Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 1.4e-58 229.2 101 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 3.0e-40 168.3 102 75.5
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 1.9e-39 165.6 101 71.3
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 2.8e-30 135.2 101 61.4
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 6.3e-30 134.0 101 61.4
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 1.1e-29 133.3 101 60.4
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 1.1e-29 133.3 101 60.4
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 2.4e-29 132.1 101 60.4
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 3.1e-29 131.7 101 60.4
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 9.0e-29 130.2 101 59.4
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 9.0e-29 130.2 101 59.4
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 9.0e-29 130.2 101 59.4
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 1.2e-28 129.8 101 58.4
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 1.2e-28 129.8 101 57.4
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 1.5e-28 129.4 101 58.4
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 5.9e-28 127.5 101 57.4
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 7.7e-28 127.1 101 56.4
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 7.7e-28 127.1 101 56.4
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 7.7e-28 127.1 101 57.4
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 1.3e-27 126.3 101 57.4
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 1.7e-27 125.9 101 55.4
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 1.7e-27 125.9 101 56.4
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 1.7e-27 125.9 101 57.4
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 2.2e-27 125.6 101 56.4
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 2.2e-27 125.6 101 56.4
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 6.5e-27 124.0 101 58.4
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 6.5e-27 124.0 99 57.6
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 6.5e-27 124.0 101 55.4
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 6.5e-27 124.0 101 57.4
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 8.5e-27 123.6 101 54.5
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 8.5e-27 123.6 101 54.5
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 8.5e-27 123.6 101 57.4
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 8.5e-27 123.6 101 56.4
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 1.1e-26 123.2 101 60.4
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 1.1e-26 123.2 99 57.6
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 1.4e-26 122.9 99 56.6
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 1.9e-26 122.5 99 53.5
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 1.9e-26 122.5 101 58.4
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 1.9e-26 122.5 101 56.4
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 2.5e-26 122.1 101 56.4
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 2.5e-26 122.1 101 56.4
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 2.5e-26 122.1 101 56.4
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 2.5e-26 122.1 101 56.4
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 3.2e-26 121.7 95 57.9
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 4.2e-26 121.3 101 54.5
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 4.2e-26 121.3 101 54.5
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 4.2e-26 121.3 101 54.5
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 4.2e-26 121.3 101 54.5
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 4.2e-26 121.3 101 56.4
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 4.2e-26 121.3 101 56.4
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 5.5e-26 120.9 101 59.4
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 5.5e-26 120.9 99 58.6
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 5.5e-26 120.9 95 56.8
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 5.5e-26 120.9 101 56.4
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 7.2e-26 120.6 99 54.5
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 7.2e-26 120.6 99 52.5
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 7.2e-26 120.6 101 57.4
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 7.2e-26 120.6 101 57.4
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 9.4e-26 120.2 101 58.4
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 9.4e-26 120.2 101 58.4
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 9.4e-26 120.2 101 58.4
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 9.4e-26 120.2 101 58.4
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 9.4e-26 120.2 101 58.4
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 1.2e-25 119.8 101 57.4
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 1.6e-25 119.4 100 54.0
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 1.6e-25 119.4 101 58.4
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 2.1e-25 119.0 99 50.5
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 2.7e-25 118.6 101 57.4
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 2.7e-25 118.6 101 54.5
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 2.7e-25 118.6 101 56.4
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 4.6e-25 117.9 101 57.4
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 4.6e-25 117.9 101 57.4
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 4.6e-25 117.9 101 52.5
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 4.6e-25 117.9 101 55.4
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 1.0e-24 116.7 101 54.5
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 1.0e-24 116.7 101 53.5
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 1.4e-24 116.3 101 56.4
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 1.8e-24 115.9 101 55.4
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 2.3e-24 115.5 99 54.5
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 3.3e-23 111.7 101 50.5
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 5.7e-23 110.9 99 52.5
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 7.4e-23 110.5 101 52.5
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 7.4e-23 110.5 101 52.5
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 7.4e-23 110.5 101 53.5
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 7.4e-23 110.5 101 52.5
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 9.7e-23 110.2 99 46.5
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 2.2e-22 109.0 89 55.1
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 4.8e-22 107.8 101 53.5
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 4.8e-22 107.8 101 53.5
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 1.8e-21 105.9 85 57.6
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 2.0e-20 102.4 101 48.5
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 4.5e-20 101.3 101 47.5
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 4.5e-20 101.3 111 44.1
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 5.0e-19 97.8 89 55.1
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 4.2e-18 94.7 134 38.8
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 2.6e-15 85.5 171 33.9
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 3.3e-15 85.1 71 56.3
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 2.0e-07 59.3 56 48.2
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 4.8e-06 54.7 48 52.1
CBR_g23007 Chara braunii HOM05D007373 ORTHO05D009192 6.3e-06 54.3 98 33.7


User provided reference genes

Program Settings