Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 5.3e-142 507.7 259 100.0
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 2.5e-99 365.9 262 77.1
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 9.3e-62 241.1 186 61.3
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 3.5e-61 239.2 182 65.9
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 7.7e-56 221.5 152 67.1
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 4.8e-50 202.2 185 53.5
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 6.5e-47 191.8 156 59.0
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 3.2e-46 189.5 157 54.8
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 1.8e-44 183.7 156 56.4
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 2.3e-44 183.3 157 56.7
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 2.3e-44 183.3 157 56.7
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 6.7e-44 181.8 170 52.9
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.1e-43 181.0 158 54.4
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.1e-43 181.0 158 54.4
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 1.1e-43 181.0 177 53.7
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 3.3e-43 179.5 152 55.9
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 3.3e-43 179.5 151 56.3
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 4.4e-43 179.1 159 54.1
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 4.4e-43 179.1 158 53.8
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 7.4e-43 178.3 146 59.6
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 7.4e-43 178.3 160 54.4
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 9.7e-43 177.9 152 57.9
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 1.7e-42 177.2 164 53.7
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 2.2e-42 176.8 157 54.1
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 2.8e-42 176.4 157 56.1
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 2.8e-42 176.4 155 54.8
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 3.7e-42 176.0 151 55.6
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 3.7e-42 176.0 152 57.9
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 4.8e-42 175.6 156 54.5
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 4.8e-42 175.6 161 55.3
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 4.8e-42 175.6 154 54.5
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 8.2e-42 174.9 151 55.6
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 1.1e-41 174.5 158 53.8
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 1.1e-41 174.5 154 54.5
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 1.1e-41 174.5 148 56.8
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 1.1e-41 174.5 156 53.8
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 1.4e-41 174.1 152 57.2
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 1.4e-41 174.1 158 53.8
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 1.4e-41 174.1 152 57.9
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 1.4e-41 174.1 152 57.9
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 1.8e-41 173.7 157 55.4
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 1.8e-41 173.7 154 54.5
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 1.8e-41 173.7 158 55.1
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 2.4e-41 173.3 156 53.8
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 2.4e-41 173.3 155 52.9
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 3.1e-41 172.9 151 56.3
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 3.1e-41 172.9 153 53.6
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 3.1e-41 172.9 156 53.8
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 3.1e-41 172.9 146 58.9
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 4.1e-41 172.6 176 48.9
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 5.3e-41 172.2 152 52.6
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 5.3e-41 172.2 152 56.6
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 5.3e-41 172.2 147 56.5
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 5.3e-41 172.2 158 53.2
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 5.3e-41 172.2 155 54.8
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 7.0e-41 171.8 179 50.3
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 7.0e-41 171.8 160 53.8
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 7.0e-41 171.8 159 52.2
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 9.1e-41 171.4 147 57.1
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 9.1e-41 171.4 157 54.1
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 1.2e-40 171.0 167 52.7
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 1.5e-40 170.6 151 55.0
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 1.5e-40 170.6 146 56.2
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 1.5e-40 170.6 163 52.1
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 2.0e-40 170.2 179 50.3
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 2.0e-40 170.2 153 55.6
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 2.6e-40 169.9 160 55.0
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 2.6e-40 169.9 155 54.8
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 3.5e-40 169.5 160 53.1
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 3.5e-40 169.5 161 51.6
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 4.5e-40 169.1 146 56.8
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 4.5e-40 169.1 160 53.1
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 4.5e-40 169.1 151 54.3
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 7.7e-40 168.3 151 54.3
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 1.0e-39 167.9 153 52.9
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 1.0e-39 167.9 148 56.8
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 1.3e-39 167.5 153 55.6
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 1.7e-39 167.2 152 54.6
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 1.7e-39 167.2 158 54.4
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 1.7e-39 167.2 180 50.0
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 2.9e-39 166.4 161 50.9
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 2.9e-39 166.4 154 51.9
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 2.9e-39 166.4 154 51.9
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 2.9e-39 166.4 154 51.9
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 6.5e-39 165.2 130 60.0
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 6.5e-39 165.2 179 50.3
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 8.5e-39 164.9 172 49.4
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 8.5e-39 164.9 161 48.4
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 1.4e-38 164.1 153 52.9
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 1.4e-38 164.1 233 43.3
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 3.2e-38 162.9 157 52.2
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 3.2e-38 162.9 152 52.0
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 4.2e-38 162.5 174 47.7
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 4.2e-38 162.5 157 51.6
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 5.5e-38 162.2 157 51.0
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 5.5e-38 162.2 151 52.3
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 7.2e-38 161.8 157 51.6
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 7.2e-38 161.8 222 40.1
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 7.2e-38 161.8 159 50.3
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 9.4e-38 161.4 156 51.9
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 4.7e-37 159.1 157 51.0
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 1.0e-36 157.9 162 50.6
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 1.4e-36 157.5 146 52.7
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 1.8e-36 157.1 154 51.3
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 1.8e-36 157.1 154 51.3
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 1.8e-36 157.1 154 51.3
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 2.3e-36 156.8 177 47.5
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 3.0e-36 156.4 154 50.6
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 3.9e-36 156.0 157 50.3
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 3.9e-36 156.0 160 51.2
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 3.9e-36 156.0 153 51.6
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 5.2e-36 155.6 172 48.3
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 6.7e-36 155.2 151 51.7
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 6.7e-36 155.2 150 52.7
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 8.8e-36 154.8 198 44.9
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 2.2e-34 150.2 153 50.3
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 7.0e-33 145.2 146 51.4
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 5.2e-28 129.0 155 43.9
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 6.3e-26 122.1 102 53.9
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 1.7e-23 114.0 151 43.0
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 3.3e-14 83.2 73 49.3
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 5.2e-12 75.9 51 62.7


User provided reference genes

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