Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 3.6e-194 681.4 345 100.0
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 4.4e-51 206.1 323 39.9
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 1.6e-48 197.6 312 39.1
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 1.7e-47 194.1 315 38.4
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 3.9e-47 193.0 343 37.3
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 5.1e-47 192.6 326 37.7
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 5.1e-47 192.6 296 38.5
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 8.6e-47 191.8 297 39.4
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.2e-45 188.0 290 39.3
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 2.8e-45 186.8 300 39.7
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 4.7e-45 186.0 266 41.0
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 4.7e-45 186.0 291 38.8
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 6.2e-45 185.7 304 39.5
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 1.4e-44 184.5 346 36.7
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 1.8e-44 184.1 325 36.6
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.8e-44 184.1 290 39.3
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 1.8e-44 184.1 320 37.2
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 2.4e-44 183.7 320 38.4
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 5.2e-44 182.6 345 35.1
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 5.2e-44 182.6 319 37.0
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 6.9e-44 182.2 344 35.8
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 9.0e-44 181.8 299 38.5
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 1.2e-43 181.4 324 37.3
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 1.2e-43 181.4 324 37.3
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 1.5e-43 181.0 302 38.4
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 2.6e-43 180.3 298 37.9
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 3.4e-43 179.9 298 37.2
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 3.4e-43 179.9 297 38.7
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 4.4e-43 179.5 298 36.6
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 7.6e-43 178.7 295 36.9
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 9.9e-43 178.3 298 36.6
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 1.3e-42 177.9 296 37.5
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 1.7e-42 177.6 301 37.9
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 3.8e-42 176.4 309 38.2
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 3.8e-42 176.4 298 37.2
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 3.8e-42 176.4 326 36.5
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 4.9e-42 176.0 301 38.2
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 4.9e-42 176.0 302 37.4
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 4.9e-42 176.0 300 37.0
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 6.4e-42 175.6 301 38.2
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 6.4e-42 175.6 320 38.4
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 6.4e-42 175.6 301 36.5
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 1.1e-41 174.9 297 40.7
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.1e-41 174.9 298 36.6
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 2.4e-41 173.7 290 35.5
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 2.4e-41 173.7 295 36.3
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 2.4e-41 173.7 322 36.3
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 2.4e-41 173.7 313 35.5
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 4.2e-41 172.9 301 37.9
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 5.4e-41 172.6 282 38.7
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 5.4e-41 172.6 298 36.9
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 5.4e-41 172.6 332 37.0
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 7.1e-41 172.2 347 34.6
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 9.3e-41 171.8 296 37.8
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 9.3e-41 171.8 306 37.3
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.2e-40 171.4 297 36.0
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 1.2e-40 171.4 319 36.4
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 1.6e-40 171.0 295 38.0
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 1.6e-40 171.0 314 36.9
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 1.6e-40 171.0 301 35.5
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 2.1e-40 170.6 285 38.2
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 2.1e-40 170.6 281 38.1
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 4.6e-40 169.5 332 35.5
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 6.0e-40 169.1 288 37.2
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 7.8e-40 168.7 315 35.9
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 7.8e-40 168.7 315 36.2
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 1.0e-39 168.3 316 37.0
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 1.3e-39 167.9 245 40.0
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 1.7e-39 167.5 317 36.0
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 2.3e-39 167.2 280 38.9
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 3.0e-39 166.8 298 37.6
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 3.9e-39 166.4 315 35.9
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 3.9e-39 166.4 278 37.4
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 5.1e-39 166.0 345 34.5
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 6.6e-39 165.6 296 34.8
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 8.7e-39 165.2 274 38.0
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 8.7e-39 165.2 278 37.1
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 3.3e-38 163.3 301 35.9
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 5.6e-38 162.5 314 35.4
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 7.3e-38 162.2 303 36.0
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 9.6e-38 161.8 358 33.5
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 9.6e-38 161.8 278 37.4
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 1.3e-37 161.4 339 33.0
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 2.1e-37 160.6 297 32.3
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 2.8e-37 160.2 297 34.3
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 3.6e-37 159.8 282 36.9
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 6.2e-37 159.1 239 37.2
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 8.1e-37 158.7 314 34.7
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 1.1e-36 158.3 292 36.3
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 1.4e-36 157.9 268 38.4
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 1.8e-36 157.5 353 34.0
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 3.1e-36 156.8 288 35.1
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 5.3e-36 156.0 282 34.8
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 7.6e-35 152.1 233 39.5
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 1.7e-34 151.0 250 37.2
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 8.4e-34 148.7 295 34.9
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 8.7e-31 138.7 221 37.1
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 1.9e-17 94.4 152 37.5
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 2.7e-16 90.5 113 45.1
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 3.5e-16 90.1 119 42.9
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 6.0e-16 89.4 298 27.5
Cre09.g387282 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 3.7e-13 80.1 403 25.3
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 3.1e-12 77.0 216 27.3
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 9.0e-12 75.5 154 35.1
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 4.6e-08 63.2 208 27.4
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 7.9e-08 62.4 105 33.3
SMO151G0006 Selaginella moellendorffii HOM05D006737 ORTHO05D008418 2.3e-07 60.8 133 31.6
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 2.5e-06 57.4 133 35.3


User provided reference genes

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