Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c23_20800 Physcomitrium patens HOM05D004550 ORTHO05D005340 5.2e-145 517.7 261 100.0
Pp3c20_5010 Physcomitrium patens HOM05D004550 ORTHO05D005340 6.4e-103 377.9 259 77.2
Pp3c9_20530 Physcomitrium patens HOM05D004550 ORTHO05D005340 5.7e-51 205.3 183 59.6
AagrBONN_evm.TU.Sc2ySwM_344.2821 Anthoceros agrestis HOM05D004550 ORTHO05D005340 1.8e-44 183.7 168 58.9
Mapoly0021s0017 Marchantia polymorpha HOM05D004550 ORTHO05D005340 1.8e-44 183.7 206 51.5
SEGI_17925 Sequoiadendron giganteum HOM05D004550 ORTHO05D005340 3.8e-39 166.0 160 56.2
SMO356G0701 Selaginella moellendorffii HOM05D004550 ORTHO05D005340 1.6e-37 160.6 155 56.1
MBI19_g03106_MAGBIO Magnolia biondii HOM05D004550 ORTHO05D005340 5.2e-36 155.6 149 57.7
ATR0730G201 Amborella trichopoda HOM05D004550 ORTHO05D005340 6.8e-36 155.2 133 63.2
CSS0021997 Camellia sinensis var. sinensis HOM05D004550 ORTHO05D005340 4.4e-35 152.5 149 57.7
CSS0045485 Camellia sinensis var. sinensis HOM05D004550 ORTHO05D005340 4.4e-35 152.5 149 57.7
Cc11_g12470 Coffea canephora HOM05D004550 ORTHO05D005340 5.7e-35 152.1 131 61.8
Hma1.2p1_0354F.1_g133690 Hydrangea macrophylla HOM05D004550 ORTHO05D005340 5.7e-35 152.1 196 48.0
Atru.chr11.1702 Acer truncatum HOM05D004550 ORTHO05D005340 1.3e-34 151.0 176 51.1
Cfa008917 Carpinus fangiana HOM05D004550 ORTHO05D005340 1.3e-34 151.0 219 45.2
Glyma.01G054200 Glycine max HOM05D004550 ORTHO05D005340 1.3e-34 151.0 141 59.6
SGA_v2.0_scaffold16G07747 Striga asiatica HOM05D004550 ORTHO05D005340 1.7e-34 150.6 215 44.2
TAR371G1135 Trochodendron aralioides HOM05D004550 ORTHO05D005340 1.7e-34 150.6 149 59.1
Phvul.002G090800 Phaseolus vulgaris HOM05D004550 ORTHO05D005340 2.2e-34 150.2 141 58.9
Ca_27938_v3 Cicer arietinum L. HOM05D004550 ORTHO05D005340 4.9e-34 149.1 141 58.9
arahy.Tifrunner.gnm1.ann1.F9ESEJ Arachis hypogaea HOM05D004550 ORTHO05D005340 6.4e-34 148.7 141 58.9
VMungo1215G2831 Vigna mungo HOM05D004550 ORTHO05D005340 6.4e-34 148.7 141 58.2
arahy.Tifrunner.gnm1.ann1.M1L69X Arachis hypogaea HOM05D004550 ORTHO05D005340 8.3e-34 148.3 154 55.8
CDE04G2021 Ceratophyllum demersum HOM05D004550 ORTHO05D005340 8.3e-34 148.3 132 61.4
FAN17G0531 Fragaria x ananassa HOM05D004550 ORTHO05D005340 8.3e-34 148.3 176 53.4
Glyma.02G112600 Glycine max HOM05D004550 ORTHO05D005340 8.3e-34 148.3 141 58.9
Peaxi162Scf00364g00223 Petunia axillaris HOM05D004550 ORTHO05D005340 8.3e-34 148.3 131 60.3
CiPaw.05G128700 Carya illinoinensis HOM05D004550 ORTHO05D005340 1.1e-33 147.9 174 52.3
Dinv34106 Davidia involucrata HOM05D004550 ORTHO05D005340 1.1e-33 147.9 149 57.0
Gohir.A12G162200 Gossypium hirsutum HOM05D004550 ORTHO05D005340 1.1e-33 147.9 149 58.4
