Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c23_19910 Physcomitrium patens HOM05D012329 ORTHO05D011519 3.3e-203 711.4 349 100.0
Pp3c23_19770 Physcomitrium patens HOM05D012329 ORTHO05D011519 1.7e-122 443.4 218 99.1
Pp3c23_19830 Physcomitrium patens HOM05D012329 ORTHO05D011519 4.1e-121 438.7 218 98.2
Pp3c8_590 Physcomitrium patens HOM05D012329 ORTHO05D011519 2.3e-103 379.8 265 65.7
Pp3c8_14850 Physcomitrium patens HOM05D012329 ORTHO05D000004 9.9e-75 284.6 336 44.6
Pp3c25_6040 Physcomitrium patens HOM05D012329 ORTHO05D011519 4.5e-59 232.6 218 55.5
Pp3c23_11519 Physcomitrium patens HOM05D012329 ORTHO05D011519 5.7e-30 136.0 137 48.9
SMO010G0021 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 1.7e-21 107.8 218 31.2
SMO307G0027 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 1.1e-20 105.1 216 29.6
SMO010G0002 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 3.1e-20 103.6 218 30.7
SMO010G0005 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 3.1e-20 103.6 233 29.6
Pp3c7_23260 Physcomitrium patens HOM05D012329 ORTHO05D011519 4.5e-19 99.8 82 59.8
Pp3c1_40814 Physcomitrium patens HOM05D012329 ORTHO05D011519 4.2e-17 93.2 107 41.1
SEGI_02278 Sequoiadendron giganteum HOM05D009358 ORTHO05D000006 5.5e-17 92.8 245 29.4
Pp3c11_1270 Physcomitrium patens HOM05D012329 ORTHO05D011519 1.4e-15 88.2 79 54.4
SMO115G0290 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 2.3e-15 87.4 154 35.1
AagrBONN_evm.TU.Sc2ySwM_117.2946 Anthoceros agrestis HOM05D008475 ORTHO05D000004 5.2e-15 86.3 217 30.9
Pp3c27_5846 Physcomitrium patens HOM05D012329 ORTHO05D011519 5.2e-15 86.3 95 44.2
AagrBONN_evm.TU.Sc2ySwM_368.3111 Anthoceros agrestis HOM05D008475 ORTHO05D000004 1.3e-13 81.6 180 33.9
AagrBONN_evm.TU.Sc2ySwM_344.44 Anthoceros agrestis HOM05D008475 ORTHO05D000004 2.2e-13 80.9 186 28.5
SMO177G0008 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 3.7e-13 80.1 176 29.0
AagrBONN_evm.TU.Sc2ySwM_369.106 Anthoceros agrestis HOM05D008475 ORTHO05D009448 1.1e-12 78.6 217 30.4
AagrBONN_evm.TU.Sc2ySwM_368.1340 Anthoceros agrestis HOM05D008475 ORTHO05D000004 1.4e-12 78.2 191 33.0
SMO306G0011 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 1.8e-12 77.8 179 32.4
Pp3c11_10220 Physcomitrium patens HOM05D000003 ORTHO05D000004 2.4e-12 77.4 66 53.0
SMO111G0016 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 2.4e-12 77.4 135 37.8
SMO268G0048 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 3.1e-12 77.0 251 25.5
SMO307G0067 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 4.1e-12 76.6 171 28.1
SMO306G0012 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 5.4e-12 76.3 151 30.5
SMO188G0005 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 7.0e-12 75.9 126 34.1
AagrBONN_evm.TU.Sc2ySwM_368.1103 Anthoceros agrestis HOM05D000003 ORTHO05D000004 1.2e-11 75.1 276 26.1
