Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c23_21590 Physcomitrium patens HOM05D006067 ORTHO05D007327 0.0e+00 1712.6 1025 100.0
arahy.Tifrunner.gnm1.ann1.9BW5EX Arachis hypogaea HOM05D006067 ORTHO05D007327 1.7e-13 82.8 111 43.2
Mapoly0061s0049 Marchantia polymorpha HOM05D006067 ORTHO05D007327 2.2e-13 82.4 87 39.1
arahy.Tifrunner.gnm1.ann1.V1MG1J Arachis hypogaea HOM05D006067 ORTHO05D007327 2.9e-13 82.0 111 42.3
SEGI_27593 Sequoiadendron giganteum HOM05D006067 ORTHO05D007327 1.2e-11 76.6 114 43.0
Ciclev10024254m.g Citrus clementina HOM05D006067 ORTHO05D007327 1.6e-11 76.3 111 35.1
Cpa.g.sc77.10 Carica papaya HOM05D006067 ORTHO05D007327 2.7e-11 75.5 99 39.4
TPR.G11309 Trifolium pratense HOM05D006067 ORTHO05D007327 7.8e-11 73.9 95 40.0
Lalb_Chr03g0031151 Lupinus albus HOM05D006067 ORTHO05D007327 1.0e-10 73.6 95 40.0
Thecc.07G117200 Theobroma cacao HOM05D006067 ORTHO05D007327 1.7e-10 72.8 101 38.6
VMungo1127G0097 Vigna mungo HOM05D006067 ORTHO05D007327 1.7e-10 72.8 92 39.1
Aqoxy4G00317 Aquilegia oxysepala HOM05D006067 ORTHO05D007327 2.3e-10 72.4 92 35.9
Lj3g0019341 Lotus japonicus HOM05D006067 ORTHO05D007327 3.0e-10 72.0 89 40.4
Glyma.06G229200 Glycine max HOM05D006067 ORTHO05D007327 3.9e-10 71.6 93 37.6
Gohir.D01G042720 Gossypium hirsutum HOM05D006067 ORTHO05D007327 5.1e-10 71.2 113 34.5
Gorai.002G054500 Gossypium raimondii HOM05D006067 ORTHO05D007327 5.1e-10 71.2 113 34.5
Duzib268G0832 Durio zibethinus HOM05D006067 ORTHO05D007327 6.6e-10 70.9 120 36.7
CSS0029215 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 1.1e-09 70.1 104 36.5
Medtr2g076330 Medicago truncatula HOM05D006067 ORTHO05D007327 1.1e-09 70.1 97 38.1
TPR.G13942 Trifolium pratense HOM05D006067 ORTHO05D007327 1.1e-09 70.1 131 32.8
Peaxi162Scf00111g01468 Petunia axillaris HOM05D001990 ORTHO05D002033 1.5e-09 69.7 118 28.0
Solyc07g062410.4 Solanum lycopersicum HOM05D006067 ORTHO05D007327 1.5e-09 69.7 132 29.5
Nitab4.5_0006953g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 1.9e-09 69.3 114 30.7
Rhsim06G0208300 Rhododendron simsii HOM05D006067 ORTHO05D007327 1.9e-09 69.3 92 34.8
VMungo1080G1893 Vigna mungo HOM05D006067 ORTHO05D007327 1.9e-09 69.3 100 36.0
COL.COLO4_17541 Corchorus olitorius HOM05D006067 ORTHO05D007327 2.5e-09 68.9 110 38.2
Glyma.13G269800 Glycine max HOM05D006067 ORTHO05D007327 2.5e-09 68.9 98 34.7
Gohir.A01G054200 Gossypium hirsutum HOM05D006067 ORTHO05D007327 2.5e-09 68.9 113 33.6
Phvul.005G065400 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 2.5e-09 68.9 113 36.3
Psat4g136000 Pisum sativum HOM05D006067 ORTHO05D007327 2.5e-09 68.9 87 37.9
HPP92_012804 Vanilla planifolia HOM05D006067 ORTHO05D007327 2.5e-09 68.9 106 37.7
Ca_26225_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 3.3e-09 68.6 94 38.3
Lalb_Chr24g0400331 Lupinus albus HOM05D006067 ORTHO05D007327 3.3e-09 68.6 93 36.6
Phvul.011G162500 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 3.3e-09 68.6 96 36.5
Glyma.12G229800 Glycine max HOM05D006067 ORTHO05D007327 4.3e-09 68.2 101 34.7
Nn1g04444 Nelumbo nucifera HOM05D006067 ORTHO05D007327 4.3e-09 68.2 154 27.9