Aqoxy3G03523 Aquilegia oxysepala HOM05D004550 ORTHO05D005340 1.4e-33 147.5 141 59.6
COL.COLO4_27949 Corchorus olitorius HOM05D004550 ORTHO05D005340 1.4e-33 147.5 164 53.7
Duzib251G0963 Durio zibethinus HOM05D004550 ORTHO05D005340 1.4e-33 147.5 170 51.8
Potri.010G162600 Populus trichocarpa HOM05D004550 ORTHO05D005340 1.4e-33 147.5 131 61.8
Haze_11945 Corylus avellana HOM05D004550 ORTHO05D005340 1.8e-33 147.1 179 49.2
RcHm_v2.0_Chr4g0438981 Rosa chinensis HOM05D004550 ORTHO05D005340 2.4e-33 146.7 152 56.6
TAR629G0577 Trochodendron aralioides HOM05D004550 ORTHO05D005340 2.4e-33 146.7 149 57.0
BcaC03g15080 Brassica carinata HOM05D004550 ORTHO05D005340 3.2e-33 146.4 122 68.0
A02p15870 Brassica napus HOM05D004550 ORTHO05D005340 3.2e-33 146.4 154 57.8
BolC2t08705H Brassica oleracea HOM05D004550 ORTHO05D005340 3.2e-33 146.4 154 57.8
Cpa.g.sc1.80 Carica papaya HOM05D004550 ORTHO05D005340 3.2e-33 146.4 165 52.7
CiPaw.06G089400 Carya illinoinensis HOM05D004550 ORTHO05D005340 3.2e-33 146.4 180 50.0
FvH4_4g30590 Fragaria vesca HOM05D004550 ORTHO05D005340 3.2e-33 146.4 152 56.6
Gohir.D12G165500 Gossypium hirsutum HOM05D004550 ORTHO05D005340 3.2e-33 146.4 149 57.7
Gorai.008G178200 Gossypium raimondii HOM05D004550 ORTHO05D005340 3.2e-33 146.4 149 57.7
Lj2g0016497 Lotus japonicus HOM05D004550 ORTHO05D005340 3.2e-33 146.4 141 56.7
GSVIVG01011473001 Vitis vinifera HOM05D004550 ORTHO05D005340 3.2e-33 146.4 141 56.7
C02p26330 Brassica napus HOM05D004550 ORTHO05D005340 4.1e-33 146.0 154 57.8
FAN07G0354 Fragaria x ananassa HOM05D004550 ORTHO05D005340 4.1e-33 146.0 152 55.9
unitig_21.g20859 Utricularia gibba HOM05D004550 ORTHO05D005340 4.1e-33 146.0 233 43.3
GSVIVG01001334001 Vitis vinifera HOM05D004550 ORTHO05D005340 4.1e-33 146.0 130 58.5
BcaB05g24446 Brassica carinata HOM05D004550 ORTHO05D005340 5.4e-33 145.6 154 57.1
Ciclev10032704m.g Citrus clementina HOM05D004550 ORTHO05D005340 5.4e-33 145.6 176 49.4
DCAR_030983 Daucus carota HOM05D004550 ORTHO05D005340 5.4e-33 145.6 209 47.8
Thhalv10019103m.g Eutrema salsugineum HOM05D004550 ORTHO05D005340 5.4e-33 145.6 154 57.1
Lalb_Chr17g0340931 Lupinus albus HOM05D004550 ORTHO05D005340 5.4e-33 145.6 141 57.4
Potri.008G092300 Populus trichocarpa HOM05D004550 ORTHO05D005340 5.4e-33 145.6 131 60.3
TAR374G1091 Trochodendron aralioides HOM05D004550 ORTHO05D005340 5.4e-33 145.6 154 53.9
Carub.0002s1599 Capsella rubella HOM05D004550 ORTHO05D005340 7.0e-33 145.2 141 58.9
CARHR062270 Cardamine hirsuta HOM05D004550 ORTHO05D005340 7.0e-33 145.2 152 56.6
Nitab4.5_0000334g0090 Nicotiana tabacum HOM05D004550 ORTHO05D005340 7.0e-33 145.2 132 58.3
