Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c23_2250 Physcomitrium patens HOM05D018276 ORTHO05D030469 0.0e+00 2599.3 1315 100.0
Pp3c23_2252 Physcomitrium patens HOM05D018276 ORTHO05D030469 0.0e+00 2438.3 1315 95.2
Pp3c20_14620 Physcomitrium patens HOM05D018276 ORTHO05D030469 6.6e-297 1024.6 1299 49.0
Pp3c8_16110 Physcomitrium patens HOM05D018276 ORTHO05D030469 3.5e-229 799.7 1303 42.7
Pp3c5_12510 Physcomitrium patens HOM05D018276 ORTHO05D001148 6.4e-34 151.0 1363 24.7
Pp3c25_2350 Physcomitrium patens HOM05D018276 ORTHO05D001148 2.9e-18 99.0 308 30.5
Pp3c2_13420 Physcomitrium patens HOM05D002110 ORTHO05D001148 3.8e-18 98.6 341 27.6
SEGI_10040 Sequoiadendron giganteum HOM05D002110 ORTHO05D001148 2.0e-14 86.3 1308 20.9
Mapoly0047s0129 Marchantia polymorpha HOM05D004610 ORTHO05D001148 3.1e-12 79.0 1422 21.1
Pp3c17_11090 Physcomitrium patens HOM05D018276 ORTHO05D001148 3.1e-12 79.0 1314 22.3
ATR1125G050 Amborella trichopoda HOM05D004610 ORTHO05D001148 5.9e-11 74.7 310 22.9
CSS0026202 Camellia sinensis var. sinensis HOM05D002110 ORTHO05D001148 5.9e-11 74.7 312 26.3
SGA_v2.0_scaffold107G30799 Striga asiatica HOM05D002110 ORTHO05D001148 1.3e-10 73.6 317 23.7
AUR62035064 Chenopodium quinoa HOM05D002110 ORTHO05D001148 1.7e-10 73.2 301 24.6
AUR62042948 Chenopodium quinoa HOM05D002110 ORTHO05D001148 1.7e-10 73.2 301 24.6
Haze_01085 Corylus avellana HOM05D002110 ORTHO05D001148 1.7e-10 73.2 334 22.8
CANSAT54G2967 Cannabis sativa HOM05D002110 ORTHO05D001148 2.2e-10 72.8 184 29.9
AagrBONN_evm.TU.Sc2ySwM_228.4044 Anthoceros agrestis HOM05D002515 ORTHO05D005796 2.9e-10 72.4 405 24.2
Cfa015480 Carpinus fangiana HOM05D002110 ORTHO05D001148 3.8e-10 72.0 327 23.9
Ah.04g154900 Amaranthus hybridus HOM05D002110 ORTHO05D001148 6.5e-10 71.2 316 22.8
CSS0027216 Camellia sinensis var. sinensis HOM05D002110 ORTHO05D001148 6.5e-10 71.2 317 23.7
SMO170G0049 Selaginella moellendorffii HOM05D004610 ORTHO05D001148 1.4e-09 70.1 376 22.9
Mapoly0065s0025 Marchantia polymorpha HOM05D026222 ORTHO05D001588 2.5e-09 69.3 319 24.8
DCAR_030482 Daucus carota HOM05D002110 ORTHO05D001148 5.5e-09 68.2 121 30.6
Solyc02g086130.4 Solanum lycopersicum HOM05D004610 ORTHO05D001148 5.5e-09 68.2 197 26.4
AUR62016148 Chenopodium quinoa HOM05D002110 ORTHO05D001148 9.4e-09 67.4 299 23.4
PSO210G7621 Papaver somniferum HOM05D002110 ORTHO05D001148 9.4e-09 67.4 295 23.1
Hund11953 Selenicereus undatus HOM05D002110 ORTHO05D001148 9.4e-09 67.4 304 22.0
TWI53G0037 Tripterygium wilfordii HOM05D004610 ORTHO05D001148 9.4e-09 67.4 147 30.6
