eucalyptus grandis HOM05D005009 ORTHO05D006203 2.6e-62 242.3 190 62.6
Prupe.2G043300 Prunus persica HOM05D005009 ORTHO05D006203 2.6e-62 242.3 188 63.3
Ca_24007_v3 Cicer arietinum L. HOM05D005009 ORTHO05D006203 3.4e-62 241.9 189 63.0
Thecc.03G114300 Theobroma cacao HOM05D005009 ORTHO05D006203 3.4e-62 241.9 188 63.3
EL10Ac2g02762 Beta vulgaris HOM05D005009 ORTHO05D006203 4.5e-62 241.5 188 63.3
MCO01G737 Micromonas commoda HOM05D005009 ORTHO05D006203 4.5e-62 241.5 190 63.2
Nn7g36825 Nelumbo nucifera HOM05D005009 ORTHO05D006203 4.5e-62 241.5 188 63.3
PSO384G0249 Papaver somniferum HOM05D005009 ORTHO05D006203 4.5e-62 241.5 190 64.2
Phvul.011G192750 Phaseolus vulgaris HOM05D005009 ORTHO05D006203 4.5e-62 241.5 190 62.1
Glyma.09G090300 Glycine max HOM05D005009 ORTHO05D006203 5.8e-62 241.1 190 62.1
Gohir.A03G073900 Gossypium hirsutum HOM05D005009 ORTHO05D006203 5.8e-62 241.1 188 62.2
Gohir.D03G100300 Gossypium hirsutum HOM05D005009 ORTHO05D006203 5.8e-62 241.1 188 62.2
Gorai.003G105400 Gossypium raimondii HOM05D005009 ORTHO05D006203 5.8e-62 241.1 188 62.2
HanXRQChr11g0341231 Helianthus annuus HOM05D005009 ORTHO05D006203 5.8e-62 241.1 188 63.3
SGA_v2.0_scaffold408G51079 Striga asiatica HOM05D005009 ORTHO05D006203 5.8e-62 241.1 188 63.8
DCAR_006603 Daucus carota HOM05D005009 ORTHO05D006203 7.6e-62 240.7 188 62.8
Dinv11234 Davidia involucrata HOM05D005009 ORTHO05D006203 7.6e-62 240.7 188 62.8
AagrBONN_evm.TU.Sc2ySwM_340.215 Anthoceros agrestis HOM05D005009 ORTHO05D006203 1.0e-61 240.4 188 64.4
Manes.11G007500 Manihot esculenta HOM05D005009 ORTHO05D006203 1.0e-61 240.4 188 62.2
PSO339G0131 Papaver somniferum HOM05D005009 ORTHO05D006203 1.0e-61 240.4 190 63.7
PRCOL_00001494 Prasinoderma coloniale HOM05D005009 ORTHO05D006203 1.0e-61 240.4 192 61.5
Atru.chr12.1310 Acer truncatum HOM05D005009 ORTHO05D006203 1.3e-61 240.0 188 62.8
MBI19_g37444_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 1.3e-61 240.0 197 61.4
PGR031G2406 Punica granatum HOM05D005009 ORTHO05D006203 1.3e-61 240.0 188 61.7
RcHm_v2.0_Chr1g0327201 Rosa chinensis HOM05D005009 ORTHO05D006203 1.3e-61 240.0 188 62.8
Sabra03G0144600 Salix brachista HOM05D005009 ORTHO05D006203 1.3e-61 240.0 200 60.0
SMO137G0355 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 1.3e-61 240.0 188 61.2
THA.LOC104826749 Tarenaya hassleriana HOM05D005009 ORTHO05D006203 1.3e-61 240.0 188 62.2
Duzib084G0080 Durio zibethinus HOM05D005009 ORTHO05D006203 1.7e-61 239.6 188 62.8
Lsat_1_v5_gn_1_117041 Lactuca sativa HOM05D005009 ORTHO05D006203 1.7e-61 239.6 188 62.8
Psat4g146480 Pisum sativum HOM05D005009 ORTHO05D006203 1.7e-61 239.6 190 61.6
MSTRG.20500 Avicennia marina HOM05D005009 ORTHO05D006203 2.2e-61 239.2 188 62.8