Nitab4.5_0011843g0010 Nicotiana tabacum HOM05D004550 ORTHO05D005340 7.0e-33 145.2 132 58.3
Sp5g24440 Schrenkiella parvula HOM05D004550 ORTHO05D005340 7.0e-33 145.2 154 57.8
Sc04g0007790 Simmondsia chinensis HOM05D004550 ORTHO05D005340 7.0e-33 145.2 158 55.7
Duzib268G1083 Durio zibethinus HOM05D004550 ORTHO05D005340 9.2e-33 144.8 164 51.8
TWI31G0520 Tripterygium wilfordii HOM05D004550 ORTHO05D005340 9.2e-33 144.8 146 59.6
AT1G69390 Arabidopsis thaliana HOM05D004550 ORTHO05D005340 1.2e-32 144.4 154 56.5
EL10Ac6g13282 Beta vulgaris HOM05D004550 ORTHO05D005340 1.2e-32 144.4 131 59.5
HanXRQChr12g0362721 Helianthus annuus HOM05D004550 ORTHO05D005340 1.2e-32 144.4 141 56.0
Actinidia19927 Actinidia chinensis HOM05D004550 ORTHO05D005340 1.6e-32 144.1 131 58.0
ClCG09G021950 Citrullus lanatus HOM05D004550 ORTHO05D005340 1.6e-32 144.1 141 57.4
Eucgr.B03186 Eucalyptus grandis HOM05D004550 ORTHO05D005340 1.6e-32 144.1 163 52.8
Nn3g17356 Nelumbo nucifera HOM05D004550 ORTHO05D005340 1.6e-32 144.1 146 56.8
QL03p070023 Quercus lobata HOM05D004550 ORTHO05D005340 1.6e-32 144.1 141 56.0
AL2G28500 Arabidopsis lyrata HOM05D004550 ORTHO05D005340 2.0e-32 143.7 154 55.8
MSTRG.7770 Avicennia marina HOM05D004550 ORTHO05D005340 2.0e-32 143.7 156 54.5
TPR.G30749 Trifolium pratense HOM05D004550 ORTHO05D005340 2.0e-32 143.7 141 57.4
Sopen05g007540 Solanum pennellii HOM05D004550 ORTHO05D005340 2.7e-32 143.3 131 57.3
BcaB03g15897 Brassica carinata HOM05D004550 ORTHO05D005340 3.5e-32 142.9 153 57.5
BraA07t31157Z Brassica rapa HOM05D004550 ORTHO05D005340 3.5e-32 142.9 153 56.9
Migut.L01230 Erythranthe guttata HOM05D004550 ORTHO05D005340 3.5e-32 142.9 131 58.0
Solyc05g012710.4 Solanum lycopersicum HOM05D004550 ORTHO05D005340 3.5e-32 142.9 131 57.3
SGA_v2.0_scaffold36G14423 Striga asiatica HOM05D004550 ORTHO05D005340 3.5e-32 142.9 134 59.7
vmacro01339 Vaccinium macrocarpon HOM05D004550 ORTHO05D005340 3.5e-32 142.9 141 56.0
CAN.G1200.3 Capsicum annuum HOM05D004550 ORTHO05D005340 4.6e-32 142.5 131 57.3
Manes.05G107100 Manihot esculenta HOM05D004550 ORTHO05D005340 4.6e-32 142.5 163 50.3
PSO063G5570 Papaver somniferum HOM05D004550 ORTHO05D005340 4.6e-32 142.5 149 54.4
PSO063G6186 Papaver somniferum HOM05D004550 ORTHO05D005340 4.6e-32 142.5 149 54.4
Prupe.3G261900 Prunus persica HOM05D004550 ORTHO05D005340 4.6e-32 142.5 185 49.2
Hund05856 Selenicereus undatus HOM05D004550 ORTHO05D005340 4.6e-32 142.5 141 55.3
Sabra08G0069100 Salix brachista HOM05D004550 ORTHO05D005340 5.9e-32 142.1 131 59.5
Sed0017620 Sechium edule HOM05D004550 ORTHO05D005340 5.9e-32 142.1 174 48.9
Aa31LG4G11470 Aethionema arabicum HOM05D004550 ORTHO05D005340 7.8e-32 141.7 121 66.9
A07p35690 Brassica napus HOM05D004550 ORTHO05D005340 7.8e-32 141.7 153 56.9
