Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_12140 Physcomitrium patens HOM05D005569 ORTHO05D007052 8.7e-114 413.7 215 100.0
Pp3c8_16360 Physcomitrium patens HOM05D005569 ORTHO05D007052 2.3e-50 203.0 122 88.5
Mapoly0045s0143 Marchantia polymorpha HOM05D005569 ORTHO05D007052 1.5e-25 120.6 109 61.5
SEGI_33936 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 4.4e-25 119.0 108 60.2
CDE04G0659 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 1.1e-23 114.4 106 57.5
CDE07G0675 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 1.9e-23 113.6 91 63.7
Eucgr.J00350 Eucalyptus grandis HOM05D005569 ORTHO05D007052 3.5e-22 109.4 115 55.7
PSO063G3520 Papaver somniferum HOM05D005569 ORTHO05D007052 3.5e-22 109.4 137 51.1
PSO170G0292 Papaver somniferum HOM05D005569 ORTHO05D007052 3.5e-22 109.4 137 51.1
Carub.0002s2572 Capsella rubella HOM05D005569 ORTHO05D007052 7.8e-22 108.2 127 52.8
GSVIVG01029554001 Vitis vinifera HOM05D005569 ORTHO05D007052 7.8e-22 108.2 90 62.2
Aqoxy7G02714 Aquilegia oxysepala HOM05D005569 ORTHO05D007052 1.0e-21 107.8 107 57.9
Lj6P639T26 Lonicera japonica HOM05D005569 ORTHO05D007052 1.0e-21 107.8 151 48.3
Nitab4.5_0002354g0080 Nicotiana tabacum HOM05D005569 ORTHO05D007052 1.0e-21 107.8 105 55.2
Sc15g0001130 Simmondsia chinensis HOM05D005569 ORTHO05D007052 1.0e-21 107.8 107 58.9
Actinidia00647 Actinidia chinensis HOM05D005569 ORTHO05D007052 1.3e-21 107.5 149 48.3
CiPaw.02G129100 Carya illinoinensis HOM05D005569 ORTHO05D007052 1.3e-21 107.5 150 46.7
MD09G1166000 Malus domestica HOM05D005569 ORTHO05D007052 1.3e-21 107.5 107 57.0
Nitab4.5_0003757g0060 Nicotiana tabacum HOM05D005569 ORTHO05D007052 1.3e-21 107.5 115 52.2
Nn8g41003 Nelumbo nucifera HOM05D005569 ORTHO05D007052 2.3e-21 106.7 97 58.8
Ciclev10032913m.g Citrus clementina HOM05D005569 ORTHO05D007052 3.0e-21 106.3 137 50.4
TAR626G0082 Trochodendron aralioides HOM05D005569 ORTHO05D007052 3.0e-21 106.3 118 55.1
COL.COLO4_31145 Corchorus olitorius HOM05D000810 ORTHO05D003737 3.9e-21 105.9 137 49.6
Lsat_1_v5_gn_5_137201 Lactuca sativa HOM05D005569 ORTHO05D007052 3.9e-21 105.9 136 49.3
CSS0046788 Camellia sinensis var. sinensis HOM05D005569 ORTHO05D007052 5.1e-21 105.5 135 51.1
ECA234G1813 Erigeron canadensis HOM05D005569 ORTHO05D007052 5.1e-21 105.5 144 46.5
FvH4_6g36900 Fragaria vesca HOM05D005569 ORTHO05D007052 5.1e-21 105.5 107 57.0
FAN14G0087 Fragaria x ananassa HOM05D000810 ORTHO05D003737 5.1e-21 105.5 107 57.0
MD17G1161700 Malus domestica HOM05D005569 ORTHO05D007052 5.1e-21 105.5 107 56.1
Manes.06G179601 Manihot esculenta HOM05D005569 ORTHO05D007052 5.1e-21 105.5 145 48.3
Prupe.3G023400 Prunus persica HOM05D005569 ORTHO05D007052 5.1e-21 105.5 107 56.1
