Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_17160 Physcomitrium patens HOM05D005223 ORTHO05D006449 0.0e+00 2113.2 1088 100.0
Mapoly0075s0016 Marchantia polymorpha HOM05D005223 ORTHO05D006449 1.4e-196 691.0 1111 39.3
CsaV3_1G009290 Cucumis sativus L. HOM05D005223 ORTHO05D006449 1.3e-170 604.7 1086 35.5
MELO3C002332.2 Cucumis melo HOM05D005223 ORTHO05D006449 2.2e-168 597.4 1092 35.3
ATR0824G104 Amborella trichopoda HOM05D005223 ORTHO05D006449 2.8e-168 597.0 1052 36.1
Nn4g22461 Nelumbo nucifera HOM05D005223 ORTHO05D006449 3.1e-167 593.6 1079 35.2
QL10p005060 Quercus lobata HOM05D005223 ORTHO05D006449 6.9e-167 592.4 1087 35.9
PSO063G1058 Papaver somniferum HOM05D005223 ORTHO05D006449 9.1e-167 592.0 1055 36.7
TAR629G2346 Trochodendron aralioides HOM05D005223 ORTHO05D006449 1.2e-166 591.7 1053 36.4
TWI14G1297 Tripterygium wilfordii HOM05D005223 ORTHO05D006449 4.5e-166 589.7 1070 36.7
Cfa018892 Carpinus fangiana HOM05D005223 ORTHO05D006449 1.3e-165 588.2 1087 36.2
Sed0011232 Sechium edule HOM05D005223 ORTHO05D006449 3.8e-165 586.6 1078 34.9
ClCG03G003490 Citrullus lanatus HOM05D005223 ORTHO05D006449 1.1e-164 585.1 1097 35.2
Os02g0598800 Oryza sativa ssp. japonica HOM05D005223 ORTHO05D006449 4.2e-164 583.2 1088 35.8
MSTRG.11293 Avicennia marina HOM05D005223 ORTHO05D006449 9.4e-164 582.0 1085 36.3
Atru.chr9.1012 Acer truncatum HOM05D005223 ORTHO05D006449 1.6e-163 581.3 1078 35.1
CSS0037650 Camellia sinensis var. sinensis HOM05D005223 ORTHO05D006449 2.1e-163 580.9 997 37.4
Ca_16089_v3 Cicer arietinum L. HOM05D005223 ORTHO05D006449 3.6e-163 580.1 1060 35.5
Manes.06G115300 Manihot esculenta HOM05D005223 ORTHO05D006449 7.9e-163 578.9 1071 35.2
Thecc.03G122800 Theobroma cacao HOM05D005223 ORTHO05D006449 5.1e-162 576.2 1078 35.3
Aqoxy5G03583 Aquilegia oxysepala HOM05D005223 ORTHO05D006449 8.8e-162 575.5 1082 35.7
Ciclev10018616m.g Citrus clementina HOM05D005223 ORTHO05D006449 1.5e-161 574.7 1085 35.9
Hma1.2p1_0123F.1_g058130 Hydrangea macrophylla HOM05D005223 ORTHO05D006449 2.6e-161 573.9 1067 35.6
Gohir.D07G057900 Gossypium hirsutum HOM05D005223 ORTHO05D006449 5.7e-161 572.8 1077 35.3
Medtr3g075100 Medicago truncatula HOM05D005223 ORTHO05D006449 9.7e-161 572.0 1074 35.1
TPR.G13978 Trifolium pratense HOM05D005223 ORTHO05D006449 1.3e-160 571.6 1059 35.1
Glyma.04G193000 Glycine max HOM05D005223 ORTHO05D006449 2.8e-160 570.5 1054 35.3
GSVIVG01007540001 Vitis vinifera HOM05D005223 ORTHO05D006449 2.8e-160 570.5 1011 37.4
Haze_07276 Corylus avellana HOM05D005223 ORTHO05D006449 6.3e-160 569.3 1087 35.4
Dinv38469 Davidia involucrata HOM05D005223 ORTHO05D006449 6.3e-160 569.3 984 37.5
Gorai.001G061400 Gossypium raimondii HOM05D005223 ORTHO05D006449 1.4e-159 568.2 1077 35.0