C06p40530 Brassica napus HOM05D004550 ORTHO05D005340 7.8e-32 141.7 153 56.9
BolC6t39378H Brassica oleracea HOM05D004550 ORTHO05D005340 7.8e-32 141.7 153 56.9
MELO3C002974.2 Cucumis melo HOM05D004550 ORTHO05D005340 7.8e-32 141.7 153 53.6
CsaV3_5G025150 Cucumis sativus L. HOM05D004550 ORTHO05D005340 7.8e-32 141.7 153 53.6
Medtr5g043020 Medicago truncatula HOM05D004550 ORTHO05D005340 7.8e-32 141.7 149 55.7
Nn4g23307 Nelumbo nucifera HOM05D004550 ORTHO05D005340 7.8e-32 141.7 146 56.8
FAN12G3802 Fragaria x ananassa HOM05D004550 ORTHO05D005340 1.0e-31 141.4 141 58.2
PGSC0003DMG400028333 Solanum tuberosum HOM05D004550 ORTHO05D005340 1.0e-31 141.4 131 57.3
Manes.05G087100 Manihot esculenta HOM05D004550 ORTHO05D005340 1.3e-31 141.0 141 57.4
Os12g0498400 Oryza sativa ssp. japonica HOM05D004550 ORTHO05D005340 1.3e-31 141.0 216 42.6
Ah.03g134600 Amaranthus hybridus HOM05D004550 ORTHO05D005340 1.7e-31 140.6 141 56.0
Sabra10G0123800 Salix brachista HOM05D001252 ORTHO05D005340 1.7e-31 140.6 131 58.8
Thecc.02G338200 Theobroma cacao HOM05D004550 ORTHO05D005340 1.7e-31 140.6 164 50.6
MSTRG.729 Avicennia marina HOM05D004550 ORTHO05D005340 2.3e-31 140.2 133 57.9
Psat2g127440 Pisum sativum HOM05D004550 ORTHO05D005340 2.3e-31 140.2 141 56.0
THA.LOC104822027 Tarenaya hassleriana HOM05D004550 ORTHO05D005340 2.3e-31 140.2 168 52.4
CANSAT64G2188 Cannabis sativa HOM05D004550 ORTHO05D005340 3.0e-31 139.8 165 50.3
FAN22G1576 Fragaria x ananassa HOM05D004550 ORTHO05D005340 3.0e-31 139.8 166 53.6
PGR102G3210 Punica granatum HOM05D004550 ORTHO05D005340 3.0e-31 139.8 155 53.5
Prupe.1G281100 Prunus persica HOM05D004550 ORTHO05D005340 3.9e-31 139.4 153 53.6
SMO141G0150 Selaginella moellendorffii HOM05D004550 ORTHO05D005340 5.0e-31 139.0 141 52.5
TWI79G1514 Tripterygium wilfordii HOM05D004550 ORTHO05D005340 5.0e-31 139.0 144 56.9
ClCG05G023910 Citrullus lanatus HOM05D004550 ORTHO05D005340 6.6e-31 138.7 134 57.5
Actinidia31956 Actinidia chinensis HOM05D004550 ORTHO05D005340 8.6e-31 138.3 153 51.6
DCAR_007179 Daucus carota HOM05D004550 ORTHO05D005340 8.6e-31 138.3 162 48.1
ECA233G5814 Erigeron canadensis HOM05D004550 ORTHO05D005340 8.6e-31 138.3 141 53.2
HanXRQChr17g0545411 Helianthus annuus HOM05D004550 ORTHO05D005340 8.6e-31 138.3 144 52.8
Oeu021093.1 Olea europaea HOM05D004550 ORTHO05D005340 8.6e-31 138.3 131 57.3
Rhsim12G0077600 Rhododendron simsii HOM05D004550 ORTHO05D005340 8.6e-31 138.3 141 54.6
FvH4_6g47773 Fragaria vesca HOM05D004550 ORTHO05D005340 2.5e-30 136.7 156 51.3
FAN14G0263 Fragaria x ananassa HOM05D004550 ORTHO05D005340 2.5e-30 136.7 156 51.3
RcHm_v2.0_Chr2g0166971 Rosa chinensis HOM05D004550 ORTHO05D005340 2.5e-30 136.7 176 49.4
