Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_6860 Physcomitrium patens HOM05D003575 ORTHO05D003587 0.0e+00 1517.3 884 100.0
Mapoly0066s0003 Marchantia polymorpha HOM05D040683 ORTHO05D003587 3.0e-19 101.7 218 31.2
Mapoly0021s0099 Marchantia polymorpha HOM05D003575 ORTHO05D003587 3.9e-19 101.3 166 33.1
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 5.1e-19 100.9 185 33.5
Zm00001eb287050 Zea mays HOM05D003575 ORTHO05D003587 2.8e-17 95.1 160 31.9
Mapoly0033s0032 Marchantia polymorpha HOM05D003575 ORTHO05D003587 7.0e-16 90.5 268 29.9
Mapoly0072s0063 Marchantia polymorpha HOM05D040683 ORTHO05D003587 2.0e-15 89.0 201 27.9
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 5.9e-15 87.4 164 32.3
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 1.1e-13 83.2 179 32.4
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.9e-13 82.4 159 32.1
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 5.5e-13 80.9 155 32.3
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 5.5e-13 80.9 161 32.9
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 5.5e-13 80.9 163 31.9
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 9.4e-13 80.1 155 32.3
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 9.4e-13 80.1 155 32.3
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 9.4e-13 80.1 156 30.8
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 9.4e-13 80.1 164 32.9
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 1.6e-12 79.3 156 29.5
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 2.1e-12 79.0 161 31.1
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 2.7e-12 78.6 165 28.5
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 3.6e-12 78.2 142 31.0
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.6e-12 78.2 142 31.0
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 4.7e-12 77.8 160 30.0
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.1e-12 77.4 142 31.0
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 8.0e-12 77.0 141 34.0
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 8.0e-12 77.0 164 32.9
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 1.0e-11 76.6 156 30.8
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 1.4e-11 76.3 175 28.6
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 1.8e-11 75.9 163 28.8
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 1.8e-11 75.9 173 28.3
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 3.0e-11 75.1 136 33.8
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 3.0e-11 75.1 152 28.3
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 3.0e-11 75.1 211 26.5
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 3.9e-11 74.7 143 33.6
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 8.8e-11 73.6 238 26.1
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 1.5e-10 72.8 144 31.9
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 2.0e-10 72.4 150 29.3
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 2.0e-10 72.4 154 27.9
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.0e-10 72.4 154 27.9
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 2.0e-10 72.4 165 27.9
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 3.3e-10 71.6 127 31.5
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 3.3e-10 71.6 238 25.6
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 4.4e-10 71.2 161 29.8
SEGI_27516 Sequoiadendron giganteum HOM05D003575 ORTHO05D003587 4.4e-10 71.2 84 40.5
FAN14G1012 Fragaria x ananassa HOM05D003575 ORTHO05D003587 5.7e-10 70.9 161 29.8
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 5.7e-10 70.9 162 28.4
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 5.7e-10 70.9 165 27.3
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 5.7e-10 70.9 154 27.9
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 9.7e-10 70.1 169 29.0
FAN25G1379 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.7e-09 69.3 211 27.0
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 1.7e-09 69.3 170 27.1
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 2.2e-09 68.9 238 25.6
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 6.3e-09 67.4 162 25.3
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 8.2e-09 67.0 143 27.3
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 1.1e-08 66.6 154 30.5
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 1.1e-08 66.6 145 28.3
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 1.1e-08 66.6 196 27.0
Zm00001eb264990 Zea mays HOM05D003575 ORTHO05D003587 1.1e-08 66.6 138 29.0
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.4e-08 66.2 237 24.5
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 2.4e-08 65.5 125 33.6
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 2.4e-08 65.5 150 29.3
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 4.1e-08 64.7 185 25.9
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 5.3e-08 64.3 147 29.3
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 1.2e-07 63.2 159 27.7
RcHm_v2.0_Chr2g0155781 Rosa chinensis HOM05D003575 ORTHO05D003587 2.0e-07 62.4 155 28.4
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 2.6e-07 62.0 150 29.3
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 2.6e-07 62.0 250 26.0
CAN.G437.6 Capsicum annuum HOM05D003575 ORTHO05D003587 5.9e-07 60.8 131 31.3
RhsimUnG0235600 Rhododendron simsii HOM05D001613 ORTHO05D001556 1.3e-06 59.7 138 31.9
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 1.7e-06 59.3 154 24.7
AagrBONN_evm.TU.Sc2ySwM_344.2846 Anthoceros agrestis HOM05D045034 ORTHO05D003587 2.2e-06 58.9 155 29.7
SEGI_27817 Sequoiadendron giganteum HOM05D003575 ORTHO05D003587 3.8e-06 58.2 97 35.1
vmacro11051 Vaccinium macrocarpon HOM05D001613 ORTHO05D001556 3.8e-06 58.2 121 37.2
FAN16G3603 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.5e-06 57.4 276 23.2


User provided reference genes

Program Settings