Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 1.3e-88 329.7 163 100.0
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 8.9e-18 94.4 92 45.7
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 2.6e-17 92.8 117 47.0
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 4.4e-17 92.0 93 44.1
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 7.5e-17 91.3 88 51.1
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 9.8e-17 90.9 58 65.5
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 1.7e-16 90.1 75 53.3
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 1.7e-16 90.1 81 46.9
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 2.2e-16 89.7 79 53.2
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 2.2e-16 89.7 116 41.4
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.9e-16 89.4 75 53.3
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 2.9e-16 89.4 55 67.3
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 2.9e-16 89.4 75 54.7
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 3.7e-16 89.0 60 63.3
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 3.7e-16 89.0 79 49.4
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 3.7e-16 89.0 77 53.2
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 3.7e-16 89.0 55 67.3
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 3.7e-16 89.0 83 51.8
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 3.7e-16 89.0 62 62.9
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 6.4e-16 88.2 69 56.5
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 6.4e-16 88.2 60 61.7
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 6.4e-16 88.2 103 43.7
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 8.3e-16 87.8 58 63.8
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 8.3e-16 87.8 67 56.7
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 8.3e-16 87.8 78 52.6
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 8.3e-16 87.8 77 53.2
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 1.1e-15 87.4 107 43.0
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 1.1e-15 87.4 72 51.4
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 1.1e-15 87.4 75 54.7
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 1.4e-15 87.0 68 54.4
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 1.4e-15 87.0 58 62.1
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 1.4e-15 87.0 84 51.2
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.9e-15 86.7 59 62.7
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.9e-15 86.7 59 62.7
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 1.9e-15 86.7 59 62.7
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 1.9e-15 86.7 55 70.9
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 1.9e-15 86.7 55 63.6
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 1.9e-15 86.7 60 58.3
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 1.9e-15 86.7 84 52.4
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 1.9e-15 86.7 83 48.2
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 1.9e-15 86.7 83 48.2
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 1.9e-15 86.7 83 48.2
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 2.4e-15 86.3 111 47.7
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 2.4e-15 86.3 60 56.7
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 2.4e-15 86.3 95 42.1
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 2.4e-15 86.3 68 57.4
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 3.2e-15 85.9 77 50.6
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 3.2e-15 85.9 55 63.6
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 3.2e-15 85.9 55 65.5
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 3.2e-15 85.9 92 46.7
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 4.1e-15 85.5 68 57.4
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 4.1e-15 85.5 109 40.4
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 4.1e-15 85.5 94 43.6
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 4.1e-15 85.5 69 55.1
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 4.1e-15 85.5 55 61.8
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 4.1e-15 85.5 55 61.8
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 4.1e-15 85.5 55 65.5
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 5.4e-15 85.1 82 48.8
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 5.4e-15 85.1 55 61.8
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 5.4e-15 85.1 83 51.8
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 5.4e-15 85.1 55 61.8
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 5.4e-15 85.1 85 48.2
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 7.0e-15 84.7 83 45.8
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 9.2e-15 84.3 67 52.2
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 9.2e-15 84.3 83 50.6
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 9.2e-15 84.3 55 61.8
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 1.2e-14 84.0 68 52.9
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 1.2e-14 84.0 95 43.2
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 1.2e-14 84.0 70 51.4
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 1.2e-14 84.0 55 61.8
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.2e-14 84.0 91 46.2
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 1.2e-14 84.0 55 63.6
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 1.6e-14 83.6 65 56.9
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 1.6e-14 83.6 52 67.3
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 1.6e-14 83.6 99 45.5
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 1.6e-14 83.6 55 63.6
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 1.6e-14 83.6 68 54.4
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 1.6e-14 83.6 90 44.4
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.0e-14 83.2 55 65.5
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 2.0e-14 83.2 60 55.0
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 2.0e-14 83.2 55 63.6
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 2.7e-14 82.8 105 41.9
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.7e-14 82.8 55 65.5
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 3.5e-14 82.4 109 41.3
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 3.5e-14 82.4 55 61.8
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 3.5e-14 82.4 55 61.8
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 4.6e-14 82.0 76 47.4
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 4.6e-14 82.0 94 47.9
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 6.0e-14 81.6 92 47.8
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 6.0e-14 81.6 58 60.3
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 1.0e-13 80.9 91 45.1
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.3e-13 80.5 85 47.1
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 1.7e-13 80.1 79 48.1
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 1.7e-13 80.1 79 48.1
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 2.3e-13 79.7 95 44.2
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.9e-12 76.6 47 68.1
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 2.5e-12 76.3 95 42.1
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 4.3e-12 75.5 52 63.5
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 7.3e-12 74.7 93 43.0
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 9.5e-12 74.3 98 39.8
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 1.2e-11 73.9 78 47.4
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 1.1e-07 60.8 66 48.5
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.1e-07 60.8 57 45.6


User provided reference genes

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