Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c23_6870 Physcomitrium patens HOM05D005866 ORTHO05D007078 3.3e-173 611.7 327 100.0
Pp3c20_9600 Physcomitrium patens HOM05D005866 ORTHO05D007078 4.9e-116 421.8 324 72.5
Mapoly0010s0127 Marchantia polymorpha HOM05D005866 ORTHO05D007078 2.5e-64 250.0 234 62.0
SEGI_22580 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 2.9e-44 183.3 316 38.6
Mapoly0004s0086 Marchantia polymorpha HOM05D005866 ORTHO05D007078 3.6e-26 123.2 228 37.3
AagrBONN_evm.TU.Sc2ySwM_117.2545 Anthoceros agrestis HOM05D005866 ORTHO05D007078 4.7e-26 122.9 220 38.2
Pp3c5_19930 Physcomitrium patens HOM05D005866 ORTHO05D007078 4.1e-22 109.8 250 34.0
SMO143G0029 Selaginella moellendorffii HOM05D001879 ORTHO05D007648 3.6e-18 96.7 213 30.5
FAN14G3518 Fragaria x ananassa HOM05D005866 ORTHO05D007078 4.1e-14 83.2 215 31.6
BraA01t04319Z Brassica rapa HOM05D005866 ORTHO05D007078 7.0e-14 82.4 213 29.1
SEGI_33363 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 7.0e-14 82.4 229 29.7
Potri.006G096700 Populus trichocarpa HOM05D005866 ORTHO05D007078 1.0e-12 78.6 226 27.4
FAN09G2814 Fragaria x ananassa HOM05D000012 ORTHO05D007078 1.3e-12 78.2 217 28.6
arahy.Tifrunner.gnm1.ann1.Q1H550 Arachis hypogaea HOM05D005866 ORTHO05D007078 2.3e-12 77.4 128 28.9
Psat3g131120 Pisum sativum HOM05D005866 ORTHO05D007078 2.3e-12 77.4 201 26.9
SEGI_17473 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 2.3e-12 77.4 193 29.0
CsaV3_4G026010 Cucumis sativus L. HOM05D005866 ORTHO05D007078 2.9e-12 77.0 215 27.4
Gohir.D01G215200 Gossypium hirsutum HOM05D005866 ORTHO05D007078 2.9e-12 77.0 212 27.8
Aa31LG3G1580 Aethionema arabicum HOM05D005866 ORTHO05D007078 5.0e-12 76.3 215 27.4
Ca_07614_v3 Cicer arietinum L. HOM05D005866 ORTHO05D007078 1.1e-11 75.1 220 25.0
Lj3g0009346 Lotus japonicus HOM05D005866 ORTHO05D007078 1.1e-11 75.1 198 29.8
CiPaw.09G206400 Carya illinoinensis HOM05D005866 ORTHO05D007078 1.5e-11 74.7 244 27.5
Glyma.07G145800 Glycine max HOM05D005866 ORTHO05D007078 2.5e-11 73.9 197 29.4
arahy.Tifrunner.gnm1.ann1.LP8IIZ Arachis hypogaea HOM05D005866 ORTHO05D007078 3.3e-11 73.6 211 25.1
MD04G1147400 Malus domestica HOM05D005866 ORTHO05D007078 3.3e-11 73.6 239 24.7
arahy.Tifrunner.gnm1.ann1.6JA19R Arachis hypogaea HOM05D005866 ORTHO05D007078 4.2e-11 73.2 128 27.3
TPR.G1580 Trifolium pratense HOM05D005866 ORTHO05D007078 4.2e-11 73.2 201 27.4
Lj1g0011685 Lotus japonicus HOM05D005866 ORTHO05D007078 7.2e-11 72.4 204 27.0
Glyma.18G197300 Glycine max HOM05D005866 ORTHO05D007078 9.5e-11 72.0 197 29.9
Aqoxy1G00701 Aquilegia oxysepala HOM05D005866 ORTHO05D007078 1.6e-10 71.2 214 26.2
Psat7g247600 Pisum sativum HOM05D005866 ORTHO05D007078 2.1e-10 70.9 232 28.9
MELO3C003227.2 Cucumis melo HOM05D005866 ORTHO05D007078 3.6e-10 70.1 215 27.0
FAN02G1355 Fragaria x ananassa HOM05D005866 ORTHO05D007078 4.7e-10 69.7 214 28.0
Phvul.008G107300 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 6.1e-10 69.3 214 28.0
AUR62042946 Chenopodium quinoa HOM05D005866 ORTHO05D007078 8.0e-10 68.9 196 25.5
ClCG04G007220 Citrullus lanatus HOM05D005866 ORTHO05D007078 8.0e-10 68.9 215 27.0
ECA247G0127 Erigeron canadensis HOM05D005866 ORTHO05D007078 8.0e-10 68.9 221 26.2
FvH4_6g11980 Fragaria vesca HOM05D005866 ORTHO05D007078 8.0e-10 68.9 214 28.5
