Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_19150 Physcomitrium patens HOM05D007814 ORTHO05D009902 3.3e-206 721.5 368 100.0
Mapoly0085s0093 Marchantia polymorpha HOM05D007814 ORTHO05D009902 5.4e-79 298.9 328 51.5
Carub.0007s2955 Capsella rubella HOM05D007814 ORTHO05D009902 4.9e-72 275.8 344 46.2
Gorai.004G058700 Gossypium raimondii HOM05D007814 ORTHO05D009902 2.4e-71 273.5 301 49.8
AUR62001086 Chenopodium quinoa HOM05D007814 ORTHO05D009902 5.4e-71 272.3 270 52.6
Thecc.01G225000 Theobroma cacao HOM05D007814 ORTHO05D009902 9.2e-71 271.6 304 50.3
Gohir.D08G057500 Gossypium hirsutum HOM05D007814 ORTHO05D009902 4.5e-70 269.2 301 49.2
Gohir.A08G047100 Gossypium hirsutum HOM05D007814 ORTHO05D009902 1.0e-69 268.1 301 49.2
COL.COLO4_15688 Corchorus olitorius HOM05D007814 ORTHO05D009902 1.3e-69 267.7 271 53.9
Thhalv10025557m.g Eutrema salsugineum HOM05D007814 ORTHO05D009902 1.3e-69 267.7 229 56.3
ECA236G4680 Erigeron canadensis HOM05D007814 ORTHO05D009902 1.7e-69 267.3 293 51.2
Eucgr.H00797 Eucalyptus grandis HOM05D007814 ORTHO05D009902 5.0e-69 265.8 341 44.6
PSO063G1792 Papaver somniferum HOM05D007814 ORTHO05D009902 1.1e-68 264.6 301 49.8
TPR.G9308 Trifolium pratense HOM05D007814 ORTHO05D009902 1.1e-68 264.6 346 43.9
TWI75G1564 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 1.1e-68 264.6 340 45.6
Sopen09g023730 Solanum pennellii HOM05D007814 ORTHO05D009902 1.5e-68 264.2 276 51.4
MSTRG.18850 Avicennia marina HOM05D007814 ORTHO05D009902 1.9e-68 263.8 272 50.4
C04p42800 Brassica napus HOM05D007814 ORTHO05D009902 1.9e-68 263.8 227 56.4
BolC4t25846H Brassica oleracea HOM05D007814 ORTHO05D009902 1.9e-68 263.8 227 56.4
BraA04t16587Z Brassica rapa HOM05D007814 ORTHO05D009902 1.9e-68 263.8 228 55.7
PSO017G6744 Papaver somniferum HOM05D007814 ORTHO05D009902 2.5e-68 263.5 299 48.8
A04p08910 Brassica napus HOM05D007814 ORTHO05D009902 4.3e-68 262.7 230 55.7
Cc01_g16980 Coffea canephora HOM05D007814 ORTHO05D009902 4.3e-68 262.7 266 51.5
Duzib138G0957 Durio zibethinus HOM05D007814 ORTHO05D009902 4.3e-68 262.7 302 48.3
Potri.002G242800 Populus trichocarpa HOM05D007814 ORTHO05D009902 4.3e-68 262.7 314 47.1
TAR362G0330 Trochodendron aralioides HOM05D007814 ORTHO05D009902 4.3e-68 262.7 309 49.2
Solyc09g060100.3 Solanum lycopersicum HOM05D007814 ORTHO05D009902 5.6e-68 262.3 278 50.4
EL10Ac7g17844 Beta vulgaris HOM05D007814 ORTHO05D009902 7.3e-68 261.9 270 50.7
FAN15G0488 Fragaria x ananassa HOM05D007814 ORTHO05D009902 7.3e-68 261.9 270 51.1
Cpa.g.sc8.150 Carica papaya HOM05D007814 ORTHO05D009902 9.5e-68 261.5 304 46.1
Lsat_1_v5_gn_8_89880 Lactuca sativa HOM05D007814 ORTHO05D009902 9.5e-68 261.5 284 49.6
SalBow6G5719 Salvia bowleyana HOM05D007814 ORTHO05D009902 1.2e-67 261.2 378 45.0
CARHR218600 Cardamine hirsuta HOM05D007814 ORTHO05D009902 2.1e-67 260.4 303 46.9
HanXRQChr04g0108161 Helianthus annuus HOM05D007814 ORTHO05D009902 2.1e-67 260.4 316 47.5
Nitab4.5_0000045g0290 Nicotiana tabacum HOM05D007814 ORTHO05D009902 2.1e-67 260.4 294 48.3
Oeu022249.1 Olea europaea HOM05D007814 ORTHO05D009902 2.1e-67 260.4 294 48.3
BcaC02g09443 Brassica carinata HOM05D007814 ORTHO05D009902 2.8e-67 260.0 227 55.1
Nitab4.5_0003758g0030 Nicotiana tabacum HOM05D007814 ORTHO05D009902 3.6e-67 259.6 292 48.3
vmacro14751 Vaccinium macrocarpon HOM05D007814 ORTHO05D009902 3.6e-67 259.6 275 50.2
FvH4_2g19010 Fragaria vesca HOM05D007814 ORTHO05D009902 1.0e-66 258.1 270 50.4
Migut.D02523 Erythranthe guttata HOM05D007814 ORTHO05D009902 1.4e-66 257.7 308 47.4
AL9U10890 Arabidopsis lyrata HOM05D007814 ORTHO05D009902 1.8e-66 257.3 234 54.3