SMO145G0193 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 4.5e-11 73.2 150 30.0
SHI26861 Sapria himalayana HOM05D000024 ORTHO05D000006 7.7e-11 72.4 157 26.8
SEGI_40957 Sequoiadendron giganteum HOM05D009358 ORTHO05D015186 1.0e-10 72.0 198 29.8
Pp3c23_11520 Physcomitrium patens HOM05D014808 ORTHO05D014252 1.3e-10 71.6 60 53.3
SHI53599 Sapria himalayana HOM05D000024 ORTHO05D000006 1.3e-10 71.6 157 26.8
SHI46882 Sapria himalayana HOM05D000024 ORTHO05D000006 1.7e-10 71.2 157 27.4
SEGI_31533 Sequoiadendron giganteum HOM05D009358 ORTHO05D015186 1.7e-10 71.2 178 29.2
AagrBONN_evm.TU.Sc2ySwM_117.3258 Anthoceros agrestis HOM05D008475 ORTHO05D000004 2.9e-10 70.5 196 28.1
SHI33995 Sapria himalayana HOM05D000024 ORTHO05D000006 2.9e-10 70.5 268 22.0
AagrBONN_evm.TU.Sc2ySwM_340.1129 Anthoceros agrestis HOM05D007366 ORTHO05D000004 3.8e-10 70.1 256 25.4
Aqoxy2G01976 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 5.0e-10 69.7 245 25.3
SHI25086 Sapria himalayana HOM05D000024 ORTHO05D000007 6.5e-10 69.3 157 26.8
SHI48754 Sapria himalayana HOM05D000024 ORTHO05D000006 6.5e-10 69.3 206 24.3
SHI00717 Sapria himalayana HOM05D000024 ORTHO05D000006 8.6e-10 68.9 158 24.7
SHI34393 Sapria himalayana HOM05D000024 ORTHO05D000006 1.5e-09 68.2 267 23.2
SHI15987 Sapria himalayana HOM05D000024 ORTHO05D000006 3.3e-09 67.0 202 25.7
SHI50216 Sapria himalayana HOM05D000024 ORTHO05D000006 3.3e-09 67.0 244 23.4
SHI19802 Sapria himalayana HOM05D000024 ORTHO05D000006 4.2e-09 66.6 146 31.5
SHI24647 Sapria himalayana HOM05D000024 ORTHO05D000006 4.2e-09 66.6 157 25.5
SHI19911 Sapria himalayana HOM05D000024 ORTHO05D000006 5.5e-09 66.2 158 24.1
SHI25432 Sapria himalayana HOM05D000024 ORTHO05D000006 5.5e-09 66.2 157 26.1
AagrBONN_evm.TU.Sc2ySwM_228.2930 Anthoceros agrestis HOM05D008475 ORTHO05D000004 9.5e-09 65.5 178 29.8
SHI47869 Sapria himalayana HOM05D000024 ORTHO05D000006 9.5e-09 65.5 182 24.7
SEGI_06229 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 9.5e-09 65.5 139 32.4
SHI36499 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-08 65.1 134 26.1
SHI53650 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-08 65.1 139 30.2
SHI47673 Sapria himalayana HOM05D000024 ORTHO05D000006 1.6e-08 64.7 245 23.3
SEGI_31456 Sequoiadendron giganteum HOM05D009358 ORTHO05D015187 1.6e-08 64.7 328 24.1
Sabra02G0183300 Salix brachista HOM05D000971 ORTHO05D000901 2.1e-08 64.3 222 26.6
SHI37126 Sapria himalayana HOM05D000024 ORTHO05D000006 2.1e-08 64.3 268 22.4
SEGI_05547 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 2.1e-08 64.3 182 26.9
SEGI_26333 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 2.1e-08 64.3 182 26.9
AagrBONN_evm.TU.Sc2ySwM_340.864 Anthoceros agrestis HOM05D008475 ORTHO05D000004 2.8e-08 63.9 315 25.4
SHI25141 Sapria himalayana HOM05D000024 ORTHO05D000006 2.8e-08 63.9 162 24.1