CSS0011052 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 2.2e-61 239.2 188 62.8
Ciclev10002585m.g Citrus clementina HOM05D005009 ORTHO05D006203 2.2e-61 239.2 188 63.3
FvH4_7g03830 Fragaria vesca HOM05D005009 ORTHO05D006203 2.2e-61 239.2 188 62.8
FAN03G3221 Fragaria x ananassa HOM05D005009 ORTHO05D006203 2.2e-61 239.2 188 62.8
FAN06G1190 Fragaria x ananassa HOM05D005009 ORTHO05D006203 2.2e-61 239.2 188 62.8
BolC1t05245H Brassica oleracea HOM05D005009 ORTHO05D006203 2.9e-61 238.8 190 60.5
Lj3g0027433 Lotus japonicus HOM05D005009 ORTHO05D006203 2.9e-61 238.8 190 60.5
TWI15G1146 Tripterygium wilfordii HOM05D005009 ORTHO05D006203 2.9e-61 238.8 188 61.2
GSVIVG01028667001 Vitis vinifera HOM05D005009 ORTHO05D006203 2.9e-61 238.8 189 62.4
ATR0307G112 Amborella trichopoda HOM05D005009 ORTHO05D006203 3.8e-61 238.4 188 63.3
ECA248G2538 Erigeron canadensis HOM05D005009 ORTHO05D006203 3.8e-61 238.4 188 62.2
Migut.B01192 Erythranthe guttata HOM05D005009 ORTHO05D006203 3.8e-61 238.4 190 61.1
FAN10G3328 Fragaria x ananassa HOM05D005009 ORTHO05D006203 3.8e-61 238.4 188 62.8
Lalb_Chr19g0132931 Lupinus albus HOM05D005009 ORTHO05D006203 3.8e-61 238.4 188 61.7
Medtr8g040630 Medicago truncatula HOM05D005009 ORTHO05D006203 3.8e-61 238.4 188 61.7
TPR.G8532 Trifolium pratense HOM05D005009 ORTHO05D006203 3.8e-61 238.4 190 61.1
GSVIVG01036607001 Vitis vinifera HOM05D005009 ORTHO05D006203 3.8e-61 238.4 188 63.3
C01p53010 Brassica napus HOM05D005009 ORTHO05D006203 4.9e-61 238.0 189 61.4
Dinv32009 Davidia involucrata HOM05D005009 ORTHO05D006203 4.9e-61 238.0 188 62.8
Sp3g10520 Schrenkiella parvula HOM05D005009 ORTHO05D006203 4.9e-61 238.0 188 61.7
Actinidia06220 Actinidia chinensis HOM05D005009 ORTHO05D006203 6.5e-61 237.7 188 61.7
Thhalv10021577m.g Eutrema salsugineum HOM05D005009 ORTHO05D006203 8.4e-61 237.3 188 61.2
SEGI_18977 Sequoiadendron giganteum HOM05D005009 ORTHO05D006203 1.1e-60 236.9 188 62.8
TAR633G2352 Trochodendron aralioides HOM05D005009 ORTHO05D006203 1.1e-60 236.9 188 62.8
Carub.0003s1167 Capsella rubella HOM05D005009 ORTHO05D006203 1.4e-60 236.5 188 61.2
CDE08G1579 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 1.4e-60 236.5 188 62.2
Cre07.g351650 Chlamydomonas reinhardtii HOM05D005009 ORTHO05D006203 1.4e-60 236.5 190 61.6
MELO3C034019.2 Cucumis melo HOM05D005009 ORTHO05D006203 1.4e-60 236.5 195 61.5
Duzib068G0995 Durio zibethinus HOM05D005009 ORTHO05D006203 1.4e-60 236.5 188 61.7
AL3G23960 Arabidopsis lyrata HOM05D005009 ORTHO05D006203 1.9e-60 236.1 188 60.6
AT3G12300 Arabidopsis thaliana HOM05D005009 ORTHO05D006203 1.9e-60 236.1 188 60.6
MBI19_g44926_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 1.9e-60 236.1 187 63.1