Sp7g10540 Schrenkiella parvula HOM05D007814 ORTHO05D009902 1.8e-66 257.3 232 55.2
Ca_05138_v3 Cicer arietinum L. HOM05D007814 ORTHO05D009902 5.2e-66 255.8 269 47.2
THA.LOC104809110 Tarenaya hassleriana HOM05D007814 ORTHO05D009902 5.2e-66 255.8 217 58.1
ATR1145G089 Amborella trichopoda HOM05D007814 ORTHO05D009902 6.8e-66 255.4 240 55.0
Nn1g07865 Nelumbo nucifera HOM05D007814 ORTHO05D009902 6.8e-66 255.4 322 47.5
Peaxi162Scf00107g02025 Petunia axillaris HOM05D007814 ORTHO05D009902 2.0e-65 253.8 276 49.6
Aa31LG9G4780 Aethionema arabicum HOM05D007814 ORTHO05D009902 2.6e-65 253.4 277 50.2
Medtr7g057180 Medicago truncatula HOM05D007814 ORTHO05D009902 2.6e-65 253.4 282 46.1
AUR62008915 Chenopodium quinoa HOM05D007814 ORTHO05D009902 4.4e-65 252.7 311 46.6
FAN27G1054 Fragaria x ananassa HOM05D007814 ORTHO05D009902 7.5e-65 251.9 270 50.4
Aqoxy2G03872 Aquilegia oxysepala HOM05D007814 ORTHO05D009902 9.8e-65 251.5 237 52.7
Prupe.8G202300 Prunus persica HOM05D007814 ORTHO05D009902 1.7e-64 250.8 278 48.9
HPP92_021384 Vanilla planifolia HOM05D007814 ORTHO05D009902 1.7e-64 250.8 272 51.1
Sc05g0002160 Simmondsia chinensis HOM05D007814 ORTHO05D009902 2.2e-64 250.4 279 48.7
QL09p054446 Quercus lobata HOM05D007814 ORTHO05D009902 6.4e-64 248.8 270 48.9
Lj1g0000473 Lotus japonicus HOM05D007814 ORTHO05D009902 8.3e-64 248.4 268 47.4
MD05G1174800 Malus domestica HOM05D007814 ORTHO05D009902 8.3e-64 248.4 270 48.1
PGR083G1478 Punica granatum HOM05D007814 ORTHO05D009902 1.4e-63 247.7 202 59.4
Lalb_Chr19g0125641 Lupinus albus HOM05D007814 ORTHO05D009902 1.9e-63 247.3 268 47.4
CANSAT01G1281 Cannabis sativa HOM05D007814 ORTHO05D009902 7.0e-63 245.4 277 48.0
Psat3g145840 Pisum sativum HOM05D007814 ORTHO05D009902 7.0e-63 245.4 283 45.2
Actinidia23722 Actinidia chinensis HOM05D007814 ORTHO05D009902 1.2e-62 244.6 207 57.5
Haze_24806 Corylus avellana HOM05D007814 ORTHO05D009902 9.5e-60 235.0 222 53.6
Ciclev10020793m.g Citrus clementina HOM05D007814 ORTHO05D009902 3.7e-56 223.0 289 44.3
AUR62001089 Chenopodium quinoa HOM05D007814 ORTHO05D009902 6.6e-53 212.2 256 47.3
Rhsim01G0255600 Rhododendron simsii HOM05D007814 ORTHO05D009902 1.5e-52 211.1 183 55.7
A05p28990 Brassica napus HOM05D007814 ORTHO05D009902 3.4e-49 199.9 232 46.1
PGSC0003DMG400017662 Solanum tuberosum HOM05D007814 ORTHO05D009902 1.9e-47 194.1 253 46.2
DCAR_012647 Daucus carota HOM05D007814 ORTHO05D009902 1.3e-45 188.0 148 60.8
AT4G13150 Arabidopsis thaliana HOM05D007814 ORTHO05D009902 1.1e-44 184.9 158 55.7
Hund18384 Selenicereus undatus HOM05D007814 ORTHO05D009902 6.2e-43 179.1 283 40.6
GSVIVG01028673001 Vitis vinifera HOM05D007814 ORTHO05D009902 6.2e-43 179.1 303 40.6
FAN24G2056 Fragaria x ananassa HOM05D007814 ORTHO05D009902 8.1e-43 178.7 270 40.0
RcHm_v2.0_Chr6g0284801 Rosa chinensis HOM05D007814 ORTHO05D009902 1.5e-41 174.5 199 47.7
BraA05t21782Z Brassica rapa HOM05D007814 ORTHO05D009902 5.4e-39 166.0 228 41.2
SMO351G0286 Selaginella moellendorffii HOM05D007814 ORTHO05D009902 1.6e-38 164.5 127 63.8
SMO119G0517 Selaginella moellendorffii HOM05D007814 ORTHO05D009902 4.6e-38 162.9 127 63.0
Manes.13G047600 Manihot esculenta HOM05D007814 ORTHO05D009902 1.0e-37 161.8 216 42.6
unitig_26.g9442 Utricularia gibba HOM05D001030 ORTHO05D002278 6.0e-30 136.0 135 49.6
CDE05G3049 Ceratophyllum demersum HOM05D007814 ORTHO05D009902 4.0e-26 123.2 193 41.5
PRCOL_00001446 Prasinoderma coloniale HOM05D007814 ORTHO05D009902 2.1e-14 84.3 206 33.0
TWI36G0737 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 1.0e-13 82.0 159 37.1
GSVIVG01028671001 Vitis vinifera HOM05D007814 ORTHO05D009902 5.1e-13 79.7 67 56.7


User provided reference genes

Program Settings