HanXRQChr05g0154741 Helianthus annuus HOM05D005223 ORTHO05D006449 1.4e-159 568.2 1064 35.3
Prupe.5G157000 Prunus persica HOM05D005223 ORTHO05D006449 1.4e-159 568.2 1076 36.4
Gohir.A07G053500 Gossypium hirsutum HOM05D005223 ORTHO05D006449 1.8e-159 567.8 1059 35.5
RcHm_v2.0_Chr7g0191161 Rosa chinensis HOM05D005223 ORTHO05D006449 5.3e-159 566.2 1047 36.2
SGA_v2.0_scaffold457G51932 Striga asiatica HOM05D005223 ORTHO05D006449 9.1e-159 565.5 1071 36.1
Lj1g0000662 Lotus japonicus HOM05D005223 ORTHO05D006449 1.2e-158 565.1 1080 35.0
Phvul.009G168800 Phaseolus vulgaris HOM05D005223 ORTHO05D006449 1.2e-158 565.1 1059 34.5
Potri.015G090700 Populus trichocarpa HOM05D005223 ORTHO05D006449 1.2e-158 565.1 1085 34.8
Lalb_Chr08g0236961 Lupinus albus HOM05D005223 ORTHO05D006449 2.0e-158 564.3 1071 35.4
DCAR_021603 Daucus carota HOM05D005223 ORTHO05D006449 2.6e-158 563.9 1078 35.4
Rhsim08G0185000 Rhododendron simsii HOM05D005223 ORTHO05D006449 3.4e-158 563.5 1070 34.3
MD14G1163600 Malus domestica HOM05D005223 ORTHO05D006449 4.5e-158 563.1 1056 36.0
Lsat_1_v5_gn_5_13240 Lactuca sativa HOM05D005223 ORTHO05D006449 5.9e-158 562.8 1050 36.1
CDE02G2587 Ceratophyllum demersum HOM05D005223 ORTHO05D006449 7.7e-158 562.4 989 36.0
Cc04_g10370 Coffea canephora HOM05D005223 ORTHO05D006449 7.7e-158 562.4 1045 36.7
FAN18G3380 Fragaria x ananassa HOM05D005223 ORTHO05D006449 2.2e-157 560.8 1051 36.1
THA.LOC104818196 Tarenaya hassleriana HOM05D005223 ORTHO05D006449 2.2e-157 560.8 1042 36.2
CANSAT80G2773 Cannabis sativa HOM05D005223 ORTHO05D006449 5.0e-157 559.7 1072 35.4
AL5G27880 Arabidopsis lyrata HOM05D005223 ORTHO05D006449 1.4e-156 558.1 1057 35.6
Zm00001eb246300 Zea mays HOM05D005223 ORTHO05D006449 2.5e-156 557.4 1093 34.2
FvH4_5g07490 Fragaria vesca HOM05D005223 ORTHO05D006449 3.2e-156 557.0 1056 36.0
FAN04G2946 Fragaria x ananassa HOM05D005223 ORTHO05D006449 4.2e-156 556.6 1052 35.9
ECA246G2102 Erigeron canadensis HOM05D005223 ORTHO05D006449 2.1e-155 554.3 1072 35.5
CAN.G1110.40 Capsicum annuum HOM05D005223 ORTHO05D006449 2.7e-155 553.9 1041 36.5
SalBow5G2547 Salvia bowleyana HOM05D005223 ORTHO05D006449 4.7e-155 553.1 1066 35.3
AT3G48470 Arabidopsis thaliana HOM05D005223 ORTHO05D006449 6.1e-155 552.7 1050 35.0
VMungo1309G0017 Vigna mungo HOM05D005223 ORTHO05D006449 6.1e-155 552.7 1089 34.0
FAN13G2650 Fragaria x ananassa HOM05D005223 ORTHO05D006449 8.0e-155 552.4 1057 35.9
Carub.0005s1465 Capsella rubella HOM05D005223 ORTHO05D006449 1.4e-154 551.6 1060 34.7
CARHR157230 Cardamine hirsuta HOM05D005223 ORTHO05D006449 1.8e-154 551.2 1058 34.8
Sopen10g002700 Solanum pennellii HOM05D005223 ORTHO05D006449 3.9e-154 550.1 1051 36.4
