Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_2440 Physcomitrium patens HOM05D004787 ORTHO05D313483 2.0e-59 232.3 121 100.0
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 3.2e-20 102.1 115 54.8
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 3.2e-20 102.1 115 54.8
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 7.8e-11 70.9 75 56.0
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 3.3e-09 65.5 75 54.7
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 2.8e-08 62.4 75 48.0
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 4.7e-08 61.6 93 43.0
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 6.2e-08 61.2 75 48.0
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 6.2e-08 61.2 75 48.0
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 8.1e-08 60.8 86 44.2
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 8.1e-08 60.8 75 45.3
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 1.1e-07 60.5 75 45.3
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 2.3e-07 59.3 75 46.7
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 2.3e-07 59.3 88 39.8
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 3.1e-07 58.9 75 44.0
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 3.1e-07 58.9 75 45.3
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 3.1e-07 58.9 75 45.3
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 4.0e-07 58.5 81 46.9
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 4.0e-07 58.5 75 44.0
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 4.0e-07 58.5 98 38.8
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 4.0e-07 58.5 75 44.0
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 5.2e-07 58.2 79 43.0
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 8.9e-07 57.4 74 44.6
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 8.9e-07 57.4 75 42.7
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 8.9e-07 57.4 75 42.7
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 8.9e-07 57.4 75 42.7
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 8.9e-07 57.4 84 44.0
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 1.2e-06 57.0 75 44.0
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 1.2e-06 57.0 75 42.7
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 1.2e-06 57.0 65 49.2
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 1.5e-06 56.6 75 44.0
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 1.5e-06 56.6 87 40.2
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 1.5e-06 56.6 75 44.0
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 2.0e-06 56.2 105 36.2
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 2.0e-06 56.2 76 47.4
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 2.6e-06 55.8 92 41.3
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 2.6e-06 55.8 81 44.4
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 2.6e-06 55.8 83 44.6
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 2.6e-06 55.8 75 42.7
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 3.4e-06 55.5 87 40.2
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 3.4e-06 55.5 80 43.8
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 4.4e-06 55.1 75 38.7
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 4.4e-06 55.1 75 42.7
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 4.4e-06 55.1 75 40.0
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 5.8e-06 54.7 75 42.7
HanXRQChr16g0532221 Helianthus annuus HOM05D004787 ORTHO05D006972 5.8e-06 54.7 75 41.3
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 5.8e-06 54.7 75 41.3
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 5.8e-06 54.7 75 40.0
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 5.8e-06 54.7 75 41.3
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 5.8e-06 54.7 75 40.0
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 7.6e-06 54.3 75 41.3
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 7.6e-06 54.3 75 41.3
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 7.6e-06 54.3 75 41.3
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 9.9e-06 53.9 76 42.1
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 9.9e-06 53.9 81 43.2
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 9.9e-06 53.9 75 40.0
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 9.9e-06 53.9 82 41.5
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 9.9e-06 53.9 75 40.0


User provided reference genes

Program Settings