Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 4.4e-56 221.1 114 100.0
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 3.6e-42 174.9 114 80.7
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 1.1e-27 126.7 114 61.4
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 4.3e-27 124.8 114 60.5
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 1.8e-25 119.4 97 66.0
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 3.1e-25 118.6 90 66.7
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 4.0e-25 118.2 102 59.8
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 6.9e-25 117.5 101 62.4
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 8.9e-25 117.1 69 78.3
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 2.6e-24 115.5 89 65.2
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 2.6e-24 115.5 83 67.5
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 4.4e-24 114.8 98 61.2
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 5.8e-24 114.4 84 67.9
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 5.8e-24 114.4 89 68.5
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 5.8e-24 114.4 62 82.3
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 5.8e-24 114.4 62 82.3
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 7.6e-24 114.0 81 67.9
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 7.6e-24 114.0 113 58.4
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 7.6e-24 114.0 87 65.5
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 7.6e-24 114.0 90 65.6
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 9.9e-24 113.6 76 71.1
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 9.9e-24 113.6 110 57.3
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 9.9e-24 113.6 91 64.8
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 9.9e-24 113.6 87 63.2
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 1.3e-23 113.2 93 63.4
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 1.3e-23 113.2 93 63.4
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 1.3e-23 113.2 92 65.2
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 1.3e-23 113.2 89 62.9
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 1.7e-23 112.8 85 68.2
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 1.7e-23 112.8 78 67.9
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 2.2e-23 112.5 90 63.3
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 2.2e-23 112.5 76 69.7
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 2.2e-23 112.5 80 68.8
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 2.2e-23 112.5 94 61.7
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 2.2e-23 112.5 113 51.3
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 2.9e-23 112.1 97 59.8
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 2.9e-23 112.1 62 80.6
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 2.9e-23 112.1 101 58.4
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 3.8e-23 111.7 80 68.8
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 3.8e-23 111.7 98 59.2
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 3.8e-23 111.7 86 65.1
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 3.8e-23 111.7 78 67.9
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 3.8e-23 111.7 83 66.3
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 3.8e-23 111.7 114 55.3
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 3.8e-23 111.7 94 61.7
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 3.8e-23 111.7 97 60.8
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 3.8e-23 111.7 104 55.8
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 4.9e-23 111.3 118 54.2
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 4.9e-23 111.3 104 55.8
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 4.9e-23 111.3 83 66.3
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 4.9e-23 111.3 85 60.0
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 6.4e-23 110.9 88 63.6
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.4e-23 110.9 67 74.6
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.4e-23 110.9 67 74.6
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 6.4e-23 110.9 76 68.4
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 6.4e-23 110.9 89 61.8
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 6.4e-23 110.9 86 64.0
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 8.4e-23 110.5 100 61.0
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 8.4e-23 110.5 108 55.6
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 8.4e-23 110.5 111 54.1
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 1.1e-22 110.2 67 74.6
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 1.9e-22 109.4 92 58.7
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 1.9e-22 109.4 92 58.7
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 1.9e-22 109.4 62 77.4
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 1.9e-22 109.4 83 63.9
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 2.4e-22 109.0 96 57.3
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 2.4e-22 109.0 117 51.3
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 2.4e-22 109.0 86 65.1
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 3.2e-22 108.6 113 52.2
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 3.2e-22 108.6 107 54.2
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 3.2e-22 108.6 96 61.5
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 3.2e-22 108.6 113 55.8
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 3.2e-22 108.6 93 59.1
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 4.2e-22 108.2 90 60.0
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 4.2e-22 108.2 116 54.3
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 4.2e-22 108.2 114 52.6
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 7.1e-22 107.5 107 57.9
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 7.1e-22 107.5 101 55.4
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 7.1e-22 107.5 77 64.9
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 1.2e-21 106.7 91 58.2
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 1.2e-21 106.7 91 59.3
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 1.6e-21 106.3 86 60.5
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 1.6e-21 106.3 91 58.2
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 1.6e-21 106.3 91 58.2
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 1.6e-21 106.3 91 58.2
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 1.6e-21 106.3 91 57.1
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 2.1e-21 105.9 97 60.8
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 2.1e-21 105.9 113 52.2
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 3.5e-21 105.1 114 52.6
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 3.5e-21 105.1 113 54.0
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 4.6e-21 104.8 62 74.2
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 4.6e-21 104.8 62 74.2
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 4.6e-21 104.8 88 62.5
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 7.8e-21 104.0 94 55.3
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 1.0e-20 103.6 85 60.0
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 1.0e-20 103.6 77 63.6
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 1.7e-20 102.8 115 53.0
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 2.3e-20 102.4 112 51.8
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 3.9e-20 101.7 83 55.4
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 4.8e-18 94.7 103 51.5
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 3.1e-17 92.0 92 54.3
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 2.9e-15 85.5 92 52.2
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 2.9e-15 85.5 62 64.5
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 2.4e-14 82.4 67 49.3
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 2.4e-06 55.8 26 84.6
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 4.2e-06 55.1 74 43.2
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 7.1e-06 54.3 43 62.8


User provided reference genes

Program Settings