SHI41567 Sapria himalayana HOM05D000024 ORTHO05D000006 2.8e-08 63.9 134 32.8
SEGI_08404 Sequoiadendron giganteum HOM05D009358 ORTHO05D011087 2.8e-08 63.9 167 28.1
SEGI_10911 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 2.8e-08 63.9 132 29.5
SHI08790 Sapria himalayana HOM05D000024 ORTHO05D000006 3.6e-08 63.5 268 23.1
SHI15854 Sapria himalayana HOM05D000024 ORTHO05D000006 3.6e-08 63.5 235 20.9
SHI12995 Sapria himalayana HOM05D000024 ORTHO05D000006 4.7e-08 63.2 193 23.8
SHI14849 Sapria himalayana HOM05D000024 ORTHO05D000006 4.7e-08 63.2 158 24.7
SHI32241 Sapria himalayana HOM05D000024 ORTHO05D000006 6.1e-08 62.8 189 25.4
SHI38591 Sapria himalayana HOM05D000024 ORTHO05D000006 8.0e-08 62.4 197 22.8
AagrBONN_evm.TU.Sc2ySwM_368.67 Anthoceros agrestis HOM05D008475 ORTHO05D000004 1.0e-07 62.0 149 28.9
SHI45106 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-07 62.0 149 24.2
SHI46464 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-07 62.0 220 22.3
SHI46769 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-07 62.0 220 22.3
SMO358G0068 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 1.0e-07 62.0 125 30.4
SHI03657 Sapria himalayana HOM05D000024 ORTHO05D000006 1.4e-07 61.6 132 28.0
SHI19678 Sapria himalayana HOM05D000024 ORTHO05D000006 1.4e-07 61.6 175 24.6
SHI39165 Sapria himalayana HOM05D000024 ORTHO05D000006 1.4e-07 61.6 145 29.0
SEGI_01369 Sequoiadendron giganteum HOM05D009358 ORTHO05D015187 1.4e-07 61.6 104 35.6
SEGI_22667 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 1.4e-07 61.6 228 25.0
Aqoxy1G02446 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.8e-07 61.2 245 25.3
SHI43208 Sapria himalayana HOM05D000024 ORTHO05D000006 1.8e-07 61.2 157 25.5
SHI47082 Sapria himalayana HOM05D000024 ORTHO05D000006 1.8e-07 61.2 157 24.8
SEGI_41254 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 1.8e-07 61.2 139 28.8
SHI30804 Sapria himalayana HOM05D000024 ORTHO05D000006 2.3e-07 60.8 243 22.6
SHI34405 Sapria himalayana HOM05D000024 ORTHO05D000006 2.3e-07 60.8 198 22.7
SHI45343 Sapria himalayana HOM05D000024 ORTHO05D000006 2.3e-07 60.8 134 24.6
SHI53609 Sapria himalayana HOM05D000024 ORTHO05D000006 2.3e-07 60.8 177 26.0
Dinv25931 Davidia involucrata HOM05D000003 ORTHO05D000006 3.0e-07 60.5 129 31.8
Psat2g122120 Pisum sativum HOM05D007807 ORTHO05D001516 3.0e-07 60.5 156 25.0
SHI15747 Sapria himalayana HOM05D000024 ORTHO05D000006 3.0e-07 60.5 172 25.0
SHI28659 Sapria himalayana HOM05D000024 ORTHO05D000006 3.0e-07 60.5 134 26.9
SHI34403 Sapria himalayana HOM05D000024 ORTHO05D000006 3.0e-07 60.5 243 22.6
SHI38265 Sapria himalayana HOM05D000024 ORTHO05D000006 3.0e-07 60.5 158 24.7
SHI45173 Sapria himalayana HOM05D000024 ORTHO05D000006 3.0e-07 60.5 160 23.1
SHI45369 Sapria himalayana HOM05D000024 ORTHO05D000006 3.0e-07 60.5 160 23.1
