Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c23_20260 Physcomitrium patens HOM05D002897 ORTHO05D008718 7.5e-153 543.9 289 100.0
AagrBONN_evm.TU.Sc2ySwM_117.2821 Anthoceros agrestis HOM05D002897 ORTHO05D008718 1.9e-39 167.2 265 40.8
CDE07G0516 Ceratophyllum demersum HOM05D002897 ORTHO05D008718 5.8e-36 155.6 270 38.5
Aqoxy1G03476 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 1.1e-34 151.4 246 41.5
CSS0022002 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 7.0e-34 148.7 244 39.3
vmacro12177 Vaccinium macrocarpon HOM05D002897 ORTHO05D008718 2.0e-33 147.1 246 39.8
Cfa014332 Carpinus fangiana HOM05D002897 ORTHO05D008718 3.5e-33 146.4 247 40.9
Peaxi162Scf00921g00023 Petunia axillaris HOM05D002897 ORTHO05D008718 3.5e-33 146.4 245 38.8
Nitab4.5_0012091g0010 Nicotiana tabacum HOM05D002897 ORTHO05D008718 4.6e-33 146.0 245 39.2
Nn1g07262 Nelumbo nucifera HOM05D002897 ORTHO05D008718 6.0e-33 145.6 247 40.9
Sed0013072 Sechium edule HOM05D002897 ORTHO05D008718 1.7e-32 144.1 250 40.8
Atru.chr6.3235 Acer truncatum HOM05D002897 ORTHO05D008718 3.0e-32 143.3 247 39.3
Solyc07g049200.4 Solanum lycopersicum HOM05D002897 ORTHO05D008718 3.0e-32 143.3 249 39.4
Sabra14G0118500 Salix brachista HOM05D002897 ORTHO05D008718 3.9e-32 142.9 252 39.3
Gorai.007G171100 Gossypium raimondii HOM05D002897 ORTHO05D008718 5.0e-32 142.5 246 39.4
PGSC0003DMG400000696 Solanum tuberosum HOM05D002897 ORTHO05D008718 5.0e-32 142.5 248 38.3
Cc05_g03270 Coffea canephora HOM05D002897 ORTHO05D008718 8.6e-32 141.7 246 37.0
Gohir.D11G160500 Gossypium hirsutum HOM05D002897 ORTHO05D008718 8.6e-32 141.7 246 39.4
SGA_v2.0_scaffold49G18345 Striga asiatica HOM05D002897 ORTHO05D008718 1.1e-31 141.4 246 37.4
QL08p031170 Quercus lobata HOM05D002897 ORTHO05D008718 1.9e-31 140.6 246 39.4
Actinidia09731 Actinidia chinensis HOM05D002897 ORTHO05D008718 2.5e-31 140.2 251 38.6
Potri.014G156700 Populus trichocarpa HOM05D002897 ORTHO05D008718 2.5e-31 140.2 251 39.8
Sopen07g025210 Solanum pennellii HOM05D002897 ORTHO05D008718 2.5e-31 140.2 246 38.2
Nitab4.5_0000482g0070 Nicotiana tabacum HOM05D002897 ORTHO05D008718 4.3e-31 139.4 250 38.4
TAR624G0001 Trochodendron aralioides HOM05D002897 ORTHO05D008718 4.3e-31 139.4 268 36.6
Cpa.g.sc132.3 Carica papaya HOM05D002897 ORTHO05D008718 5.6e-31 139.0 247 39.7
SEGI_41028 Sequoiadendron giganteum HOM05D002897 ORTHO05D008718 5.6e-31 139.0 274 33.9
Ca_06120_v3 Cicer arietinum L. HOM05D002897 ORTHO05D008718 9.5e-31 138.3 268 36.9
Duzib138G1172 Durio zibethinus HOM05D002897 ORTHO05D008718 2.8e-30 136.7 246 38.2
Prupe.3G212700 Prunus persica HOM05D002897 ORTHO05D008718 2.8e-30 136.7 248 38.3
Hma1.2p1_2044F.1_g312350 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 3.6e-30 136.3 249 36.9
Rhsim06G0166000 Rhododendron simsii HOM05D002897 ORTHO05D008718 3.6e-30 136.3 257 38.1
SalBow1G3579 Salvia bowleyana HOM05D002897 ORTHO05D008718 3.6e-30 136.3 264 36.0
Glyma.14G046500 Glycine max HOM05D002897 ORTHO05D008718 4.7e-30 136.0 273 36.6
Gohir.A11G153700 Gossypium hirsutum HOM05D002897 ORTHO05D008718 6.2e-30 135.6 246 39.0