CsaV3_5G033110 Cucumis sativus L. HOM05D004550 ORTHO05D005340 4.3e-30 136.0 163 49.7
FAN05G1708 Fragaria x ananassa HOM05D004550 ORTHO05D005340 4.3e-30 136.0 156 51.3
MELO3C012132.2 Cucumis melo HOM05D004550 ORTHO05D005340 7.3e-30 135.2 145 53.8
Lalb_Chr04g0255821 Lupinus albus HOM05D004550 ORTHO05D005340 9.5e-30 134.8 141 53.9
HPP92_018458 Vanilla planifolia HOM05D004550 ORTHO05D005340 1.6e-29 134.0 143 49.7
Lsat_1_v5_gn_8_46800 Lactuca sativa HOM05D004550 ORTHO05D005340 2.1e-29 133.7 152 50.0
Potri.004G121000 Populus trichocarpa HOM05D004550 ORTHO05D005340 2.1e-29 133.7 110 60.9
Ah.02g129300 Amaranthus hybridus HOM05D004550 ORTHO05D005340 3.6e-29 132.9 131 54.2
MD09G1057200 Malus domestica HOM05D004550 ORTHO05D005340 3.6e-29 132.9 110 64.5
Sed0010995 Sechium edule HOM05D004550 ORTHO05D005340 3.6e-29 132.9 127 56.7
HanXRQChr08g0210541 Helianthus annuus HOM05D004550 ORTHO05D005340 4.7e-29 132.5 146 52.7
HanXRQChr08g0211031 Helianthus annuus HOM05D004550 ORTHO05D005340 4.7e-29 132.5 146 52.7
Sabra04G0067200 Salix brachista HOM05D004550 ORTHO05D005340 6.2e-29 132.1 135 51.9
Zm00001eb409620 Zea mays HOM05D004550 ORTHO05D005340 1.5e-27 127.5 125 52.8
PSO478G0019 Papaver somniferum HOM05D004550 ORTHO05D005340 2.0e-27 127.1 133 51.9
Thecc.02G337600 Theobroma cacao HOM05D004550 ORTHO05D005340 2.3e-23 113.6 103 61.2
MD16G1066100 Malus domestica HOM05D004550 ORTHO05D005340 2.1e-21 107.1 98 58.2
BcaC08g45895 Brassica carinata HOM05D004550 ORTHO05D005340 3.1e-20 103.2 68 76.5
Gohir.D02G127801 Gossypium hirsutum HOM05D004550 ORTHO05D005340 1.7e-18 97.4 130 45.4
Gorai.005G143600 Gossypium raimondii HOM05D004550 ORTHO05D005340 1.7e-18 97.4 130 45.4
AUR62005866 Chenopodium quinoa HOM05D004550 ORTHO05D005340 5.4e-17 92.4 222 35.1
AUR62032858 Chenopodium quinoa HOM05D004550 ORTHO05D005340 5.4e-17 92.4 141 42.6
PRCOL_00005365 Prasinoderma coloniale HOM05D004550 ORTHO05D005340 2.3e-15 87.0 98 41.8
Cre17.g720350 Chlamydomonas reinhardtii HOM05D004550 ORTHO05D005340 9.5e-14 81.6 95 45.3
Potri.017G088401 Populus trichocarpa HOM05D004550 ORTHO05D005340 1.6e-13 80.9 60 56.7
MCO05G609 Micromonas commoda HOM05D004550 ORTHO05D005340 6.2e-13 79.0 118 36.4
BcaB03g15467 Brassica carinata HOM05D004550 ORTHO05D005340 1.1e-12 78.2 62 69.4
arahy.Tifrunner.gnm1.ann1.QAIU0T Arachis hypogaea HOM05D004550 ORTHO05D005340 3.1e-12 76.6 77 49.4
C06p37000 Brassica napus HOM05D004550 ORTHO05D005340 7.6e-11 72.0 55 67.3
BolC6t38810H Brassica oleracea HOM05D004550 ORTHO05D005340 7.6e-11 72.0 55 67.3
Actinidia33237 Actinidia chinensis HOM05D004550 ORTHO05D005340 7.3e-06 55.5 73 50.7


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