SHI49531 Sapria himalayana HOM05D000024 ORTHO05D000006 3.0e-07 60.5 134 26.1
Psat3g104680 Pisum sativum HOM05D007807 ORTHO05D001516 4.0e-07 60.1 145 23.4
SHI24128 Sapria himalayana HOM05D000024 ORTHO05D000006 4.0e-07 60.1 275 21.5
SHI35034 Sapria himalayana HOM05D000024 ORTHO05D000006 4.0e-07 60.1 269 21.2
SHI42357 Sapria himalayana HOM05D000024 ORTHO05D000006 4.0e-07 60.1 223 20.6
SHI49913 Sapria himalayana HOM05D000024 ORTHO05D000006 4.0e-07 60.1 162 24.1
SEGI_22012 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 4.0e-07 60.1 217 25.8
SHI34380 Sapria himalayana HOM05D000024 ORTHO05D000006 5.2e-07 59.7 134 27.6
SHI49050 Sapria himalayana HOM05D000024 ORTHO05D000006 5.2e-07 59.7 157 22.9
SHI51927 Sapria himalayana HOM05D000024 ORTHO05D000007 5.2e-07 59.7 175 24.6
CANSAT80G2238 Cannabis sativa HOM05D000003 ORTHO05D000006 6.8e-07 59.3 171 22.8
Psat1g199520 Pisum sativum HOM05D007807 ORTHO05D001516 6.8e-07 59.3 156 25.0
SHI17668 Sapria himalayana HOM05D000024 ORTHO05D000006 6.8e-07 59.3 157 23.6
SHI25187 Sapria himalayana HOM05D000024 ORTHO05D000006 6.8e-07 59.3 136 25.7
SHI35408 Sapria himalayana HOM05D000024 ORTHO05D000007 6.8e-07 59.3 147 27.9
SHI41647 Sapria himalayana HOM05D000024 ORTHO05D000006 6.8e-07 59.3 134 25.4
SEGI_09009 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 6.8e-07 59.3 115 32.2
SHI03665 Sapria himalayana HOM05D000024 ORTHO05D000006 8.9e-07 58.9 175 25.1
SHI35155 Sapria himalayana HOM05D000024 ORTHO05D000006 8.9e-07 58.9 159 24.5
SHI48494 Sapria himalayana HOM05D000024 ORTHO05D000006 8.9e-07 58.9 134 26.9
SHI48932 Sapria himalayana HOM05D000024 ORTHO05D000006 8.9e-07 58.9 180 25.6
SHI51333 Sapria himalayana HOM05D000024 ORTHO05D000006 8.9e-07 58.9 137 26.3
SHI54321 Sapria himalayana HOM05D000024 ORTHO05D000006 8.9e-07 58.9 160 24.4
Aqoxy5G02935 Aquilegia oxysepala HOM05D000024 ORTHO05D000006 1.2e-06 58.5 245 23.3
Pp3c15_2871 Physcomitrium patens HOM05D019741 ORTHO05D000004 1.2e-06 58.5 132 28.8
SHI23132 Sapria himalayana HOM05D000024 ORTHO05D000007 1.2e-06 58.5 158 25.3
SHI38405 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-06 58.5 157 22.9
SHI50383 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-06 58.5 160 25.6
SHI50769 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-06 58.5 146 26.0
SEGI_13224 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 1.2e-06 58.5 119 31.1
SEGI_40140 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 1.2e-06 58.5 139 27.3
SEGI_41318 Sequoiadendron giganteum HOM05D000003 ORTHO05D000007 1.2e-06 58.5 116 28.4
Psat0s3204g0040 Pisum sativum HOM05D007807 ORTHO05D000006 1.5e-06 58.2 143 23.1
SHI33076 Sapria himalayana HOM05D000024 ORTHO05D000006 1.5e-06 58.2 159 23.3
SHI34336 Sapria himalayana HOM05D000024 ORTHO05D000006 1.5e-06 58.2 144 25.7