TAR365G0698 Trochodendron aralioides HOM05D002110 ORTHO05D001148 9.4e-09 67.4 128 30.5
arahy.Tifrunner.gnm1.ann1.LS1PSE Arachis hypogaea HOM05D002110 ORTHO05D001148 1.2e-08 67.0 115 27.8
Nn4g25653 Nelumbo nucifera HOM05D002110 ORTHO05D001148 1.2e-08 67.0 312 25.3
Sopen02g030820 Solanum pennellii HOM05D004610 ORTHO05D001148 1.2e-08 67.0 197 25.9
Sopen01g026550 Solanum pennellii HOM05D002110 ORTHO05D001148 1.6e-08 66.6 186 25.3
Solyc01g060410.4 Solanum lycopersicum HOM05D002110 ORTHO05D001148 2.1e-08 66.2 186 25.3
unitig_749.g13375 Utricularia gibba HOM05D002110 ORTHO05D001148 2.1e-08 66.2 145 30.3
CiPaw.07G027700 Carya illinoinensis HOM05D002110 ORTHO05D001148 2.7e-08 65.9 116 27.6
Gohir.A11G272300 Gossypium hirsutum HOM05D002110 ORTHO05D001148 2.7e-08 65.9 156 24.4
Peaxi162Scf00065g00328 Petunia axillaris HOM05D002110 ORTHO05D001148 2.7e-08 65.9 296 25.7
Actinidia14271 Actinidia chinensis HOM05D002110 ORTHO05D001148 3.6e-08 65.5 114 32.5
arahy.Tifrunner.gnm1.ann1.32S0SQ Arachis hypogaea HOM05D002110 ORTHO05D001148 4.7e-08 65.1 115 27.8
Oeu045891.1 Olea europaea HOM05D002110 ORTHO05D001148 6.1e-08 64.7 190 25.8
DCAR_002502 Daucus carota HOM05D002110 ORTHO05D001148 1.0e-07 63.9 112 33.0
TPR.G2607 Trifolium pratense HOM05D002110 ORTHO05D001148 1.0e-07 63.9 145 28.3
EL10Ac3g04924 Beta vulgaris HOM05D002110 ORTHO05D001148 1.4e-07 63.5 115 28.7
Lj3C827G8 Lonicera japonica HOM05D002110 ORTHO05D001148 1.4e-07 63.5 306 21.6
Nn3g21631 Nelumbo nucifera HOM05D002110 ORTHO05D001148 1.4e-07 63.5 124 29.8
TWI36G1140 Tripterygium wilfordii HOM05D002110 ORTHO05D001148 1.4e-07 63.5 193 26.9
Glyma.09G039000 Glycine max HOM05D002110 ORTHO05D001148 1.8e-07 63.2 307 21.8
SMO165G0117 Selaginella moellendorffii HOM05D002110 ORTHO05D001148 1.8e-07 63.2 308 25.0
Migut.N00058 Erythranthe guttata HOM05D002110 ORTHO05D001148 2.3e-07 62.8 121 28.9
Hma1.2p1_0008F-1.1_g005780 Hydrangea macrophylla HOM05D002110 ORTHO05D001148 2.3e-07 62.8 183 24.0
QL06p011361 Quercus lobata HOM05D002110 ORTHO05D001148 2.3e-07 62.8 319 22.6
PGSC0003DMG400026403 Solanum tuberosum HOM05D004610 ORTHO05D001148 2.3e-07 62.8 159 27.0
Dinv02077 Davidia involucrata HOM05D002110 ORTHO05D001148 3.0e-07 62.4 125 29.6
Nitab4.5_0000169g0020 Nicotiana tabacum HOM05D002110 ORTHO05D001148 3.9e-07 62.0 112 31.2
MSTRG.24813 Avicennia marina HOM05D002110 ORTHO05D001148 5.1e-07 61.6 318 23.3
ClCG02G015110 Citrullus lanatus HOM05D002110 ORTHO05D001148 5.1e-07 61.6 203 26.6
Lj6g0006757 Lotus japonicus HOM05D002110 ORTHO05D001148 5.1e-07 61.6 300 22.0