PGSC0003DMG400025026 Solanum tuberosum HOM05D005223 ORTHO05D006449 5.2e-154 549.7 1045 36.1
Sp5g13560 Schrenkiella parvula HOM05D005223 ORTHO05D006449 6.7e-154 549.3 1068 34.7
Solyc10g006780.4 Solanum lycopersicum HOM05D005223 ORTHO05D006449 6.7e-154 549.3 1042 36.2
Lj9C475T6 Lonicera japonica HOM05D005223 ORTHO05D006449 1.1e-153 548.5 1074 34.5
Eucgr.L01337 Eucalyptus grandis HOM05D005223 ORTHO05D006449 1.5e-153 548.1 1070 35.8
SMO367G0489 Selaginella moellendorffii HOM05D005223 ORTHO05D006449 2.8e-152 543.9 1029 36.2
BcaB02g10650 Brassica carinata HOM05D005223 ORTHO05D006449 1.1e-151 542.0 1000 35.8
A06p27680 Brassica napus HOM05D005223 ORTHO05D006449 1.4e-151 541.6 1068 34.6
Migut.I00475 Erythranthe guttata HOM05D005223 ORTHO05D006449 1.8e-151 541.2 1078 34.4
Nitab4.5_0002775g0020 Nicotiana tabacum HOM05D005223 ORTHO05D006449 1.8e-151 541.2 1064 35.7
BcaC01g02344 Brassica carinata HOM05D005223 ORTHO05D006449 2.4e-151 540.8 1061 34.5
AUR62001278 Chenopodium quinoa HOM05D005223 ORTHO05D006449 1.6e-150 538.1 998 35.4
C03p66340 Brassica napus HOM05D005223 ORTHO05D006449 2.0e-150 537.7 1061 34.4
vmacro19239 Vaccinium macrocarpon HOM05D005223 ORTHO05D006449 4.5e-150 536.6 1131 33.2
Peaxi162Scf00536g00422 Petunia axillaris HOM05D005223 ORTHO05D006449 1.3e-149 535.0 963 37.0
Nitab4.5_0000955g0070 Nicotiana tabacum HOM05D005223 ORTHO05D006449 2.9e-149 533.9 1070 35.5
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 5.0e-149 533.1 1042 35.1
BraA06t25704Z Brassica rapa HOM05D005223 ORTHO05D006449 6.5e-149 532.7 1067 34.6
AUR62025728 Chenopodium quinoa HOM05D005223 ORTHO05D006449 1.1e-148 531.9 1008 35.2
arahy.Tifrunner.gnm1.ann1.D4E4RT Arachis hypogaea HOM05D005223 ORTHO05D006449 1.5e-148 531.6 1075 33.9
Sc10g0010350 Simmondsia chinensis HOM05D005223 ORTHO05D006449 3.2e-148 530.4 1007 34.4
Duzib084G0239 Durio zibethinus HOM05D005223 ORTHO05D006449 4.7e-147 526.6 1058 34.1
PGR083G1937 Punica granatum HOM05D005223 ORTHO05D006449 8.2e-144 515.8 1087 34.0
BolC3t18905H Brassica oleracea HOM05D005223 ORTHO05D006449 1.8e-143 514.6 1081 33.6
COL.COLO4_09267 Corchorus olitorius HOM05D005223 ORTHO05D006449 1.8e-143 514.6 855 37.2
EL10Ac7g18074 Beta vulgaris HOM05D005223 ORTHO05D006449 6.1e-139 499.6 986 34.1
CiPaw.12G035700 Carya illinoinensis HOM05D005223 ORTHO05D006449 1.8e-135 488.0 974 34.3
SGA_v2.0_scaffold50G18602 Striga asiatica HOM05D005223 ORTHO05D006449 9.1e-135 485.7 913 36.7
Thhalv10010098m.g Eutrema salsugineum HOM05D005223 ORTHO05D006449 6.5e-133 479.6 1066 32.5
Psat5g141880 Pisum sativum HOM05D005223 ORTHO05D006449 5.5e-132 476.5 959 34.0
Hund18539 Selenicereus undatus HOM05D005223 ORTHO05D006449 1.7e-128 464.9 1001 32.7