BcaB04g18685 Brassica carinata HOM05D005009 ORTHO05D006203 2.5e-60 235.7 188 60.6
BcaC09g48230 Brassica carinata HOM05D005009 ORTHO05D006203 2.5e-60 235.7 188 60.6
A06p13990 Brassica napus HOM05D005009 ORTHO05D006203 2.5e-60 235.7 189 60.8
A03p37590 Brassica napus HOM05D005009 ORTHO05D006203 3.2e-60 235.3 189 60.3
BolC3t16835H Brassica oleracea HOM05D005009 ORTHO05D006203 3.2e-60 235.3 189 60.3
C03p45580 Brassica napus HOM05D005009 ORTHO05D006203 5.5e-60 234.6 189 59.8
Sed0026819 Sechium edule HOM05D005009 ORTHO05D006203 1.2e-59 233.4 215 55.8
arahy.Tifrunner.gnm1.ann1.CDA2TW Arachis hypogaea HOM05D005009 ORTHO05D006203 1.6e-59 233.0 211 55.9
BcaC01g04053 Brassica carinata HOM05D005009 ORTHO05D006203 2.1e-59 232.6 188 59.6
Hund13390 Selenicereus undatus HOM05D005009 ORTHO05D006203 2.1e-59 232.6 188 61.2
Hma1.2p1_0837F.1_g226250 Hydrangea macrophylla HOM05D005009 ORTHO05D006203 2.7e-59 232.3 202 58.9
Rhsim07G0069300 Rhododendron simsii HOM05D005009 ORTHO05D006203 2.7e-59 232.3 215 55.8
unitig_22.g5330 Utricularia gibba HOM05D005009 ORTHO05D006203 3.5e-59 231.9 195 59.5
Ah.01g018000 Amaranthus hybridus HOM05D005009 ORTHO05D006203 2.3e-58 229.2 182 61.5
Pp3c7_7130 Physcomitrium patens HOM05D005009 ORTHO05D006203 2.3e-58 229.2 189 60.3
CANSAT01G2494 Cannabis sativa HOM05D005009 ORTHO05D006203 3.9e-58 228.4 188 59.6
SMO137G0211 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 3.9e-58 228.4 190 60.0
arahy.Tifrunner.gnm1.ann1.SBUN5C Arachis hypogaea HOM05D005009 ORTHO05D006203 4.8e-56 221.5 229 51.1
Peaxi162Scf00220g00315 Petunia axillaris HOM05D005009 ORTHO05D006203 2.9e-53 212.2 172 61.0
Os09g0510200 Oryza sativa ssp. japonica HOM05D005009 ORTHO05D006203 6.5e-53 211.1 170 61.2
vmacro21942 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 1.1e-52 210.3 182 57.7
vmacro23458 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 1.1e-52 210.3 182 57.7
Lj9A658G62 Lonicera japonica HOM05D005009 ORTHO05D006203 1.4e-52 209.9 153 65.4
Aa31LG3G6530 Aethionema arabicum HOM05D005009 ORTHO05D006203 2.7e-51 205.7 188 54.3
Cpa.g.sc82.9 Carica papaya HOM05D005009 ORTHO05D006203 4.5e-46 188.3 158 58.2
VMungo1127G1850 Vigna mungo HOM05D005009 ORTHO05D006203 1.0e-45 187.2 159 56.6
CSS0003702 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 1.7e-45 186.4 159 57.2
SHI34551 Sapria himalayana HOM05D005009 ORTHO05D006203 3.8e-45 185.3 158 58.9
ClCG05G014250 Citrullus lanatus HOM05D005009 ORTHO05D006203 1.2e-43 180.3 135 63.7
Haze_26638 Corylus avellana HOM05D005009 ORTHO05D006203 2.7e-43 179.1 188 49.5
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 2.8e-40 169.1 208 44.2
Glyma.13G184700 Glycine max HOM05D005009 ORTHO05D006203 6.3e-40 167.9 159 51.6