THA.LOC104808103 Tarenaya hassleriana HOM05D005569 ORTHO05D007052 5.1e-21 105.5 144 46.5
Thecc.06G056000 Theobroma cacao HOM05D005569 ORTHO05D007052 5.1e-21 105.5 137 48.2
CARHR072480 Cardamine hirsuta HOM05D005569 ORTHO05D007052 6.6e-21 105.1 127 52.0
Cpa.g.sc176.7 Carica papaya HOM05D005569 ORTHO05D007052 6.6e-21 105.1 107 55.1
Potri.008G004200 Populus trichocarpa HOM05D005569 ORTHO05D007052 6.6e-21 105.1 107 54.2
TWI75G0478 Tripterygium wilfordii HOM05D005569 ORTHO05D007052 6.6e-21 105.1 107 55.1
Gohir.A05G114900 Gossypium hirsutum HOM05D005569 ORTHO05D007052 8.7e-21 104.8 137 49.6
Gohir.D05G115300 Gossypium hirsutum HOM05D005569 ORTHO05D007052 8.7e-21 104.8 137 49.6
Gorai.009G119400 Gossypium raimondii HOM05D005569 ORTHO05D007052 8.7e-21 104.8 137 49.6
Hma1.2p1_1111F.1_g258450 Hydrangea macrophylla HOM05D005569 ORTHO05D007052 1.1e-20 104.4 152 46.1
Hund05672 Selenicereus undatus HOM05D005569 ORTHO05D007052 1.1e-20 104.4 88 63.6
EL10Ac7g18137 Beta vulgaris HOM05D005569 ORTHO05D007052 1.5e-20 104.0 85 64.7
AUR62025672 Chenopodium quinoa HOM05D005569 ORTHO05D007052 1.5e-20 104.0 88 63.6
FAN02G3798 Fragaria x ananassa HOM05D005569 ORTHO05D007052 1.5e-20 104.0 98 58.2
SMO215G0002 Selaginella moellendorffii HOM05D005569 ORTHO05D007052 1.5e-20 104.0 86 64.0
AL2G39310 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 1.9e-20 103.6 127 52.0
HanXRQChr12g0359721 Helianthus annuus HOM05D005569 ORTHO05D007052 1.9e-20 103.6 132 48.5
AT1G78895 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 2.5e-20 103.2 127 52.0
Oeu049628.2 Olea europaea HOM05D005569 ORTHO05D007052 2.5e-20 103.2 86 66.3
QL05p088862 Quercus lobata HOM05D005569 ORTHO05D007052 2.5e-20 103.2 107 55.1
RcHm_v2.0_Chr2g0149331 Rosa chinensis HOM05D005569 ORTHO05D007052 2.5e-20 103.2 107 55.1
CiPaw.01G208600 Carya illinoinensis HOM05D005569 ORTHO05D007052 3.3e-20 102.8 137 47.4
FAN09G0120 Fragaria x ananassa HOM05D005569 ORTHO05D007052 3.3e-20 102.8 88 62.5
Lj3g0021821 Lotus japonicus HOM05D005569 ORTHO05D007052 3.3e-20 102.8 107 56.1
BcaB02g07184 Brassica carinata HOM05D005569 ORTHO05D007052 4.3e-20 102.4 127 49.6
HanXRQChr10g0311221 Helianthus annuus HOM05D005569 ORTHO05D007052 4.3e-20 102.4 134 48.5
HPP92_023863 Vanilla planifolia HOM05D005569 ORTHO05D007052 4.3e-20 102.4 118 53.4
AUR62001332 Chenopodium quinoa HOM05D005569 ORTHO05D007052 5.6e-20 102.1 98 59.2
ClCG09G020780 Citrullus lanatus HOM05D005569 ORTHO05D007052 5.6e-20 102.1 137 48.9
VMungo0331G1663 Vigna mungo HOM05D005569 ORTHO05D007052 5.6e-20 102.1 118 55.1
Lalb_Chr01g0011651 Lupinus albus HOM05D005569 ORTHO05D007052 7.3e-20 101.7 136 47.8
Sed0017383 Sechium edule HOM05D005569 ORTHO05D007052 7.3e-20 101.7 107 54.2
Actinidia31124 Actinidia chinensis HOM05D005569 ORTHO05D007052 9.6e-20 101.3 105 56.2