Manes.13G067750 Manihot esculenta HOM05D002897 ORTHO05D008718 6.2e-30 135.6 248 39.9
SalBow1G2496 Salvia bowleyana HOM05D002897 ORTHO05D008718 8.0e-30 135.2 264 35.6
Glyma.02G270500 Glycine max HOM05D002897 ORTHO05D008718 1.1e-29 134.8 270 37.4
CiPaw.03G157200 Carya illinoinensis HOM05D002897 ORTHO05D008718 1.4e-29 134.4 247 38.1
AUR62035641 Chenopodium quinoa HOM05D002897 ORTHO05D008718 1.4e-29 134.4 248 37.9
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 1.4e-29 134.4 252 36.5
ClCG02G002140 Citrullus lanatus HOM05D002897 ORTHO05D008718 1.8e-29 134.0 246 39.4
Oeu051891.2 Olea europaea HOM05D002897 ORTHO05D008718 1.8e-29 134.0 268 35.4
Haze_12787 Corylus avellana HOM05D002897 ORTHO05D008718 2.3e-29 133.7 266 38.0
Manes.13G067751 Manihot esculenta HOM05D002897 ORTHO05D008718 3.1e-29 133.3 247 38.5
Medtr5g085980 Medicago truncatula HOM05D002897 ORTHO05D008718 4.0e-29 132.9 265 37.0
Thecc.01G180000 Theobroma cacao HOM05D002897 ORTHO05D008718 4.0e-29 132.9 246 38.2
FvH4_6g42620 Fragaria vesca HOM05D002897 ORTHO05D008718 5.2e-29 132.5 247 38.1
Sc06g0009610 Simmondsia chinensis HOM05D002897 ORTHO05D008718 5.2e-29 132.5 273 34.8
FAN05G4893 Fragaria x ananassa HOM05D002897 ORTHO05D008718 6.8e-29 132.1 247 38.1
FAN02G2770 Fragaria x ananassa HOM05D002897 ORTHO05D008718 8.9e-29 131.7 247 37.7
PSO210G2604 Papaver somniferum HOM05D002897 ORTHO05D008718 8.9e-29 131.7 270 34.1
THA.LOC104826141 Tarenaya hassleriana HOM05D002897 ORTHO05D008718 8.9e-29 131.7 264 36.7
TWI18G1283 Tripterygium wilfordii HOM05D002897 ORTHO05D008718 8.9e-29 131.7 251 40.6
Migut.H01234 Erythranthe guttata HOM05D002897 ORTHO05D008718 1.2e-28 131.3 253 37.9
Ciclev10016301m.g Citrus clementina HOM05D002897 ORTHO05D008718 1.5e-28 131.0 252 38.9
Phvul.008G211400 Phaseolus vulgaris HOM05D002897 ORTHO05D008718 4.4e-28 129.4 270 35.6
ECA234G1553 Erigeron canadensis HOM05D002897 ORTHO05D008718 7.5e-28 128.6 247 36.0
Lalb_Chr04g0249891 Lupinus albus HOM05D002897 ORTHO05D008718 9.8e-28 128.3 268 36.6
Psat4g114440 Pisum sativum HOM05D002897 ORTHO05D008718 1.3e-27 127.9 263 36.1
MELO3C018838.2 Cucumis melo HOM05D002897 ORTHO05D008718 1.7e-27 127.5 254 37.8
TPR.G14446 Trifolium pratense HOM05D002897 ORTHO05D008718 2.2e-27 127.1 270 35.9
Thhalv10008572m.g Eutrema salsugineum HOM05D002897 ORTHO05D008718 2.9e-27 126.7 245 36.7
Zm00001eb280010 Zea mays HOM05D002897 ORTHO05D008718 2.9e-27 126.7 247 36.8
CsaV3_7G003360 Cucumis sativus L. HOM05D002897 ORTHO05D008718 6.4e-27 125.6 251 37.5
HanXRQChr12g0373611 Helianthus annuus HOM05D002897 ORTHO05D008718 6.4e-27 125.6 251 36.7
RcHm_v2.0_Chr2g0158471 Rosa chinensis HOM05D002897 ORTHO05D008718 6.4e-27 125.6 249 37.3
Sp1g03930 Schrenkiella parvula HOM05D002897 ORTHO05D008718 8.3e-27 125.2 245 38.4
HPP92_017354 Vanilla planifolia HOM05D002897 ORTHO05D008718 8.3e-27 125.2 236 38.6
MBI19_g24999_MAGBIO Magnolia biondii HOM05D002897 ORTHO05D008718 1.1e-26 124.8 249 37.8
BcaB07g32946 Brassica carinata HOM05D002897 ORTHO05D008718 1.9e-26 124.0 245 38.4