SMO232G0039 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 1.1e-39 167.2 182 48.4
HPP92_011758 Vanilla planifolia HOM05D005009 ORTHO05D006203 2.0e-38 162.9 126 65.1
SMO352G0037 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 7.4e-33 144.4 207 39.6
Actinidia07967 Actinidia chinensis HOM05D005009 ORTHO05D006203 9.7e-33 144.1 158 51.3
MD02G1276900 Malus domestica HOM05D005009 ORTHO05D006203 9.7e-33 144.1 81 77.8
BraA03t12913Z Brassica rapa HOM05D005009 ORTHO05D006203 1.3e-32 143.7 80 78.8
Cfa001149 Carpinus fangiana HOM05D005009 ORTHO05D006203 2.2e-32 142.9 79 79.7
HPP92_011747 Vanilla planifolia HOM05D005009 ORTHO05D006203 2.2e-32 142.9 79 79.7
Glyma.13G192001 Glycine max HOM05D005009 ORTHO05D006203 4.8e-32 141.7 81 77.8
CDE08G0779 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 1.4e-31 140.2 79 77.2
Sed0013386 Sechium edule HOM05D005009 ORTHO05D006203 5.3e-31 138.3 140 51.4
Oeu064146.2 Olea europaea HOM05D005009 ORTHO05D006203 5.0e-29 131.7 79 74.7
Glyma.13G190100 Glycine max HOM05D005009 ORTHO05D006203 1.0e-26 124.0 73 75.3
CARHR086850 Cardamine hirsuta HOM05D005009 ORTHO05D006203 3.0e-26 122.5 70 75.7
Nitab4.5_0004168g0130 Nicotiana tabacum HOM05D005009 ORTHO05D006203 5.2e-26 121.7 96 61.5
HPP92_011756 Vanilla planifolia HOM05D005009 ORTHO05D006203 8.8e-26 120.9 96 62.5
MD02G1276800 Malus domestica HOM05D005009 ORTHO05D006203 4.4e-25 118.6 96 60.4
Glyma.13G188400 Glycine max HOM05D005009 ORTHO05D006203 9.7e-25 117.5 96 58.3
MD07G1044300 Malus domestica HOM05D005009 ORTHO05D006203 4.8e-24 115.2 68 75.0
BcaC09g48229 Brassica carinata HOM05D005009 ORTHO05D006203 3.1e-23 112.5 69 72.5
C01p53030 Brassica napus HOM05D005009 ORTHO05D006203 3.1e-23 112.5 69 72.5
BolC1t05246H Brassica oleracea HOM05D005009 ORTHO05D006203 4.1e-23 112.1 69 72.5
Prupe.3G123900 Prunus persica HOM05D005009 ORTHO05D006203 8.5e-21 104.4 86 62.8
Pp3c6_12450 Physcomitrium patens HOM05D005009 ORTHO05D006203 5.7e-17 91.7 66 60.6
Manes.04G156350 Manihot esculenta HOM05D005009 ORTHO05D006203 4.5e-14 82.0 50 72.0
arahy.Tifrunner.gnm1.ann1.WDN55T Arachis hypogaea HOM05D000001 ORTHO05D009381 5.0e-13 78.6 66 56.1
A01p39420 Brassica napus HOM05D005009 ORTHO05D006203 2.7e-11 72.8 39 76.9
A03p22660 Brassica napus HOM05D005009 ORTHO05D033042 1.0e-10 70.9 37 81.1
A10p02030 Brassica napus HOM05D005009 ORTHO05D006203 1.0e-10 70.9 37 81.1
C03p63540 Brassica napus HOM05D005009 ORTHO05D033042 1.0e-10 70.9 37 81.1
BraA02t08111Z Brassica rapa HOM05D005009 ORTHO05D033042 1.0e-10 70.9 37 81.1
Glyma.13G188051 Glycine max HOM05D005009 ORTHO05D006203 2.3e-10 69.7 51 58.8
Sc11g0006340 Simmondsia chinensis HOM05D005009 ORTHO05D006203 3.4e-09 65.9 66 45.5


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