Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 7.5e-57 224.2 165 100.0
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 3.3e-20 102.4 145 44.8
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 7.4e-20 101.3 150 44.0
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 1.3e-19 100.5 143 41.3
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.1e-18 97.4 139 42.4
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.4e-18 97.1 139 42.4
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 3.1e-18 95.9 137 44.5
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 9.0e-18 94.4 139 41.0
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 1.2e-17 94.0 148 39.9
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 1.5e-17 93.6 137 43.8
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 2.0e-17 93.2 137 41.6
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.0e-17 93.2 148 39.2
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 3.4e-17 92.4 138 41.3
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 3.4e-17 92.4 145 39.3
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 4.5e-17 92.0 151 39.7
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 4.5e-17 92.0 143 41.3
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 4.5e-17 92.0 148 38.5
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 5.8e-17 91.7 137 41.6
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 5.8e-17 91.7 142 40.1
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 7.6e-17 91.3 137 40.1
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 7.6e-17 91.3 155 38.7
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.3e-16 90.5 148 37.8
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.3e-16 90.5 148 37.8
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 1.3e-16 90.5 136 41.2
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 1.7e-16 90.1 148 39.2
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 1.7e-16 90.1 137 40.1
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 1.7e-16 90.1 137 40.9
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.2e-16 89.7 145 38.6
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 2.9e-16 89.4 141 38.3
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 2.9e-16 89.4 136 39.7
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 2.9e-16 89.4 147 39.5
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 3.8e-16 89.0 137 39.4
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 3.8e-16 89.0 143 37.8
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 3.8e-16 89.0 137 41.6
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 4.9e-16 88.6 146 38.4
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 4.9e-16 88.6 136 41.9
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 6.4e-16 88.2 137 38.7
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 8.4e-16 87.8 150 38.0
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 8.4e-16 87.8 146 38.4
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 1.1e-15 87.4 146 37.7
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 1.1e-15 87.4 143 38.5
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 1.1e-15 87.4 141 38.3
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 1.4e-15 87.0 138 39.1
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 1.4e-15 87.0 137 38.7
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 1.4e-15 87.0 147 38.8
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 1.4e-15 87.0 147 38.8
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 1.4e-15 87.0 146 37.7
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 1.9e-15 86.7 141 38.3
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 1.9e-15 86.7 141 38.3
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 1.9e-15 86.7 143 37.1
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 1.9e-15 86.7 146 37.7
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 1.9e-15 86.7 137 38.7
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 1.9e-15 86.7 141 38.3
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 1.9e-15 86.7 137 39.4
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 2.4e-15 86.3 137 39.4
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 2.4e-15 86.3 147 38.8
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 2.4e-15 86.3 137 38.0
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 2.4e-15 86.3 137 38.0
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 4.2e-15 85.5 146 37.7
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 4.2e-15 85.5 138 37.7
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.2e-15 85.5 134 51.5
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 4.2e-15 85.5 141 37.6
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 4.2e-15 85.5 141 37.6
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 4.2e-15 85.5 137 38.0
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 5.5e-15 85.1 144 36.8
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 5.5e-15 85.1 138 37.7
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 5.5e-15 85.1 137 39.4
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 7.1e-15 84.7 146 36.3
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 9.3e-15 84.3 138 37.7
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 9.3e-15 84.3 150 37.3
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 9.3e-15 84.3 136 39.7
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 9.3e-15 84.3 138 37.7
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 1.6e-14 83.6 146 37.0
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 1.6e-14 83.6 136 38.2
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 2.7e-14 82.8 146 37.0
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 2.7e-14 82.8 146 36.3
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 2.7e-14 82.8 153 34.6
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 2.7e-14 82.8 136 37.5
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 4.6e-14 82.0 137 36.5
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 4.6e-14 82.0 137 36.5
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 4.6e-14 82.0 142 35.9
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 6.0e-14 81.6 141 35.5
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 6.0e-14 81.6 142 37.3
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 6.0e-14 81.6 142 38.0
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 6.0e-14 81.6 138 36.2
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 7.9e-14 81.3 124 42.7
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 1.0e-13 80.9 138 37.7
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 3.9e-13 79.0 137 35.8
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 5.1e-13 78.6 148 37.2
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 6.7e-13 78.2 141 35.5
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 1.1e-12 77.4 142 33.8
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 4.3e-12 75.5 155 33.5
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 5.6e-12 75.1 144 41.7
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 9.6e-12 74.3 160 56.2
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 4.5e-09 65.5 147 33.3
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 4.5e-09 65.5 138 34.8
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 2.2e-08 63.2 145 35.9
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 6.5e-08 61.6 137 32.1
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 1.2e-06 57.4 135 32.6
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 2.1e-06 56.6 112 30.4
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.6e-06 55.5 45 66.7
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 4.6e-06 55.5 102 41.2
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 4.6e-06 55.5 104 30.8
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 6.0e-06 55.1 103 34.0


User provided reference genes

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