GSVIVG01030483001 Vitis vinifera HOM05D002897 ORTHO05D008718 1.9e-26 124.0 249 36.5
AT1G05060 Arabidopsis thaliana HOM05D002897 ORTHO05D008718 2.4e-26 123.6 248 37.9
BcaC05g27288 Brassica carinata HOM05D002897 ORTHO05D008718 2.4e-26 123.6 245 38.4
BraA09t38920Z Brassica rapa HOM05D002897 ORTHO05D008718 2.4e-26 123.6 245 38.4
VMungo0647G1784 Vigna mungo HOM05D002897 ORTHO05D008718 2.4e-26 123.6 270 35.2
BolC5t31920H Brassica oleracea HOM05D002897 ORTHO05D008718 4.1e-26 122.9 245 38.0
AUR62017163 Chenopodium quinoa HOM05D002897 ORTHO05D008718 4.1e-26 122.9 256 34.0
MSTRG.14141 Avicennia marina HOM05D002897 ORTHO05D008718 5.4e-26 122.5 247 34.8
Os06g0239700 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D008718 9.2e-26 121.7 250 36.8
AL1G14810 Arabidopsis lyrata HOM05D002897 ORTHO05D008718 1.2e-25 121.3 248 37.1
arahy.Tifrunner.gnm1.ann1.QRVI7E Arachis hypogaea HOM05D002897 ORTHO05D008718 1.2e-25 121.3 274 33.2
arahy.Tifrunner.gnm1.ann1.YEZ88R Arachis hypogaea HOM05D002897 ORTHO05D008718 3.5e-25 119.8 274 32.8
Aqoxy1G03469 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 6.0e-25 119.0 252 35.7
Carub.0001s0433 Capsella rubella HOM05D002897 ORTHO05D008718 6.0e-25 119.0 246 37.4
MD17G1102200 Malus domestica HOM05D002897 ORTHO05D008718 3.9e-24 116.3 228 39.0
Lsat_1_v5_gn_5_123640 Lactuca sativa HOM05D002897 ORTHO05D008718 5.1e-24 115.9 247 32.4
EL10Ac4g07512 Beta vulgaris HOM05D002897 ORTHO05D008718 6.6e-24 115.5 254 35.0
Eucgr.A01101 Eucalyptus grandis HOM05D002897 ORTHO05D008718 1.1e-23 114.8 264 33.3
A09p33710 Brassica napus HOM05D002897 ORTHO05D008718 3.6e-22 109.8 270 34.8
LjContig00564g0002899 Lotus japonicus HOM05D002897 ORTHO05D008718 6.2e-22 109.0 265 31.3
C05p31940 Brassica napus HOM05D002897 ORTHO05D008718 1.1e-21 108.2 270 34.4
Hma1.2p1_1986F.1_g310090 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 1.1e-21 108.2 206 34.0
CARHR004510 Cardamine hirsuta HOM05D002897 ORTHO05D008718 1.4e-21 107.8 248 35.5
Lj8C128G4 Lonicera japonica HOM05D002897 ORTHO05D008718 2.3e-21 107.1 242 35.1
DCAR_012931 Daucus carota HOM05D002897 ORTHO05D008718 5.2e-21 105.9 248 34.7
FAN14G2576 Fragaria x ananassa HOM05D002897 ORTHO05D008718 6.8e-21 105.5 247 35.6
Hma1.2p1_2044F.1_g312360 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 3.7e-19 99.8 203 36.9
SMO356G0703 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 1.6e-17 94.4 233 33.0
SMO290G0011 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 2.1e-17 94.0 233 32.6
unitig_21.g21003 Utricularia gibba HOM05D002897 ORTHO05D008718 1.9e-15 87.4 167 29.3
Aa31LG1G19710 Aethionema arabicum HOM05D002897 ORTHO05D008718 1.2e-14 84.7 294 28.9
ATR0059G011 Amborella trichopoda HOM05D002897 ORTHO05D008718 1.3e-11 74.7 165 37.0
COL.COLO4_21853 Corchorus olitorius HOM05D002897 ORTHO05D008718 2.9e-11 73.6 171 39.2
CSS0034853 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 5.4e-10 69.3 160 30.6
ATR0059G040 Amborella trichopoda HOM05D002897 ORTHO05D008718 6.0e-09 65.9 92 38.0


User provided reference genes

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