Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 3.9e-100 368.2 202 100.0
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.9e-62 243.0 180 75.6
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 3.3e-22 109.4 169 47.3
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 2.6e-19 99.8 150 48.7
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 5.8e-19 98.6 131 43.5
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 7.6e-19 98.2 110 50.9
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 2.9e-18 96.3 119 45.4
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 3.8e-18 95.9 111 48.6
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 4.9e-18 95.5 111 48.6
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 4.9e-18 95.5 105 50.5
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 6.5e-18 95.1 123 46.3
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 1.1e-17 94.4 185 36.2
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 1.1e-17 94.4 128 45.3
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 1.9e-17 93.6 105 48.6
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.9e-17 93.6 128 44.5
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 1.9e-17 93.6 105 50.5
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 1.9e-17 93.6 105 50.5
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 2.5e-17 93.2 147 39.5
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 2.5e-17 93.2 105 49.5
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 3.2e-17 92.8 157 40.8
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 3.2e-17 92.8 138 44.2
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 3.2e-17 92.8 174 36.8
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 3.2e-17 92.8 108 49.1
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 3.2e-17 92.8 105 50.5
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 4.2e-17 92.4 157 40.8
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 4.2e-17 92.4 105 50.5
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 4.2e-17 92.4 105 49.5
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 4.2e-17 92.4 135 42.2
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 5.5e-17 92.0 105 49.5
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 5.5e-17 92.0 128 43.0
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 5.5e-17 92.0 105 47.6
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 7.1e-17 91.7 105 49.5
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 7.1e-17 91.7 105 48.6
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 7.1e-17 91.7 105 48.6
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 7.1e-17 91.7 105 48.6
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 7.1e-17 91.7 105 48.6
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 7.1e-17 91.7 105 49.5
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 7.1e-17 91.7 117 46.2
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 7.1e-17 91.7 128 43.8
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 9.3e-17 91.3 111 47.7
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 9.3e-17 91.3 147 38.8
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 9.3e-17 91.3 209 35.9
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 9.3e-17 91.3 128 43.0
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 1.2e-16 90.9 128 43.8
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 1.2e-16 90.9 135 44.4
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.2e-16 90.9 105 50.5
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 1.6e-16 90.5 111 45.0
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 1.6e-16 90.5 105 47.6
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 1.6e-16 90.5 105 48.6
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 1.6e-16 90.5 179 39.1
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.6e-16 90.5 111 45.0
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 1.6e-16 90.5 153 38.6
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 2.1e-16 90.1 105 48.6
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.1e-16 90.1 105 49.5
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 2.1e-16 90.1 135 41.5
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 2.1e-16 90.1 138 40.6
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 2.7e-16 89.7 153 38.6
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 3.5e-16 89.4 111 45.0
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 3.5e-16 89.4 124 45.2
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 3.5e-16 89.4 190 36.8
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.5e-16 89.4 122 45.1
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 3.5e-16 89.4 105 49.5
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 4.6e-16 89.0 111 45.0
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 4.6e-16 89.0 111 45.0
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 4.6e-16 89.0 111 45.0
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 4.6e-16 89.0 142 44.4
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 6.0e-16 88.6 111 45.0
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 7.9e-16 88.2 174 37.4
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.0e-15 87.8 135 40.0
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 1.3e-15 87.4 111 43.2
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 1.3e-15 87.4 111 44.1
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 1.3e-15 87.4 105 47.6
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 1.8e-15 87.0 144 41.0
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 1.8e-15 87.0 128 43.0
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 1.8e-15 87.0 105 46.7
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 2.3e-15 86.7 105 46.7
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 2.3e-15 86.7 200 37.0
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 3.0e-15 86.3 105 45.7
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 3.0e-15 86.3 105 46.7
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 3.0e-15 86.3 165 33.9
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 3.0e-15 86.3 128 42.2
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 3.0e-15 86.3 105 47.6
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 3.9e-15 85.9 156 37.8
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 5.1e-15 85.5 176 38.1
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 5.1e-15 85.5 151 36.4
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 6.7e-15 85.1 161 34.8
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 6.7e-15 85.1 152 39.5
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 6.7e-15 85.1 108 45.4
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 8.7e-15 84.7 139 40.3
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 8.7e-15 84.7 124 44.4
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 1.1e-14 84.3 134 41.8
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 1.1e-14 84.3 202 37.1
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 1.1e-14 84.3 108 44.4
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 1.5e-14 84.0 165 33.9
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 1.5e-14 84.0 156 37.8
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 1.5e-14 84.0 128 39.8
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 1.5e-14 84.0 139 39.6
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.9e-14 83.6 202 37.1
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 2.5e-14 83.2 139 39.6
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 4.3e-14 82.4 157 36.3
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.3e-14 82.4 202 37.1
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.7e-14 82.0 194 35.6
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 7.4e-14 81.6 129 40.3
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 9.6e-14 81.3 101 46.5
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 9.6e-14 81.3 157 38.2
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 1.3e-13 80.9 150 40.0
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.3e-13 80.9 142 40.1
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 1.6e-13 80.5 148 37.8
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 4.8e-13 79.0 86 50.0
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 6.2e-13 78.6 103 44.7
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 3.1e-12 76.3 140 34.3
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 5.3e-12 75.5 152 36.8
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.5e-11 73.9 109 44.0
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 2.0e-11 73.6 84 48.8
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 2.6e-11 73.2 88 47.7
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 3.8e-10 69.3 141 39.0
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 1.6e-08 63.9 159 32.1
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 3.5e-08 62.8 72 51.4
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 4.6e-08 62.4 106 37.7
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 1.8e-07 60.5 75 42.7
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 5.1e-07 58.9 116 41.4


User provided reference genes

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