arahy.Tifrunner.gnm1.ann1.DT0EHL Arachis hypogaea HOM05D005569 ORTHO05D007052 9.6e-20 101.3 137 48.9
Sp5g33910 Schrenkiella parvula HOM05D005569 ORTHO05D007052 9.6e-20 101.3 127 48.8
CARHR017290 Cardamine hirsuta HOM05D005569 ORTHO05D007052 1.3e-19 100.9 88 61.4
MELO3C002923.2 Cucumis melo HOM05D005569 ORTHO05D007052 1.3e-19 100.9 107 54.2
Psat7g265160 Pisum sativum HOM05D005569 ORTHO05D007052 1.3e-19 100.9 107 55.1
Sp1g14960 Schrenkiella parvula HOM05D005569 ORTHO05D007052 1.3e-19 100.9 88 60.2
Sopen06g022820 Solanum pennellii HOM05D005569 ORTHO05D007052 1.3e-19 100.9 135 46.7
vmacro12582 Vaccinium macrocarpon HOM05D005569 ORTHO05D007052 1.3e-19 100.9 105 56.2
arahy.Tifrunner.gnm1.ann1.0XD544 Arachis hypogaea HOM05D005569 ORTHO05D007052 1.6e-19 100.5 137 48.9
BcaC07g41383 Brassica carinata HOM05D005569 ORTHO05D007052 1.6e-19 100.5 97 56.7
CsaV3_5G025600 Cucumis sativus L. HOM05D005569 ORTHO05D007052 1.6e-19 100.5 107 53.3
Nitab4.5_0001708g0020 Nicotiana tabacum HOM05D005569 ORTHO05D007052 1.6e-19 100.5 132 48.5
Os08g0225100 Oryza sativa ssp. japonica HOM05D005569 ORTHO05D007052 1.6e-19 100.5 90 58.9
TPR.G38774 Trifolium pratense HOM05D005569 ORTHO05D007052 1.6e-19 100.5 157 42.0
Nitab4.5_0007226g0010 Nicotiana tabacum HOM05D005569 ORTHO05D007052 2.1e-19 100.1 102 54.9
Peaxi162Scf00084g00024 Petunia axillaris HOM05D005569 ORTHO05D007052 2.1e-19 100.1 102 54.9
PGSC0003DMG400026509 Solanum tuberosum HOM05D005569 ORTHO05D007052 2.1e-19 100.1 135 46.7
Zm00001eb414080 Zea mays HOM05D005569 ORTHO05D007052 2.1e-19 100.1 90 60.0
Ca_20982_v3 Cicer arietinum L. HOM05D005569 ORTHO05D007052 2.8e-19 99.8 88 61.4
Thhalv10019242m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 2.8e-19 99.8 97 55.7
AL1G28990 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 3.6e-19 99.4 88 60.2
CAN.G1445.2 Capsicum annuum HOM05D005569 ORTHO05D007052 3.6e-19 99.4 118 50.8
AT1G16825 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 4.8e-19 99.0 88 60.2
MSTRG.9559 Avicennia marina HOM05D005569 ORTHO05D007052 4.8e-19 99.0 120 50.0
Sopen08g026060 Solanum pennellii HOM05D005569 ORTHO05D007052 4.8e-19 99.0 132 49.2
Glyma.07G001900 Glycine max HOM05D005569 ORTHO05D007052 6.2e-19 98.6 160 43.1
PGSC0003DMG400001840 Solanum tuberosum HOM05D005569 ORTHO05D007052 6.2e-19 98.6 132 48.5
Carub.0001s1656 Capsella rubella HOM05D005569 ORTHO05D007052 8.1e-19 98.2 88 59.1
Migut.D00888 Erythranthe guttata HOM05D005569 ORTHO05D007052 1.1e-18 97.8 121 47.9
Medtr4g005340 Medicago truncatula HOM05D005569 ORTHO05D007052 1.1e-18 97.8 88 60.2
SalBow4G0561 Salvia bowleyana HOM05D005569 ORTHO05D007052 1.1e-18 97.8 96 55.2
Solyc08g077470.4 Solanum lycopersicum HOM05D005569 ORTHO05D007052 1.1e-18 97.8 132 48.5
