Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 2.3e-131 472.2 236 100.0
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 3.5e-47 192.6 238 49.6
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 3.0e-43 179.5 228 44.7
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 8.0e-36 154.8 251 41.0
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 8.0e-36 154.8 185 45.4
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 2.1e-28 130.2 185 40.5
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 1.5e-26 124.0 179 38.5
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 3.4e-26 122.9 185 37.8
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 7.5e-26 121.7 202 39.6
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 4.9e-25 119.0 178 38.8
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 2.4e-24 116.7 182 40.7
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 7.0e-24 115.2 181 39.2
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 9.2e-24 114.8 192 33.9
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 1.6e-23 114.0 213 33.8
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 2.7e-23 113.2 197 33.0
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 4.6e-23 112.5 180 35.6
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 4.6e-23 112.5 182 36.3
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 7.8e-23 111.7 179 38.0
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 1.0e-22 111.3 179 35.8
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.0e-22 111.3 177 38.4
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.0e-22 111.3 177 39.0
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 1.3e-22 110.9 177 35.6
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 1.7e-22 110.5 211 35.1
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 1.7e-22 110.5 176 33.0
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 2.3e-22 110.2 183 34.4
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 2.3e-22 110.2 178 36.0
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 3.0e-22 109.8 180 33.9
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 3.0e-22 109.8 194 35.6
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 3.9e-22 109.4 182 35.2
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 3.9e-22 109.4 223 32.7
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 3.9e-22 109.4 199 32.7
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 3.9e-22 109.4 193 33.7
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 5.0e-22 109.0 190 34.2
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 8.6e-22 108.2 180 33.3
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 8.6e-22 108.2 197 35.0
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 1.1e-21 107.8 185 36.2
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.1e-21 107.8 211 33.6
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 1.1e-21 107.8 220 34.5
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 1.1e-21 107.8 212 33.0
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 1.5e-21 107.5 191 35.6
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 1.5e-21 107.5 214 34.1
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 1.5e-21 107.5 176 34.1
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 1.5e-21 107.5 212 34.9
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 1.9e-21 107.1 202 33.7
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 1.9e-21 107.1 179 35.8
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 1.9e-21 107.1 197 35.0
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 2.5e-21 106.7 195 35.4
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 3.3e-21 106.3 193 33.7
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 3.3e-21 106.3 190 34.2
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 4.3e-21 105.9 184 35.9
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 4.3e-21 105.9 186 34.4
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 5.6e-21 105.5 214 33.2
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 5.6e-21 105.5 208 34.1
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 7.3e-21 105.1 216 32.9
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 7.3e-21 105.1 200 32.5
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 9.5e-21 104.8 183 32.2
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 9.5e-21 104.8 184 35.9
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 9.5e-21 104.8 202 33.7
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 1.2e-20 104.4 184 35.9
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 1.2e-20 104.4 201 32.8
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 1.2e-20 104.4 188 34.0
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 1.2e-20 104.4 185 35.1
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 1.6e-20 104.0 193 35.8
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 2.1e-20 103.6 181 34.8
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 2.1e-20 103.6 182 31.3
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 2.1e-20 103.6 197 32.0
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 2.1e-20 103.6 210 30.5
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 2.1e-20 103.6 219 32.4
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 2.8e-20 103.2 193 35.2
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 2.8e-20 103.2 185 33.5
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 2.8e-20 103.2 184 32.6
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 3.6e-20 102.8 183 35.0
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 3.6e-20 102.8 183 35.0
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 3.6e-20 102.8 183 35.0
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 3.6e-20 102.8 203 31.0
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 4.7e-20 102.4 180 35.0
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 4.7e-20 102.4 185 35.1
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 1.1e-19 101.3 204 31.9
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 1.4e-19 100.9 186 35.5
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 1.4e-19 100.9 182 30.8
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 1.8e-19 100.5 177 33.9
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 3.1e-19 99.8 188 34.6
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 4.0e-19 99.4 187 34.2
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 4.0e-19 99.4 177 32.2
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 5.2e-19 99.0 200 31.0
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 5.2e-19 99.0 216 31.9
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 8.9e-19 98.2 186 31.2
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 8.9e-19 98.2 186 33.9
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 8.9e-19 98.2 174 32.2
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 1.2e-18 97.8 173 32.9
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 1.5e-18 97.4 168 32.1
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 2.0e-18 97.1 184 33.7
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 2.0e-18 97.1 174 31.6
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 2.6e-18 96.7 168 31.5
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 3.4e-18 96.3 179 34.1
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 4.4e-18 95.9 183 31.7
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 7.5e-18 95.1 170 34.7
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 1.3e-17 94.4 190 31.6
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 1.3e-17 94.4 174 30.5
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 1.7e-17 94.0 179 33.0
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 6.4e-17 92.0 199 30.2
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 1.9e-16 90.5 202 31.2
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 1.9e-16 90.5 186 31.7
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 4.1e-16 89.4 187 32.6
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 1.2e-15 87.8 199 31.7
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 2.1e-15 87.0 211 28.9
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 2.1e-15 87.0 239 29.7
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 6.0e-15 85.5 181 32.6
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 6.0e-15 85.5 213 30.0
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 1.0e-14 84.7 200 30.0
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 7.3e-13 78.6 181 28.2
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 3.6e-12 76.3 136 32.4
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 1.1e-11 74.7 184 30.4
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 2.2e-09 67.0 218 27.1
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 1.2e-07 61.2 90 36.7


User provided reference genes

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