Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 0.0e+00 2403.2 1220 100.0
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 2.7e-308 1062.4 1256 49.5
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 5.3e-248 862.1 1225 42.4
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 8.2e-233 811.6 1236 40.1
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 7.6e-231 805.1 1225 40.6
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 1.5e-226 790.8 1231 39.9
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 6.3e-225 785.4 1221 39.3
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 5.5e-221 772.3 1230 38.9
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 1.9e-218 763.8 1225 37.9
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 2.0e-215 753.8 1231 37.7
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 3.6e-212 743.0 1240 38.0
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 1.4e-211 741.1 1239 37.3
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 1.8e-211 740.7 1239 38.0
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 2.3e-211 740.3 1233 38.1
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 3.0e-211 740.0 1235 38.0
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 1.5e-210 737.6 1237 38.3
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 2.8e-209 733.4 1243 38.1
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 1.3e-206 724.5 1235 38.4
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 1.3e-206 724.5 1223 38.0
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 1.3e-206 724.5 1239 37.4
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 3.8e-206 723.0 1224 37.7
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 6.5e-206 722.2 1231 37.2
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 8.5e-206 721.8 1239 37.5
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 8.5e-206 721.8 1223 37.9
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 5.5e-205 719.2 1220 38.1
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 1.2e-204 718.0 1233 36.7
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.2e-204 718.0 1224 38.1
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 2.3e-203 713.8 1225 38.2
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 3.9e-203 713.0 1223 37.9
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 5.2e-203 712.6 1236 37.6
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 5.2e-203 712.6 1223 37.7
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 2.6e-202 710.3 1242 37.3
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 5.7e-202 709.1 1223 37.8
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 9.7e-202 708.4 1231 38.3
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.3e-201 708.0 1223 37.6
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 2.2e-201 707.2 1243 37.5
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 2.4e-200 703.7 1233 36.9
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 4.1e-200 703.0 1230 37.2
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 1.2e-199 701.4 1227 37.7
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 2.6e-199 700.3 1236 36.2
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 4.5e-199 699.5 1230 36.6
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 1.0e-198 698.4 1236 36.1
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 1.0e-198 698.4 1181 37.3
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 1.0e-198 698.4 1234 37.1
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 1.3e-198 698.0 1233 37.1
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 1.7e-198 697.6 1229 36.5
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 6.5e-198 695.7 1227 36.8
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 1.9e-197 694.1 1232 36.7
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 7.2e-197 692.2 1237 36.2
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 1.2e-196 691.4 1219 36.3
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 1.6e-196 691.0 1228 36.3
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 2.1e-196 690.6 1229 37.3
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 6.1e-196 689.1 1217 36.9
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 1.0e-195 688.3 1218 36.8
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 1.0e-195 688.3 1235 36.9
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 1.8e-195 687.6 1233 36.5
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 3.0e-195 686.8 1232 36.1
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 5.2e-195 686.0 1223 36.7
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 8.8e-195 685.3 1225 36.8
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 8.8e-195 685.3 1225 36.8
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 1.2e-194 684.9 1266 36.4
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 1.5e-194 684.5 1236 35.7
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 2.6e-194 683.7 1229 36.5
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 2.6e-194 683.7 1237 36.3
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 9.7e-194 681.8 1234 37.0
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 1.3e-193 681.4 1228 36.2
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 3.7e-193 679.9 1232 36.2
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 6.3e-193 679.1 1229 37.0
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 3.1e-192 676.8 1225 35.8
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 7.0e-192 675.6 1231 36.7
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 1.7e-190 671.0 1232 36.6
