Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_19020 Physcomitrium patens HOM05D026724 ORTHO05D026055 8.9e-268 926.4 480 100.0
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.3e-58 230.7 491 38.5
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.3e-50 204.1 491 35.6
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 7.3e-36 156.0 351 37.0
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.2e-35 155.2 349 35.2
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 3.4e-25 120.6 162 38.3
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 7.1e-23 112.8 241 32.4
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.2e-22 112.1 193 34.7
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.3e-21 107.8 225 32.0
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.3e-21 107.8 225 32.0
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 5.1e-21 106.7 141 36.9
Pp3c26_7470 Physcomitrium patens HOM05D026724 ORTHO05D020966 6.6e-21 106.3 216 31.9
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 5.6e-20 103.2 139 36.0
Pp3c3_13770 Physcomitrium patens HOM05D026724 ORTHO05D020966 2.2e-16 91.3 139 36.7
Pp3c13_19300 Physcomitrium patens HOM05D026724 ORTHO05D020966 3.8e-16 90.5 296 27.0
Pp3c22_14520 Physcomitrium patens HOM05D016224 ORTHO05D023076 3.2e-15 87.4 170 33.5
Manes.04G153800 Manihot esculenta HOM05D000085 ORTHO05D006184 5.5e-15 86.7 264 29.5
AagrBONN_evm.TU.Sc2ySwM_228.2886 Anthoceros agrestis HOM05D000085 ORTHO05D001756 1.0e-13 82.4 138 33.3
PSO675G2913 Papaver somniferum HOM05D000085 ORTHO05D006184 1.0e-13 82.4 159 33.3
Pp3c19_13560 Physcomitrium patens HOM05D016224 ORTHO05D023076 3.0e-13 80.9 190 30.5
Pp3c8_1070 Physcomitrium patens HOM05D000085 ORTHO05D001756 3.9e-13 80.5 284 26.1
DCAR_029721 Daucus carota HOM05D000085 ORTHO05D006184 6.7e-13 79.7 152 28.3
PSO541G3755 Papaver somniferum HOM05D000085 ORTHO05D006184 2.1e-11 74.7 170 31.8
Thecc.10G132100 Theobroma cacao HOM05D000085 ORTHO05D006184 3.7e-11 73.9 216 23.6
Actinidia24490 Actinidia chinensis HOM05D000085 ORTHO05D006184 1.1e-10 72.4 188 29.3
Potri.003G189850 Populus trichocarpa HOM05D000085 ORTHO05D006184 1.1e-10 72.4 159 25.2
Actinidia01698 Actinidia chinensis HOM05D000085 ORTHO05D006184 1.4e-10 72.0 182 26.9
Pp3c17_19290 Physcomitrium patens HOM05D000085 ORTHO05D001756 1.8e-10 71.6 194 25.3
Sed0010025 Sechium edule HOM05D000085 ORTHO05D009791 1.8e-10 71.6 242 24.4
FAN06G0172 Fragaria x ananassa HOM05D000085 ORTHO05D006184 5.3e-10 70.1 177 24.9
FAN06G0213 Fragaria x ananassa HOM05D000085 ORTHO05D006184 5.3e-10 70.1 177 24.9
Lj2A829G58 Lonicera japonica HOM05D000085 ORTHO05D006184 5.3e-10 70.1 234 25.2
Potri.005G185500 Populus trichocarpa HOM05D000085 ORTHO05D009791 1.5e-09 68.6 200 27.0
FAN03G0175 Fragaria x ananassa HOM05D000085 ORTHO05D006184 2.0e-09 68.2 177 24.9
Aqoxy2G00032 Aquilegia oxysepala HOM05D000085 ORTHO05D006184 3.4e-09 67.4 157 27.4
FAN01G1090 Fragaria x ananassa HOM05D000085 ORTHO05D006184 3.4e-09 67.4 177 24.9
Lj9A652T57 Lonicera japonica HOM05D000085 ORTHO05D006184 7.6e-09 66.2 299 24.7
CSS0024542 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D009791 1.0e-08 65.9 168 29.2
AagrBONN_evm.TU.Sc2ySwM_117.1414 Anthoceros agrestis HOM05D016224 ORTHO05D010508 1.7e-08 65.1 250 24.0