SalBow8G0670 Salvia bowleyana HOM05D002110 ORTHO05D001148 5.1e-07 61.6 291 25.1
SalBow8G0820 Salvia bowleyana HOM05D002110 ORTHO05D001148 5.1e-07 61.6 291 25.1
HPP92_011878 Vanilla planifolia HOM05D002110 ORTHO05D001148 5.1e-07 61.6 299 22.4
HPP92_018265 Vanilla planifolia HOM05D002110 ORTHO05D001148 5.1e-07 61.6 117 33.3
AagrBONN_evm.TU.Sc2ySwM_344.4773 Anthoceros agrestis HOM05D026222 ORTHO05D015879 6.7e-07 61.2 336 25.0
AUR62000688 Chenopodium quinoa HOM05D002110 ORTHO05D001148 6.7e-07 61.2 113 27.4
COL.COLO4_09347 Corchorus olitorius HOM05D004610 ORTHO05D001148 6.7e-07 61.2 166 28.9
CsaV3_2G006910 Cucumis sativus L. HOM05D002110 ORTHO05D001148 6.7e-07 61.2 114 29.8
Gohir.D11G282500 Gossypium hirsutum HOM05D002110 ORTHO05D001148 6.7e-07 61.2 156 23.1
Gorai.007G305300 Gossypium raimondii HOM05D002110 ORTHO05D001148 6.7e-07 61.2 156 23.1
PSO761G0478 Papaver somniferum HOM05D002110 ORTHO05D001148 6.7e-07 61.2 133 26.3
Sopen01g043810 Solanum pennellii HOM05D002110 ORTHO05D001148 6.7e-07 61.2 160 26.9
PGSC0003DMG400014987 Solanum tuberosum HOM05D002110 ORTHO05D001148 6.7e-07 61.2 112 29.5
Glyma.07G242700 Glycine max HOM05D002110 ORTHO05D001148 8.8e-07 60.8 115 25.2
Gorai.011G195300 Gossypium raimondii HOM05D002110 ORTHO05D001148 8.8e-07 60.8 112 31.2
Lalb_Chr07g0182181 Lupinus albus HOM05D002110 ORTHO05D001148 8.8e-07 60.8 311 23.8
Nitab4.5_0001695g0010 Nicotiana tabacum HOM05D002110 ORTHO05D001148 8.8e-07 60.8 112 31.2
Hma1.2p1_0013F.1_g008920 Hydrangea macrophylla HOM05D002110 ORTHO05D001148 1.1e-06 60.5 112 27.7
Oeu019953.1 Olea europaea HOM05D002110 ORTHO05D001148 1.1e-06 60.5 299 25.1
Potri.008G108600 Populus trichocarpa HOM05D002110 ORTHO05D001148 1.1e-06 60.5 307 19.9
AUR62005270 Chenopodium quinoa HOM05D002110 ORTHO05D001148 1.5e-06 60.1 113 25.7
MBI19_g22896_MAGBIO Magnolia biondii HOM05D002110 ORTHO05D001148 1.5e-06 60.1 114 28.9
MBI19_g46294_MAGBIO Magnolia biondii HOM05D002110 ORTHO05D001148 1.5e-06 60.1 112 30.4
MD12G1207600 Malus domestica HOM05D002110 ORTHO05D001148 1.5e-06 60.1 124 26.6
Prupe.6G315200 Prunus persica HOM05D002110 ORTHO05D001148 1.5e-06 60.1 114 32.5
TWI74G1419 Tripterygium wilfordii HOM05D004610 ORTHO05D001148 1.5e-06 60.1 112 31.2
Glyma.17G031500 Glycine max HOM05D002110 ORTHO05D001148 2.0e-06 59.7 115 25.2
Sabra10G0108900 Salix brachista HOM05D002110 ORTHO05D001148 2.0e-06 59.7 183 23.5
Sc09g0002700 Simmondsia chinensis HOM05D002110 ORTHO05D001148 2.0e-06 59.7 112 32.1
Ciclev10004258m.g Citrus clementina HOM05D002110 ORTHO05D001148 2.6e-06 59.3 318 21.1
