Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 2.7e-138 495.4 252 100.0
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 9.7e-80 300.8 265 61.1
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 3.6e-74 282.3 220 64.1
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 3.0e-73 279.3 181 72.9
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 1.3e-71 273.9 247 57.5
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 4.1e-70 268.9 249 58.2
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 2.0e-69 266.5 239 59.0
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 2.0e-69 266.5 239 57.7
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 2.6e-69 266.2 229 59.0
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 2.6e-69 266.2 244 58.6
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 3.4e-69 265.8 239 58.6
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 3.4e-69 265.8 246 58.9
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 3.4e-69 265.8 244 58.6
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 3.4e-69 265.8 239 57.3
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 5.9e-69 265.0 246 55.3
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 7.7e-69 264.6 242 57.4
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 7.7e-69 264.6 242 56.6
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 7.7e-69 264.6 242 58.3
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 1.0e-68 264.2 178 68.5
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 1.0e-68 264.2 180 68.9
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.7e-68 263.5 244 57.8
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 1.7e-68 263.5 244 57.8
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 2.2e-68 263.1 244 58.6
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 2.2e-68 263.1 239 56.9
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 6.5e-68 261.5 246 56.1
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 6.5e-68 261.5 178 69.1
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 6.5e-68 261.5 239 57.3
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 8.5e-68 261.2 242 57.0
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 1.1e-67 260.8 249 57.4
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 1.4e-67 260.4 180 68.3
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 1.4e-67 260.4 242 56.6
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 1.4e-67 260.4 242 57.4
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 1.9e-67 260.0 239 56.5
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 2.5e-67 259.6 241 57.7
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 2.5e-67 259.6 239 56.5
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 3.2e-67 259.2 247 55.1
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 4.2e-67 258.8 247 56.7
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 4.2e-67 258.8 242 57.0
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 4.2e-67 258.8 239 54.8
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 5.5e-67 258.5 221 60.6
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 5.5e-67 258.5 239 57.7
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 5.5e-67 258.5 249 55.8
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 5.5e-67 258.5 251 53.8
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 9.4e-67 257.7 244 56.6
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 9.4e-67 257.7 199 63.3
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 9.4e-67 257.7 178 69.7
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 1.6e-66 256.9 249 55.4
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 2.1e-66 256.5 177 70.6
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.1e-66 256.5 245 55.9
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 2.7e-66 256.1 178 67.4
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 2.7e-66 256.1 178 67.4
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 2.7e-66 256.1 239 56.5
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 3.6e-66 255.8 221 60.6
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 4.7e-66 255.4 244 54.9
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 6.1e-66 255.0 178 69.1
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 1.0e-65 254.2 242 54.5
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 1.0e-65 254.2 180 67.8
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 1.8e-65 253.4 242 55.8
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 1.8e-65 253.4 244 56.1
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 2.3e-65 253.1 180 67.2
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.3e-65 253.1 183 64.5
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 3.0e-65 252.7 178 66.9
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 3.0e-65 252.7 174 69.0
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 3.9e-65 252.3 189 63.5
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 3.9e-65 252.3 242 55.4
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 3.9e-65 252.3 250 54.8
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 3.9e-65 252.3 243 54.3
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 6.7e-65 251.5 243 55.1
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 6.7e-65 251.5 178 65.7
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 6.7e-65 251.5 249 55.4
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 6.7e-65 251.5 239 56.1
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 1.5e-64 250.4 178 66.9
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.3e-64 249.2 180 64.4
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 5.7e-64 248.4 189 63.5
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 7.4e-64 248.1 189 63.5
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 7.4e-64 248.1 178 66.3
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 9.7e-64 247.7 178 66.9
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 1.7e-63 246.9 178 66.3
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 2.8e-63 246.1 248 53.2
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 3.7e-63 245.7 174 65.5
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 6.3e-63 245.0 243 55.6
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 1.8e-62 243.4 178 65.2
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 3.1e-62 242.7 178 65.7
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 5.3e-62 241.9 187 64.2
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 7.0e-62 241.5 187 64.2
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 2.0e-61 240.0 224 54.5
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 3.5e-61 239.2 160 70.0
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 4.5e-61 238.8 206 57.3
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 1.0e-60 237.7 181 61.3
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 1.7e-60 236.9 284 47.9
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.2e-60 236.5 268 49.3
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 6.1e-58 228.4 306 44.1
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 2.2e-55 219.9 152 69.1
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 1.8e-54 216.9 304 44.7
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 2.9e-52 209.5 244 46.7
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 3.8e-52 209.1 242 50.0
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 8.0e-50 201.4 245 46.9
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 2.3e-49 199.9 198 56.6
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 1.4e-46 190.7 255 45.5
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 1.3e-44 184.1 398 33.4
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.9e-44 183.0 142 62.0
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 3.2e-43 179.5 249 45.0
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 1.5e-40 170.6 222 42.8
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 3.4e-40 169.5 238 42.0
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 5.4e-38 162.2 109 67.9
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 5.2e-33 145.6 171 50.3
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 3.4e-32 142.9 134 56.0
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 3.4e-32 142.9 134 56.0
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.7e-31 140.6 125 57.6
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 7.0e-30 135.2 103 64.1
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 7.8e-29 131.7 142 50.7
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 5.4e-22 109.0 141 50.4
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 1.6e-21 107.5 172 43.6
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 2.7e-21 106.7 144 45.8
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 1.1e-14 84.7 54 72.2
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 9.2e-14 81.6 77 50.6
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 2.3e-12 77.0 116 44.0
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 1.4e-09 67.8 114 39.5
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.3e-09 67.0 58 53.4
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 9.9e-08 61.6 49 59.2
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 2.9e-07 60.1 45 60.0
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 8.3e-07 58.5 121 41.3


User provided reference genes

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