PGSC0003DMG400007100 Solanum tuberosum HOM05D006067 ORTHO05D007327 4.3e-09 68.2 99 31.3
EL10Ac4g08347 Beta vulgaris HOM05D006067 ORTHO05D007327 5.6e-09 67.8 83 38.6
Sopen07g030660 Solanum pennellii HOM05D006067 ORTHO05D007327 5.6e-09 67.8 132 29.5
Glyma.08G245900 Glycine max HOM05D006067 ORTHO05D007327 1.2e-08 66.6 100 34.0
Hund25365 Selenicereus undatus HOM05D006067 ORTHO05D007327 1.2e-08 66.6 83 37.3
arahy.Tifrunner.gnm1.ann1.2G52JQ Arachis hypogaea HOM05D006067 ORTHO05D007327 1.6e-08 66.2 120 30.8
CDE09G1032 Ceratophyllum demersum HOM05D001990 ORTHO05D002033 1.6e-08 66.2 130 30.8
Lalb_Chr14g0365891 Lupinus albus HOM05D006067 ORTHO05D007327 1.6e-08 66.2 100 33.0
vmacro11942 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 2.1e-08 65.9 115 33.9
arahy.Tifrunner.gnm1.ann1.VQ55QZ Arachis hypogaea HOM05D006067 ORTHO05D007327 3.6e-08 65.1 120 30.0
CDE02G3386 Ceratophyllum demersum HOM05D006067 ORTHO05D007327 8.1e-08 63.9 130 30.0
Sopen10g003150 Solanum pennellii HOM05D006067 ORTHO05D007327 8.1e-08 63.9 134 34.3
Lj3g0000770 Lotus japonicus HOM05D006067 ORTHO05D007327 1.1e-07 63.5 110 34.5
SGA_v2.0_scaffold70G23375 Striga asiatica HOM05D006067 ORTHO05D007327 1.1e-07 63.5 117 32.5
Aa31LG4G2200 Aethionema arabicum HOM05D006067 ORTHO05D007327 1.4e-07 63.2 81 37.0
Haze_00805 Corylus avellana HOM05D006067 ORTHO05D007327 1.8e-07 62.8 106 32.1
Carub.0002s2563 Capsella rubella HOM05D006067 ORTHO05D007327 2.4e-07 62.4 107 36.4
Cfa015710 Carpinus fangiana HOM05D006067 ORTHO05D007327 3.1e-07 62.0 93 34.4
Mapoly1798s0001 Marchantia polymorpha HOM05D006067 ORTHO05D007327 3.1e-07 62.0 65 40.0
Oeu031029.1 Olea europaea HOM05D006067 ORTHO05D007327 3.1e-07 62.0 113 36.3
TAR624G0749 Trochodendron aralioides HOM05D006067 ORTHO05D007327 4.0e-07 61.6 99 33.3
ClCG11G017430 Citrullus lanatus HOM05D006067 ORTHO05D007327 5.2e-07 61.2 131 31.3
Thhalv10018481m.g Eutrema salsugineum HOM05D006067 ORTHO05D007327 5.2e-07 61.2 109 32.1
PGR031G0069 Punica granatum HOM05D006067 ORTHO05D007327 6.8e-07 60.8 99 33.3
AUR62042783 Chenopodium quinoa HOM05D006067 ORTHO05D007327 8.9e-07 60.5 79 38.0
Rhsim04G0026500 Rhododendron simsii HOM05D006067 ORTHO05D007327 8.9e-07 60.5 112 32.1
vmacro09492 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 8.9e-07 60.5 110 32.7
HanXRQChr13g0389481 Helianthus annuus HOM05D006067 ORTHO05D007327 1.5e-06 59.7 97 26.8
Sp5g33840 Schrenkiella parvula HOM05D006067 ORTHO05D007327 2.0e-06 59.3 81 34.6
Sed0004545 Sechium edule HOM05D006067 ORTHO05D007327 2.0e-06 59.3 132 34.8
AL2G39210 Arabidopsis lyrata HOM05D006067 ORTHO05D007327 2.6e-06 58.9 81 34.6
MD11G1264000 Malus domestica HOM05D006067 ORTHO05D007327 2.6e-06 58.9 85 34.1
Lsat_1_v5_gn_9_99841 Lactuca sativa HOM05D006067 ORTHO05D007327 4.4e-06 58.2 93 33.3
Sopen10g003170 Solanum pennellii HOM05D006067 ORTHO05D007327 4.4e-06 58.2 98 38.8
Solyc10g007340.3 Solanum lycopersicum HOM05D006067 ORTHO05D007327 7.6e-06 57.4 147 30.6
THA.LOC104812320 Tarenaya hassleriana HOM05D006067 ORTHO05D007327 7.6e-06 57.4 136 31.6


User provided reference genes

Program Settings