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 8.5e-190 668.7 1231 36.1
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 2.5e-189 667.2 1233 36.4
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 3.2e-189 666.8 1230 36.1
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 5.5e-189 666.0 1224 36.7
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 1.0e-187 661.8 1182 36.8
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 1.4e-187 661.4 1234 35.6
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 5.2e-187 659.4 1234 36.2
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 8.8e-187 658.7 1234 36.0
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 4.4e-186 656.4 1232 36.0
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 4.8e-185 652.9 1196 36.5
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 1.8e-184 651.0 1235 35.5
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 1.8e-184 651.0 1237 35.3
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 7.7e-183 645.6 1230 35.0
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 8.6e-182 642.1 1222 35.6
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 2.8e-180 637.1 1240 35.6
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 4.7e-180 636.3 1121 37.2
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 1.0e-179 635.2 1125 37.6
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 5.9e-175 619.4 1244 35.0
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 2.9e-174 617.1 1242 34.7
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 4.0e-171 606.7 1231 35.3
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 9.2e-168 595.5 1199 34.5
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 2.7e-159 567.4 1220 31.2
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 5.6e-157 559.7 1221 33.3
Os02g0829400 Oryza sativa ssp. japonica HOM05D004911 ORTHO05D005930 1.3e-153 548.5 1234 32.7
TPR.G32325 Trifolium pratense HOM05D004911 ORTHO05D005930 1.2e-140 505.4 979 35.8
Eucgr.J00848 Eucalyptus grandis HOM05D004911 ORTHO05D005930 9.0e-131 472.6 857 35.2
QL03p043438 Quercus lobata HOM05D004911 ORTHO05D005930 2.1e-119 434.9 722 37.8
CiPaw.05G166600 Carya illinoinensis HOM05D004911 ORTHO05D005930 1.0e-118 432.6 728 38.2
AagrBONN_evm.TU.Sc2ySwM_228.3553 Anthoceros agrestis HOM05D004911 ORTHO05D005930 6.2e-116 423.3 523 44.9
CBR_g20270 Chara braunii HOM05D004911 ORTHO05D005930 2.9e-113 414.5 1623 27.2
AUR62017660 Chenopodium quinoa HOM05D004911 ORTHO05D005930 8.4e-113 412.9 722 36.6
Haze_11729 Corylus avellana HOM05D004911 ORTHO05D005930 5.5e-112 410.2 626 38.3
Hma1.2p1_0183F.1_g081060 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 1.8e-110 405.2 717 36.8
Oeu056145.2 Olea europaea HOM05D004911 ORTHO05D005930 2.6e-106 391.3 717 35.8
HPP92_012853 Vanilla planifolia HOM05D004911 ORTHO05D005930 1.0e-102 379.4 801 34.1
TAR371G0490 Trochodendron aralioides HOM05D004911 ORTHO05D005930 4.3e-101 374.0 530 40.6
Zm00001eb259390 Zea mays HOM05D004911 ORTHO05D005930 3.2e-96 357.8 720 34.0
TAR371G0035 Trochodendron aralioides HOM05D004911 ORTHO05D005930 3.9e-94 350.9 637 36.6
Phvul.002G058701 Phaseolus vulgaris HOM05D004911 ORTHO05D005930 9.1e-91 339.7 633 36.8
CiPaw.05G166500 Carya illinoinensis HOM05D004911 ORTHO05D005930 4.1e-83 314.3 504 36.3
QL03p043434 Quercus lobata HOM05D004911 ORTHO05D005930 1.2e-82 312.8 493 40.0
AagrBONN_evm.TU.Sc2ySwM_228.3554 Anthoceros agrestis HOM05D004911 ORTHO05D005930 1.4e-78 299.3 617 34.2
Haze_11728 Corylus avellana HOM05D004911 ORTHO05D005930 1.2e-61 243.0 503 34.2
HPP92_012845 Vanilla planifolia HOM05D004911 ORTHO05D005930 6.8e-46 190.7 268 40.3
HPP92_012844 Vanilla planifolia HOM05D004911 ORTHO05D005930 2.5e-40 172.2 672 28.6
SHI38855 Sapria himalayana HOM05D004911 ORTHO05D005930 4.4e-29 134.8 436 29.4
SHI53748 Sapria himalayana HOM05D004911 ORTHO05D005930 3.8e-28 131.7 252 36.1
SEGI_29886 Sequoiadendron giganteum HOM05D004911 ORTHO05D005930 9.3e-27 127.1 140 45.7
SHI50333 Sapria himalayana HOM05D004911 ORTHO05D005930 7.8e-26 124.0 254 35.4
SHI34912 Sapria himalayana HOM05D004911 ORTHO05D005930 5.6e-24 117.9 632 22.9
SHI47273 Sapria himalayana HOM05D004911 ORTHO05D005930 9.6e-24 117.1 506 23.5
SHI34911 Sapria himalayana HOM05D004911 ORTHO05D005930 5.4e-19 101.3 170 36.5
SHI39007 Sapria himalayana HOM05D004911 ORTHO05D005930 5.4e-19 101.3 367 27.8
ATR0624G005 Amborella trichopoda HOM05D004911 ORTHO05D005930 1.6e-18 99.8 121 39.7
SHI42568 Sapria himalayana HOM05D004911 ORTHO05D005930 2.7e-18 99.0 180 36.1
SHI39005 Sapria himalayana HOM05D004911 ORTHO05D005930 5.1e-17 94.7 169 34.9
SHI49274 Sapria himalayana HOM05D004911 ORTHO05D005930 8.7e-17 94.0 259 28.2
SHI45395 Sapria himalayana HOM05D004911 ORTHO05D005930 1.9e-16 92.8 147 38.1
SHI45716 Sapria himalayana HOM05D004911 ORTHO05D005930 1.9e-16 92.8 147 38.1
SHI39004 Sapria himalayana HOM05D004911 ORTHO05D005930 3.6e-15 88.6 216 34.3
SHI42567 Sapria himalayana HOM05D004911 ORTHO05D005930 4.8e-15 88.2 162 37.0
SHI51106 Sapria himalayana HOM05D004911 ORTHO05D005930 1.8e-14 86.3 110 41.8
SHI38854 Sapria himalayana HOM05D004911 ORTHO05D005930 9.9e-13 80.5 118 40.7
SHI50603 Sapria himalayana HOM05D004911 ORTHO05D005930 3.2e-11 75.5 244 27.5
SHI45051 Sapria himalayana HOM05D004911 ORTHO05D005930 1.6e-10 73.2 51 62.7
SHI45052 Sapria himalayana HOM05D004911 ORTHO05D005930 2.5e-08 65.9 153 28.8
Dinv29855 Davidia involucrata HOM05D004911 ORTHO05D005930 3.3e-08 65.5 53 54.7
VMungo0251G2567 Vigna mungo HOM05D004911 ORTHO05D018492 5.6e-08 64.7 78 43.6
SMO343G0003 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 1.6e-07 63.2 92 39.1


User provided reference genes

Program Settings