FAN14G3397 Fragaria x ananassa HOM05D000012 ORTHO05D000567 8.0e-10 68.9 214 28.5
AUR62025814 Chenopodium quinoa HOM05D005866 ORTHO05D007078 2.3e-09 67.4 194 23.7
Lj2C80T14 Lonicera japonica HOM05D005866 ORTHO05D007078 3.0e-09 67.0 199 28.6
ECA247G1841 Erigeron canadensis HOM05D005866 ORTHO05D007078 6.8e-09 65.9 111 27.0
BcaC09g48050 Brassica carinata HOM05D005866 ORTHO05D007078 2.6e-08 63.9 213 27.7
Medtr7g067000 Medicago truncatula HOM05D005866 ORTHO05D007078 2.6e-08 63.9 215 24.7
Lalb_Chr07g0193301 Lupinus albus HOM05D005866 ORTHO05D007078 3.4e-08 63.5 194 28.9
CDE03G0505 Ceratophyllum demersum HOM05D005866 ORTHO05D007078 4.4e-08 63.2 212 24.1
Thhalv10021354m.g Eutrema salsugineum HOM05D005866 ORTHO05D007078 5.7e-08 62.8 213 26.8
Sp3g07500 Schrenkiella parvula HOM05D005866 ORTHO05D007078 5.7e-08 62.8 203 27.1
Sed0005881 Sechium edule HOM05D005866 ORTHO05D007078 7.5e-08 62.4 212 26.4
AL3G20110 Arabidopsis lyrata HOM05D005866 ORTHO05D007078 1.3e-07 61.6 206 25.2
AT3G09050 Arabidopsis thaliana HOM05D005866 ORTHO05D007078 1.7e-07 61.2 212 24.5
arahy.Tifrunner.gnm1.ann1.F83RTD Arachis hypogaea HOM05D005866 ORTHO05D007078 1.7e-07 61.2 230 19.6
arahy.Tifrunner.gnm1.ann1.T33YJ3 Arachis hypogaea HOM05D005866 ORTHO05D007078 1.7e-07 61.2 232 20.7
Dinv35509 Davidia involucrata HOM05D005866 ORTHO05D007078 2.2e-07 60.8 240 24.6
ATR0618G115 Amborella trichopoda HOM05D005866 ORTHO05D007078 2.9e-07 60.5 96 32.3
Dinv14530 Davidia involucrata HOM05D005866 ORTHO05D007078 2.9e-07 60.5 240 24.6
Prupe.6G271100 Prunus persica HOM05D000012 ORTHO05D000567 3.7e-07 60.1 212 23.6
BolC1t05477H Brassica oleracea HOM05D005866 ORTHO05D007078 4.9e-07 59.7 203 26.6
CSS0007949 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 4.9e-07 59.7 195 24.6
CSS0025068 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 4.9e-07 59.7 195 24.6
Hund02698 Selenicereus undatus HOM05D005866 ORTHO05D007078 6.4e-07 59.3 250 23.2
VMungo1383G0141 Vigna mungo HOM05D005866 ORTHO05D007078 6.4e-07 59.3 211 23.2
BcaC09g48006 Brassica carinata HOM05D005866 ORTHO05D007078 1.1e-06 58.5 213 25.8
Carub.0003s0821 Capsella rubella HOM05D005866 ORTHO05D007078 1.1e-06 58.5 205 26.8
Os01g0853000 Oryza sativa ssp. japonica HOM05D005866 ORTHO05D007078 1.1e-06 58.5 219 23.7
A05p39790 Brassica napus HOM05D005866 ORTHO05D007078 1.4e-06 58.2 205 26.8
C05p58830 Brassica napus HOM05D005866 ORTHO05D007078 1.4e-06 58.2 205 26.3
BolC5t34535H Brassica oleracea HOM05D005866 ORTHO05D007078 1.4e-06 58.2 205 26.3
BraA05t22763Z Brassica rapa HOM05D005866 ORTHO05D007078 1.4e-06 58.2 205 26.8
FAN05G0379 Fragaria x ananassa HOM05D000012 ORTHO05D000567 1.4e-06 58.2 214 27.1
Phvul.010G008600 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 1.4e-06 58.2 227 26.0
TWI74G1551 Tripterygium wilfordii HOM05D005866 ORTHO05D007078 1.4e-06 58.2 211 26.1
Zm00001eb367320 Zea mays HOM05D005866 ORTHO05D007078 1.4e-06 58.2 198 23.2
BcaC09g48005 Brassica carinata HOM05D005866 ORTHO05D007078 1.8e-06 57.8 213 25.4
vmacro08602 Vaccinium macrocarpon HOM05D005866 ORTHO05D007078 2.4e-06 57.4 227 24.2
BcaC05g29639 Brassica carinata HOM05D005866 ORTHO05D007078 4.1e-06 56.6 205 25.4
CARHR083410 Cardamine hirsuta HOM05D005866 ORTHO05D007078 5.4e-06 56.2 212 27.4


User provided reference genes

Program Settings