Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 1.1e-74 283.1 139 100.0
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 9.2e-48 193.7 138 71.7
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 3.6e-20 102.1 134 42.5
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 1.5e-18 96.7 106 45.3
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 2.9e-17 92.4 101 42.6
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 1.2e-15 87.0 130 36.2
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 4.6e-15 85.1 130 36.2
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 2.3e-14 82.8 130 35.4
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 2.3e-14 82.8 92 38.0
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 2.3e-14 82.8 133 35.3
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.3e-14 82.8 95 37.9
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 2.3e-14 82.8 95 38.9
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 3.0e-14 82.4 130 33.8
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 3.9e-14 82.0 106 36.8
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 5.1e-14 81.6 129 32.6
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 5.1e-14 81.6 129 34.1
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 5.1e-14 81.6 100 37.0
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 6.6e-14 81.3 130 35.4
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 8.7e-14 80.9 94 40.4
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 8.7e-14 80.9 95 36.8
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 1.1e-13 80.5 111 35.1
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.5e-13 80.1 95 36.8
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.5e-13 80.1 95 36.8
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 1.5e-13 80.1 108 35.2
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 1.9e-13 79.7 130 33.1
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 1.9e-13 79.7 103 35.0
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.9e-13 79.7 134 33.6
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 2.5e-13 79.3 95 36.8
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 3.3e-13 79.0 95 37.9
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 3.3e-13 79.0 95 35.8
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 4.3e-13 78.6 95 36.8
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 4.3e-13 78.6 103 35.0
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 4.3e-13 78.6 95 36.8
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 4.3e-13 78.6 101 33.7
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 5.6e-13 78.2 130 33.8
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 5.6e-13 78.2 130 33.8
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 7.3e-13 77.8 96 35.4
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 7.3e-13 77.8 95 35.8
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 7.3e-13 77.8 95 36.8
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 9.6e-13 77.4 131 33.6
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 9.6e-13 77.4 95 35.8
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 1.3e-12 77.0 132 34.8
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.3e-12 77.0 95 35.8
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 1.6e-12 76.6 126 28.6
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 2.1e-12 76.3 105 35.2
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 2.8e-12 75.9 101 31.7
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 3.6e-12 75.5 126 32.5
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 3.6e-12 75.5 92 34.8
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 3.6e-12 75.5 102 35.3
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 3.6e-12 75.5 130 31.5
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 3.6e-12 75.5 95 35.8
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 3.6e-12 75.5 99 36.4
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 4.8e-12 75.1 95 33.7
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 4.8e-12 75.1 99 34.3
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 4.8e-12 75.1 96 36.5
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 4.8e-12 75.1 125 34.4
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 6.2e-12 74.7 95 34.7
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 6.2e-12 74.7 95 34.7
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 6.2e-12 74.7 124 29.8
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 8.1e-12 74.3 95 33.7
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 8.1e-12 74.3 95 32.6
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 8.1e-12 74.3 95 33.7
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 8.1e-12 74.3 95 32.6
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 8.1e-12 74.3 106 33.0
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 1.1e-11 73.9 92 33.7
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 1.1e-11 73.9 95 33.7
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 1.1e-11 73.9 95 35.8
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 1.4e-11 73.6 95 32.6
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.4e-11 73.6 95 32.6
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.4e-11 73.6 107 36.4
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 1.8e-11 73.2 108 32.4
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 1.8e-11 73.2 95 32.6
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 2.4e-11 72.8 102 32.4
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 2.4e-11 72.8 94 36.2
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 2.4e-11 72.8 107 32.7
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 3.1e-11 72.4 107 34.6
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 3.1e-11 72.4 102 37.3
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 4.0e-11 72.0 98 34.7
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 4.0e-11 72.0 118 35.6
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 5.3e-11 71.6 130 31.5
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 5.3e-11 71.6 105 33.3
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 5.3e-11 71.6 105 33.3
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 5.3e-11 71.6 105 33.3
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 5.3e-11 71.6 105 33.3
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 5.3e-11 71.6 106 32.1
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 6.9e-11 71.2 117 31.6
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 9.0e-11 70.9 94 35.1
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 9.0e-11 70.9 117 30.8
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 9.0e-11 70.9 117 30.8
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 1.2e-10 70.5 95 32.6
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 2.6e-10 69.3 101 33.7
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 5.8e-10 68.2 107 29.0
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 7.6e-10 67.8 92 32.6
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 7.6e-10 67.8 135 30.4
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 7.6e-10 67.8 110 33.6
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 2.9e-09 65.9 130 29.2
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 4.9e-09 65.1 143 27.3
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 6.4e-09 64.7 129 27.9
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 1.4e-08 63.5 101 29.7
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 3.5e-07 58.9 112 25.0


User provided reference genes

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