CBR_g45764 Chara braunii HOM05D005223 ORTHO05D006449 4.1e-127 460.3 1240 29.4
arahy.Tifrunner.gnm1.ann1.9N92ER Arachis hypogaea HOM05D005223 ORTHO05D006449 5.9e-126 456.4 807 35.3
CBR_g52378 Chara braunii HOM05D005223 ORTHO05D006449 5.2e-122 443.4 1255 28.9
Os02g0599100 Oryza sativa ssp. japonica HOM05D005223 ORTHO05D006449 2.4e-119 434.5 718 38.9
Os02g0598400 Oryza sativa ssp. japonica HOM05D005223 ORTHO05D006449 2.0e-118 431.4 726 38.4
Glyma.06G172900 Glycine max HOM05D005223 ORTHO05D006449 5.0e-117 426.8 773 34.4
Aa31LG4G17060 Aethionema arabicum HOM05D005223 ORTHO05D006449 4.0e-98 364.0 640 37.3
Eucgr.B00148 Eucalyptus grandis HOM05D005223 ORTHO05D006449 4.3e-92 344.0 1078 29.1
SHI10647 Sapria himalayana HOM05D005223 ORTHO05D006449 9.9e-81 306.2 562 36.7
Cpa.g.sc52.35 Carica papaya HOM05D005223 ORTHO05D006449 4.5e-73 280.8 591 35.5
CSS0005553 Camellia sinensis var. sinensis HOM05D005223 ORTHO05D006449 5.8e-73 280.4 615 33.7
Oeu007006.1 Olea europaea HOM05D005223 ORTHO05D006449 9.9e-73 279.6 367 44.4
Actinidia19387 Actinidia chinensis HOM05D005223 ORTHO05D006449 3.4e-65 254.6 531 32.6
Aa31LG4G17050 Aethionema arabicum HOM05D005223 ORTHO05D006449 5.0e-32 144.4 465 27.3
Oeu057221.1 Olea europaea HOM05D005223 ORTHO05D006449 1.1e-31 143.3 383 29.0
FvH4_5g07461 Fragaria vesca HOM05D005223 ORTHO05D006449 1.5e-31 142.9 330 30.6
Cre03.g186550 Chlamydomonas reinhardtii HOM05D005223 ORTHO05D006449 5.7e-28 131.0 462 29.2
FvH4_3g25520 Fragaria vesca HOM05D005223 ORTHO05D006449 1.5e-20 106.3 279 28.7
PRCOL_00001784 Prasinoderma coloniale HOM05D005223 ORTHO05D006449 2.6e-20 105.5 428 30.4
AagrBONN_evm.TU.Sc2ySwM_228.970 Anthoceros agrestis HOM05D005223 ORTHO05D006449 5.7e-20 104.4 242 32.2
SEGI_02888 Sequoiadendron giganteum HOM05D005223 ORTHO05D006449 2.2e-19 102.4 249 31.7
MD06G1153900 Malus domestica HOM05D005223 ORTHO05D006449 2.8e-19 102.1 169 40.2
Nn8g40428 Nelumbo nucifera HOM05D005223 ORTHO05D006449 6.3e-19 100.9 169 36.7
SEGI_05777 Sequoiadendron giganteum HOM05D005223 ORTHO05D006449 7.0e-18 97.4 158 34.2
MBI11_g36316_MAGBIO Magnolia biondii HOM05D005223 ORTHO05D006449 1.6e-17 96.3 247 31.6
Cpa.g.sc52.34 Carica papaya HOM05D005223 ORTHO05D006449 2.9e-16 92.0 379 23.2
Lsat_1_v5_gn_0_22080 Lactuca sativa HOM05D005223 ORTHO05D006449 3.5e-09 68.6 121 32.2
FvH4_5g07361 Fragaria vesca HOM05D005223 ORTHO05D006449 5.9e-09 67.8 201 27.9
Nn7g38107 Nelumbo nucifera HOM05D005223 ORTHO05D006449 5.9e-09 67.8 107 42.1
MCO03G522 Micromonas commoda HOM05D005223 ORTHO05D006449 2.9e-08 65.5 1042 20.0
SalBow5G3736 Salvia bowleyana HOM05D005223 ORTHO05D006449 3.9e-08 65.1 78 39.7


User provided reference genes

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