BraA07t30385Z Brassica rapa HOM05D005569 ORTHO05D007052 1.4e-18 97.4 148 46.6
Hund18590 Selenicereus undatus HOM05D005569 ORTHO05D007052 1.4e-18 97.4 88 60.2
ATR0626G016 Amborella trichopoda HOM05D005569 ORTHO05D007052 2.4e-18 96.7 108 52.8
Aa31LG4G2110 Aethionema arabicum HOM05D005569 ORTHO05D007052 3.1e-18 96.3 127 49.6
MSTRG.4523 Avicennia marina HOM05D005569 ORTHO05D007052 3.1e-18 96.3 133 46.6
SGA_v2.0_scaffold4G02105 Striga asiatica HOM05D005569 ORTHO05D007052 3.1e-18 96.3 91 58.2
C08p44280 Brassica napus HOM05D005569 ORTHO05D007052 4.0e-18 95.9 88 60.2
BcaC07g41456 Brassica carinata HOM05D005569 ORTHO05D007052 6.9e-18 95.1 100 55.0
A09p60680 Brassica napus HOM05D005569 ORTHO05D007052 6.9e-18 95.1 88 60.2
BolC8t51973H Brassica oleracea HOM05D005569 ORTHO05D007052 6.9e-18 95.1 100 55.0
SEGI_27689 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 9.0e-18 94.7 85 60.0
A07p27440 Brassica napus HOM05D005569 ORTHO05D007052 1.2e-17 94.4 142 47.2
BraA09t41445Z Brassica rapa HOM05D005569 ORTHO05D007052 1.2e-17 94.4 100 55.0
BolC6t38199H Brassica oleracea HOM05D005569 ORTHO05D007052 1.5e-17 94.0 88 60.2
BcaC08g45404 Brassica carinata HOM05D005569 ORTHO05D007052 2.0e-17 93.6 98 56.1
C06p30360 Brassica napus HOM05D005569 ORTHO05D007052 2.0e-17 93.6 98 56.1
Phvul.010G164400 Phaseolus vulgaris HOM05D005569 ORTHO05D007052 4.5e-17 92.4 90 58.9
CBR_g40779 Chara braunii HOM05D005569 ORTHO05D007052 1.3e-16 90.9 94 52.1
CAN.G308.17 Capsicum annuum HOM05D005569 ORTHO05D007052 1.7e-16 90.5 88 53.4
PGR031G1139 Punica granatum HOM05D005569 ORTHO05D007052 2.2e-16 90.1 121 48.8
FAN05G2575 Fragaria x ananassa HOM05D005569 ORTHO05D007052 3.8e-16 89.4 136 44.1
CBR_g41646 Chara braunii HOM05D000785 ORTHO05D000231 2.4e-15 86.7 79 54.4
Cc04_g00060 Coffea canephora HOM05D005569 ORTHO05D007052 1.2e-14 84.3 89 55.1
Duzib192G1047 Durio zibethinus HOM05D005569 ORTHO05D007052 1.0e-13 81.3 89 52.8
CANSAT01G2461 Cannabis sativa HOM05D005569 ORTHO05D007052 2.3e-13 80.1 108 47.2
MBI16_g18210_MAGBIO Magnolia biondii HOM05D005569 ORTHO05D007052 2.3e-13 80.1 93 52.7
Haze_16187 Corylus avellana HOM05D005569 ORTHO05D007052 5.1e-13 79.0 93 52.7
Prupe.3G058300 Prunus persica HOM05D005569 ORTHO05D007052 6.7e-13 78.6 67 61.2
DCAR_028944 Daucus carota HOM05D005569 ORTHO05D007052 1.5e-12 77.4 72 58.3
Thhalv10009539m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 4.3e-12 75.9 63 61.9
CBR_g49429 Chara braunii HOM05D005569 ORTHO05D007052 9.6e-12 74.7 83 45.8
Sabra08G0001800 Salix brachista HOM05D005569 ORTHO05D007052 2.1e-11 73.6 65 60.0
SEGI_34083 Sequoiadendron giganteum HOM05D000074 ORTHO05D000220 2.4e-07 60.1 48 68.8


User provided reference genes

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