Sabra08G0097100 Salix brachista HOM05D000003 ORTHO05D000006 2.0e-06 57.8 287 24.7
SHI34370 Sapria himalayana HOM05D000024 ORTHO05D000006 2.0e-06 57.8 182 22.0
SHI40909 Sapria himalayana HOM05D000024 ORTHO05D000006 2.0e-06 57.8 268 20.9
SEGI_03493 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 2.0e-06 57.8 138 27.5
SEGI_05742 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 2.0e-06 57.8 117 27.4
SEGI_39846 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 2.0e-06 57.8 141 29.1
AagrBONN_evm.TU.Sc2ySwM_117.3005 Anthoceros agrestis HOM05D008475 ORTHO05D000004 2.6e-06 57.4 113 31.9
AUR62033673 Chenopodium quinoa HOM05D000003 ORTHO05D000006 2.6e-06 57.4 295 22.7
SHI34391 Sapria himalayana HOM05D000024 ORTHO05D000006 2.6e-06 57.4 141 27.0
SHI35226 Sapria himalayana HOM05D000024 ORTHO05D000006 2.6e-06 57.4 254 24.8
SHI43710 Sapria himalayana HOM05D000024 ORTHO05D000006 2.6e-06 57.4 250 23.2
SHI45731 Sapria himalayana HOM05D000024 ORTHO05D000006 2.6e-06 57.4 134 27.6
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 2.6e-06 57.4 223 22.9
SHI33030 Sapria himalayana HOM05D000024 ORTHO05D000006 3.4e-06 57.0 170 26.5
SHI48764 Sapria himalayana HOM05D000024 ORTHO05D000006 3.4e-06 57.0 267 21.0
SEGI_03975 Sequoiadendron giganteum HOM05D009358 ORTHO05D015186 3.4e-06 57.0 140 28.6
Psat3g173240 Pisum sativum HOM05D000003 ORTHO05D000004 5.7e-06 56.2 156 25.0
SHI23647 Sapria himalayana HOM05D000024 ORTHO05D000006 5.7e-06 56.2 160 24.4
SEGI_04429 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 5.7e-06 56.2 136 27.2
SEGI_37632 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 5.7e-06 56.2 109 29.4
PSO541G3181 Papaver somniferum HOM05D000003 ORTHO05D000004 7.5e-06 55.8 199 22.6
Psat6g225440 Pisum sativum HOM05D000003 ORTHO05D000006 7.5e-06 55.8 152 24.3
SHI20767 Sapria himalayana HOM05D000024 ORTHO05D000006 7.5e-06 55.8 274 23.0
BcaNung00490 Brassica carinata HOM05D000003 ORTHO05D000006 9.8e-06 55.5 135 28.9
ECA238G1003 Erigeron canadensis HOM05D000582 ORTHO05D000456 9.8e-06 55.5 185 26.5
PSO832G0745 Papaver somniferum HOM05D000003 ORTHO05D000006 9.8e-06 55.5 243 24.7
Psat0s3434g0160 Pisum sativum HOM05D007807 ORTHO05D001516 9.8e-06 55.5 152 24.3
Psat3g133760 Pisum sativum HOM05D000003 ORTHO05D000004 9.8e-06 55.5 152 24.3
Psat4g004920 Pisum sativum HOM05D007807 ORTHO05D001516 9.8e-06 55.5 143 23.1
SHI22985 Sapria himalayana HOM05D000024 ORTHO05D000006 9.8e-06 55.5 161 25.5
SHI34419 Sapria himalayana HOM05D000024 ORTHO05D000006 9.8e-06 55.5 131 25.2
SMO155G0004 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 9.8e-06 55.5 80 40.0
SEGI_29657 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 9.8e-06 55.5 220 26.8
SEGI_35675 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 9.8e-06 55.5 112 30.4


User provided reference genes

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