MBI09_g36995_MAGBIO Magnolia biondii HOM05D004610 ORTHO05D001148 2.6e-06 59.3 112 32.1
Nitab4.5_0006072g0010 Nicotiana tabacum HOM05D002110 ORTHO05D001148 2.6e-06 59.3 159 22.6
Pp3c24_12930 Physcomitrium patens HOM05D026222 ORTHO05D015879 2.6e-06 59.3 460 22.0
EL10Ac4g09833 Beta vulgaris HOM05D002110 ORTHO05D001148 3.3e-06 58.9 113 27.4
Cfa006684 Carpinus fangiana HOM05D002110 ORTHO05D001148 3.3e-06 58.9 114 28.1
Sc19g0003440 Simmondsia chinensis HOM05D002110 ORTHO05D001148 3.3e-06 58.9 125 28.0
MBI18_g09596_MAGBIO Magnolia biondii HOM05D002110 ORTHO05D001148 4.4e-06 58.5 121 28.9
Medtr2g034810 Medicago truncatula HOM05D002110 ORTHO05D001148 4.4e-06 58.5 311 22.2
QL03p018272 Quercus lobata HOM05D002110 ORTHO05D001148 4.4e-06 58.5 184 22.3
Solyc01g100290.4 Solanum lycopersicum HOM05D002110 ORTHO05D001148 4.4e-06 58.5 160 25.6
Aqoxy2G02804 Aquilegia oxysepala HOM05D002110 ORTHO05D001148 5.7e-06 58.2 189 26.5
Lalb_Chr20g0120991 Lupinus albus HOM05D002110 ORTHO05D001148 5.7e-06 58.2 115 24.3
Potri.005G019700 Populus trichocarpa HOM05D002110 ORTHO05D001148 5.7e-06 58.2 127 28.3
Prupe.1G125400 Prunus persica HOM05D002110 ORTHO05D001148 5.7e-06 58.2 135 27.4
Sabra05G0026000 Salix brachista HOM05D002110 ORTHO05D002923 5.7e-06 58.2 112 28.6
SHI18071 Sapria himalayana HOM05D002110 ORTHO05D001148 5.7e-06 58.2 191 24.6
Sp5g04200 Schrenkiella parvula HOM05D002110 ORTHO05D001148 5.7e-06 58.2 162 24.1
VMungo1215G1777 Vigna mungo HOM05D002110 ORTHO05D001148 5.7e-06 58.2 115 25.2
AT3G58650 Arabidopsis thaliana HOM05D002110 ORTHO05D001148 7.4e-06 57.8 173 22.5
Eucgr.A00199 Eucalyptus grandis HOM05D002110 ORTHO05D001148 7.4e-06 57.8 112 29.5
Sabra05G0013200 Salix brachista HOM05D002110 ORTHO05D001148 7.4e-06 57.8 122 28.7
THA.LOC104822857 Tarenaya hassleriana HOM05D001693 ORTHO05D001588 7.4e-06 57.8 318 23.9
VMungo0720G2097 Vigna mungo HOM05D002110 ORTHO05D001148 7.4e-06 57.8 319 20.7
Actinidia15585 Actinidia chinensis HOM05D002110 ORTHO05D001148 9.7e-06 57.4 115 28.7
Cpa.g.sc48.141 Carica papaya HOM05D002110 ORTHO05D001148 9.7e-06 57.4 122 27.9
ClCG06G004760 Citrullus lanatus HOM05D002110 ORTHO05D001148 9.7e-06 57.4 295 24.7
Manes.03G201600 Manihot esculenta HOM05D002110 ORTHO05D001148 9.7e-06 57.4 113 26.5
PSO210G6724 Papaver somniferum HOM05D002110 ORTHO05D001148 9.7e-06 57.4 133 26.3
Psat1g081040 Pisum sativum HOM05D004610 ORTHO05D001148 9.7e-06 57.4 135 28.9


User provided reference genes

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