COL.COLO4_32861 Corchorus olitorius HOM05D000085 ORTHO05D006184 2.2e-08 64.7 268 23.9
MBI19_g24735_MAGBIO Magnolia biondii HOM05D000085 ORTHO05D006184 2.2e-08 64.7 151 28.5
MELO3C008431.2 Cucumis melo HOM05D000085 ORTHO05D009791 2.9e-08 64.3 185 25.4
PGR031G0712 Punica granatum HOM05D000085 ORTHO05D006184 4.9e-08 63.5 256 25.0
CAN.G46.6 Capsicum annuum HOM05D000085 ORTHO05D009791 1.4e-07 62.0 168 27.4
PGR031G1477 Punica granatum HOM05D008363 ORTHO05D010508 1.4e-07 62.0 203 26.1
ClCG08G006270 Citrullus lanatus HOM05D000085 ORTHO05D009791 3.2e-07 60.8 162 25.9
Duzib093G0943 Durio zibethinus HOM05D000085 ORTHO05D009791 3.2e-07 60.8 166 29.5
TWI79G0144 Tripterygium wilfordii HOM05D000085 ORTHO05D006184 3.2e-07 60.8 155 23.9
TAR628G0721 Trochodendron aralioides HOM05D000085 ORTHO05D009791 3.2e-07 60.8 158 25.9
CsaV3_6G031170 Cucumis sativus L. HOM05D000085 ORTHO05D009791 4.2e-07 60.5 159 24.5
Manes.01G176300 Manihot esculenta HOM05D000085 ORTHO05D006184 4.2e-07 60.5 182 24.2
Mapoly0095s0067 Marchantia polymorpha HOM05D008363 ORTHO05D010508 4.2e-07 60.5 151 33.1
Duzib128G0691 Durio zibethinus HOM05D000085 ORTHO05D006184 5.5e-07 60.1 295 24.4
COL.COLO4_07812 Corchorus olitorius HOM05D000085 ORTHO05D009791 9.3e-07 59.3 178 27.5
Lj6g0021794 Lotus japonicus HOM05D000085 ORTHO05D015977 9.3e-07 59.3 190 25.8
Haze_02957 Corylus avellana HOM05D000085 ORTHO05D006184 1.2e-06 58.9 136 25.0
Sopen04g026290 Solanum pennellii HOM05D000085 ORTHO05D009791 1.2e-06 58.9 168 25.6
Aqoxy6G00345 Aquilegia oxysepala HOM05D000085 ORTHO05D009791 1.6e-06 58.5 131 27.5
Lj4A685T34 Lonicera japonica HOM05D000085 ORTHO05D009791 1.6e-06 58.5 162 27.2
Prupe.5G035100 Prunus persica HOM05D008363 ORTHO05D010508 2.1e-06 58.2 187 28.9
Solyc04g063370.3 Solanum lycopersicum HOM05D000085 ORTHO05D009791 2.7e-06 57.8 168 25.6
DCAR_031504 Daucus carota HOM05D000085 ORTHO05D009791 3.5e-06 57.4 188 27.1
FAN04G2847 Fragaria x ananassa HOM05D008363 ORTHO05D010508 3.5e-06 57.4 153 28.1
Lsat_1_v5_gn_7_31301 Lactuca sativa HOM05D000085 ORTHO05D006184 3.5e-06 57.4 214 25.7
Prupe.8G012500 Prunus persica HOM05D000085 ORTHO05D009791 3.5e-06 57.4 161 28.6
TWI60G0672 Tripterygium wilfordii HOM05D000085 ORTHO05D009791 3.5e-06 57.4 163 23.9
FAN08G0799 Fragaria x ananassa HOM05D008363 ORTHO05D010508 4.6e-06 57.0 150 28.0
FAN13G1991 Fragaria x ananassa HOM05D008363 ORTHO05D010508 4.6e-06 57.0 153 28.1
FAN18G1001 Fragaria x ananassa HOM05D008363 ORTHO05D010508 4.6e-06 57.0 153 28.1
FAN10G2237 Fragaria x ananassa HOM05D000085 ORTHO05D006184 6.0e-06 56.6 161 25.5
FAN27G0973 Fragaria x ananassa HOM05D000085 ORTHO05D009791 6.0e-06 56.6 161 28.6
Prupe.2G050000 Prunus persica HOM05D000085 ORTHO05D006184 6.0e-06 56.6 127 25.2
Dinv03741 Davidia involucrata HOM05D000085 ORTHO05D006184 7.9e-06 56.2 111 31.5
ECA236G4574 Erigeron canadensis HOM05D000085 ORTHO05D006184 7.9e-06 56.2 140 28.6
FvH4_2g15260 Fragaria vesca HOM05D000085 ORTHO05D009791 7.9e-06 56.2 161 28.6
FvH4_5g22141 Fragaria vesca HOM05D008363 ORTHO05D010508 7.9e-06 56.2 153 28.1
FAN15G3404 Fragaria x ananassa HOM05D000085 ORTHO05D009791 7.9e-06 56.2 161 28.6
Lsat_1_v5_gn_2_96380 Lactuca sativa HOM05D000085 ORTHO05D006184 7.9e-06 56.2 131 26.0


User provided reference genes

Program Settings