Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 0.0e+00 1437.6 733 100.0
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 1.4e-208 730.3 658 57.3
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 2.4e-208 729.6 729 53.1
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 1.8e-190 670.2 616 56.8
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 9.7e-189 664.5 621 56.7
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 9.7e-189 664.5 633 55.5
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 2.2e-188 663.3 634 55.4
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 4.8e-188 662.1 630 55.6
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 5.3e-187 658.7 634 54.7
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.5e-186 657.1 619 56.5
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 1.5e-186 657.1 637 54.2
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 2.0e-186 656.8 633 54.5
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 2.0e-186 656.8 624 56.1
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 4.5e-186 655.6 640 54.8
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 7.7e-186 654.8 633 54.8
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 1.0e-185 654.4 632 54.4
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 1.3e-185 654.1 633 55.3
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 1.3e-185 654.1 630 54.9
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 1.7e-185 653.7 624 56.6
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 2.2e-185 653.3 654 54.6
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 2.9e-185 652.9 630 56.2
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 2.9e-185 652.9 633 54.2
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 3.8e-185 652.5 624 56.6
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 5.0e-185 652.1 633 55.3
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 5.0e-185 652.1 633 55.3
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 6.5e-185 651.7 622 56.8
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 6.5e-185 651.7 619 56.7
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 8.5e-185 651.4 623 55.1
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 1.1e-184 651.0 650 54.0
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 1.1e-184 651.0 633 54.0
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.9e-184 650.2 624 55.3
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 1.9e-184 650.2 639 54.1
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 4.2e-184 649.0 635 54.2
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 4.2e-184 649.0 648 54.6
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 9.4e-184 647.9 633 53.4
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 1.6e-183 647.1 637 53.8
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 1.6e-183 647.1 628 54.5
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 2.7e-183 646.4 635 55.0
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 3.6e-183 646.0 627 54.9
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 4.6e-183 645.6 631 53.9
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 7.9e-183 644.8 631 53.7
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 1.0e-182 644.4 624 55.3
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 1.4e-182 644.0 656 54.7
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 1.4e-182 644.0 656 54.7
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 3.0e-182 642.9 627 54.4
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 3.9e-182 642.5 674 52.1
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 5.1e-182 642.1 622 55.5
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 6.7e-182 641.7 631 53.9
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 6.7e-182 641.7 626 54.8
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 8.8e-182 641.3 657 54.0
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 8.8e-182 641.3 657 54.0
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 2.0e-181 640.2 627 54.5
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 2.6e-181 639.8 655 53.7
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 2.6e-181 639.8 628 54.6
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 2.6e-181 639.8 624 55.3
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 3.3e-181 639.4 625 55.5
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 4.4e-181 639.0 626 55.0
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 4.4e-181 639.0 656 53.8
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 9.7e-181 637.9 699 51.1
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 1.3e-180 637.5 632 54.6
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 1.3e-180 637.5 622 56.3
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 1.7e-180 637.1 635 54.0
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.2e-180 636.7 631 52.9
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 2.8e-180 636.3 657 53.9
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 8.2e-180 634.8 656 53.4
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 1.1e-179 634.4 631 54.5
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 1.4e-179 634.0 633 54.5
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 2.4e-179 633.3 586 55.8
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 2.0e-178 630.2 624 54.5
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 2.6e-178 629.8 690 52.3
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 4.5e-178 629.0 624 53.0
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 5.9e-178 628.6 627 54.7
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 1.3e-177 627.5 624 52.9
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 2.2e-177 626.7 634 52.8
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 5.0e-177 625.5 624 52.6
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 4.2e-176 622.5 658 51.5
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 2.7e-175 619.8 586 56.1
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 4.7e-175 619.0 637 53.5
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 1.4e-174 617.5 695 49.9
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 4.4e-173 612.5 687 50.2
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 9.7e-173 611.3 621 53.6
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 4.8e-172 609.0 733 48.0
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 3.1e-171 606.3 644 51.6
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 3.8e-169 599.4 686 49.0
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 3.8e-169 599.4 622 53.9
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.5e-168 597.4 637 51.0
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 7.2e-168 595.1 627 53.1
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 1.8e-166 590.5 573 55.1
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 7.7e-162 575.1 571 53.2
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 2.2e-161 573.5 618 50.2
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 1.5e-160 570.9 605 52.1
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 2.1e-151 540.4 555 53.3
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 2.8e-151 540.0 558 51.6
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 2.6e-141 506.9 715 44.2
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 3.4e-141 506.5 516 52.7
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 3.3e-136 490.0 474 55.3
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 1.2e-135 488.0 635 45.4
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 4.4e-125 453.0 380 60.0
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 8.9e-118 428.7 1207 28.8
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 1.7e-116 424.5 387 55.0
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 2.8e-103 380.6 334 57.5
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 2.1e-95 354.4 398 51.3
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.4e-83 315.1 364 49.7
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 4.2e-83 313.5 258 60.5
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.7e-71 275.0 209 63.6
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 1.0e-68 265.8 430 42.1
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 4.1e-62 243.8 179 66.5
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 4.7e-58 230.3 188 60.6
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 2.9e-44 184.5 300 42.0
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 9.4e-43 179.5 248 45.6
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 4.7e-42 177.2 133 62.4
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.2e-40 172.6 139 57.6
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 2.5e-35 154.8 232 38.8
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 3.7e-31 141.0 223 39.9
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 1.1e-30 139.4 222 40.5
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.5e-27 129.0 103 61.2
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 2.1e-26 125.2 179 44.7
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 2.5e-19 101.7 176 39.2
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 5.4e-14 84.0 51 70.6
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 8.9e-09 66.6 68 51.5
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 1.5e-08 65.9 69 53.6
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 4.9e-07 60.8 151 32.5
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 9.2e-06 56.6 59 45.8


User provided reference genes

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