Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_5430 Physcomitrium patens HOM05D028141 ORTHO05D026043 9.7e-92 340.1 170 100.0
Pp3c24_5520 Physcomitrium patens HOM05D028141 ORTHO05D026043 7.7e-89 330.5 169 96.4
Pp3c14_16730 Physcomitrium patens HOM05D028141 ORTHO05D026043 2.6e-84 315.5 168 93.5
Pp3c24_4880 Physcomitrium patens HOM05D000971 ORTHO05D000901 4.5e-81 304.7 169 91.1
Pp3c5_20800 Physcomitrium patens HOM05D028141 ORTHO05D026043 1.5e-79 299.7 160 91.9
Pp3c8_9790 Physcomitrium patens HOM05D000971 ORTHO05D026043 1.3e-43 180.3 171 55.6
Pp3c8_7770 Physcomitrium patens HOM05D000971 ORTHO05D000901 9.2e-34 147.5 173 47.4
Pp3c8_9550 Physcomitrium patens HOM05D000971 ORTHO05D000901 9.2e-34 147.5 173 47.4
Mapoly0039s0109 Marchantia polymorpha HOM05D000971 ORTHO05D000901 3.9e-16 89.0 129 45.7
SEGI_01466 Sequoiadendron giganteum HOM05D000971 ORTHO05D000901 4.5e-12 75.5 126 38.9
SEGI_13552 Sequoiadendron giganteum HOM05D000971 ORTHO05D000901 1.2e-09 67.4 123 39.8
PSO541G4624 Papaver somniferum HOM05D000971 ORTHO05D000901 1.3e-08 63.9 85 44.7
PSO675G6524 Papaver somniferum HOM05D000971 ORTHO05D000901 1.3e-08 63.9 85 44.7
THA.LOC104821336 Tarenaya hassleriana HOM05D000971 ORTHO05D000901 1.8e-08 63.5 107 38.3
Glyma.16G124700 Glycine max HOM05D000971 ORTHO05D000901 3.0e-08 62.8 85 47.1
ATR0712G141 Amborella trichopoda HOM05D000971 ORTHO05D000901 3.9e-08 62.4 93 45.2
CARHR160860 Cardamine hirsuta HOM05D000971 ORTHO05D000901 3.9e-08 62.4 85 44.7
ClCG01G020430 Citrullus lanatus HOM05D000971 ORTHO05D000901 3.9e-08 62.4 85 45.9
CsaV3_6G047310 Cucumis sativus L. HOM05D000971 ORTHO05D000901 5.1e-08 62.0 85 45.9
Haze_03736 Corylus avellana HOM05D000971 ORTHO05D000901 6.7e-08 61.6 85 45.9
Eucgr.J02462 Eucalyptus grandis HOM05D000971 ORTHO05D000901 6.7e-08 61.6 111 38.7
CBR_g46247 Chara braunii HOM05D000971 ORTHO05D000901 8.7e-08 61.2 59 59.3
MELO3C007922.2 Cucumis melo HOM05D000971 ORTHO05D000901 8.7e-08 61.2 119 38.7
FAN26G3068 Fragaria x ananassa HOM05D000971 ORTHO05D000901 8.7e-08 61.2 85 45.9
Oeu036569.1 Olea europaea HOM05D000971 ORTHO05D000901 8.7e-08 61.2 111 36.9
Cfa006996 Carpinus fangiana HOM05D000971 ORTHO05D000901 1.1e-07 60.8 100 40.0
Glyma.02G046200 Glycine max HOM05D000971 ORTHO05D000901 1.1e-07 60.8 85 45.9
Gohir.A11G173700 Gossypium hirsutum HOM05D000971 ORTHO05D000901 1.1e-07 60.8 85 44.7
Oeu014560.1 Olea europaea HOM05D000971 ORTHO05D000901 1.1e-07 60.8 85 43.5
Phvul.003G264900 Phaseolus vulgaris HOM05D000971 ORTHO05D000901 1.1e-07 60.8 85 45.9
VMungo0251G1809 Vigna mungo HOM05D000971 ORTHO05D000901 1.1e-07 60.8 85 45.9
AL5G31700 Arabidopsis lyrata HOM05D000971 ORTHO05D000901 1.5e-07 60.5 99 39.4
Sp5g10940 Schrenkiella parvula HOM05D000971 ORTHO05D000901 1.5e-07 60.5 85 43.5
AT3G51280 Arabidopsis thaliana HOM05D000971 ORTHO05D000901 1.9e-07 60.1 85 43.5
Thhalv10010403m.g Eutrema salsugineum HOM05D000971 ORTHO05D000901 1.9e-07 60.1 99 39.4
BcaB01g00535 Brassica carinata HOM05D000971 ORTHO05D000901 2.5e-07 59.7 94 40.4
BcaNung00391 Brassica carinata HOM05D000971 ORTHO05D000901 2.5e-07 59.7 101 38.6
Nn5g30761 Nelumbo nucifera HOM05D000971 ORTHO05D000901 2.5e-07 59.7 98 41.8
Sabra05G0091900 Salix brachista HOM05D000971 ORTHO05D000901 2.5e-07 59.7 111 35.1
Sed0015718 Sechium edule HOM05D000971 ORTHO05D000901 2.5e-07 59.7 85 44.7
Actinidia36754 Actinidia chinensis HOM05D000971 ORTHO05D000901 4.3e-07 58.9 85 42.4
C07p46270 Brassica napus HOM05D000971 ORTHO05D000901 5.6e-07 58.5 112 33.0
Sc16g0002010 Simmondsia chinensis HOM05D000971 ORTHO05D000901 5.6e-07 58.5 85 43.5
A03p48240 Brassica napus HOM05D000971 ORTHO05D000901 7.4e-07 58.2 85 42.4
SMO118G0355 Selaginella moellendorffii HOM05D000971 ORTHO05D000901 7.4e-07 58.2 45 57.8
Sed0013645 Sechium edule HOM05D000971 ORTHO05D000901 9.6e-07 57.8 118 36.4
BolC8t50269H Brassica oleracea HOM05D000971 ORTHO05D000901 1.3e-06 57.4 85 41.2
ECA246G4778 Erigeron canadensis HOM05D000971 ORTHO05D000901 1.3e-06 57.4 85 44.7
AagrBONN_evm.TU.Sc2ySwM_368.2425 Anthoceros agrestis HOM05D000971 ORTHO05D000901 2.1e-06 56.6 45 64.4
Lsat_1_v5_gn_3_72560 Lactuca sativa HOM05D000971 ORTHO05D000901 2.1e-06 56.6 85 43.5
Duzib264G0774 Durio zibethinus HOM05D000971 ORTHO05D000901 2.8e-06 56.2 85 41.2
Lalb_Chr16g0391371 Lupinus albus HOM05D000971 ORTHO05D000901 2.8e-06 56.2 87 43.7
A01p23540 Brassica napus HOM05D000971 ORTHO05D000901 3.7e-06 55.8 92 38.0
BraA01t02260Z Brassica rapa HOM05D000971 ORTHO05D000901 3.7e-06 55.8 92 38.0
TAR628G1426 Trochodendron aralioides HOM05D000971 ORTHO05D000901 4.8e-06 55.5 85 41.2
MBI09_g35942_MAGBIO Magnolia biondii HOM05D000971 ORTHO05D000901 8.1e-06 54.7 85 40.0
Os09g0538500 Oryza sativa ssp. japonica HOM05D000971 ORTHO05D000901 8.1e-06 54.7 90 37.8


User provided reference genes

Program Settings