Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c23_11780 Physcomitrium patens HOM05D001946 ORTHO05D310888 5.5e-56 220.7 110 100.0
Mapoly0158s0015 Marchantia polymorpha HOM05D001946 ORTHO05D002111 1.1e-06 57.0 67 46.3
Mapoly0158s0031 Marchantia polymorpha HOM05D001946 ORTHO05D002111 1.1e-06 57.0 67 46.3
Pp3c14_7180 Physcomitrium patens HOM05D001946 ORTHO05D002111 1.4e-06 56.6 36 75.0
Mapoly0006s0253 Marchantia polymorpha HOM05D001946 ORTHO05D002111 1.8e-06 56.2 67 46.3
Pp3c1_21860 Physcomitrium patens HOM05D001946 ORTHO05D002111 1.8e-06 56.2 67 47.8
MCO07G048 Micromonas commoda HOM05D001946 ORTHO05D002111 2.4e-06 55.8 36 72.2
AagrBONN_evm.TU.Sc2ySwM_368.1183 Anthoceros agrestis HOM05D001946 ORTHO05D002111 3.1e-06 55.5 36 72.2
CBR_g20003 Chara braunii HOM05D001946 ORTHO05D002111 3.1e-06 55.5 36 72.2
Pp3c15_21510 Physcomitrium patens HOM05D001946 ORTHO05D002111 3.1e-06 55.5 67 47.8
Rhsim09G0192900 Rhododendron simsii HOM05D001946 ORTHO05D002111 3.1e-06 55.5 90 41.1
SGA_v2.0_scaffold99G29449 Striga asiatica HOM05D001946 ORTHO05D002111 3.1e-06 55.5 36 72.2
Ah.07g208160 Amaranthus hybridus HOM05D001946 ORTHO05D002111 4.0e-06 55.1 58 50.0
SEGI_05449 Sequoiadendron giganteum HOM05D001946 ORTHO05D002111 4.0e-06 55.1 36 69.4
CAN.G134.26 Capsicum annuum HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
Ca_08273_v3 Cicer arietinum L. HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
CsaV3_5G005450 Cucumis sativus L. HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
Glyma.11G002400 Glycine max HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
Lalb_Chr19g0140391 Lupinus albus HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
Nitab4.5_0002838g0070 Nicotiana tabacum HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
Nitab4.5_0004168g0050 Nicotiana tabacum HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
Peaxi162Scf00220g00042 Petunia axillaris HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
SEGI_35601 Sequoiadendron giganteum HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 69.4
Solyc01g096580.3 Solanum lycopersicum HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
Solyc01g096590.3 Solanum lycopersicum HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
Sopen00g005650 Solanum pennellii HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
Sopen00g005660 Solanum pennellii HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
Sopen01g040310 Solanum pennellii HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
Sopen01g040320 Solanum pennellii HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
PGSC0003DMG400003291 Solanum tuberosum HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
SGA_v2.0_scaffold486G52390 Striga asiatica HOM05D001946 ORTHO05D002111 5.3e-06 54.7 36 66.7
Actinidia03080 Actinidia chinensis HOM05D001946 ORTHO05D002111 6.9e-06 54.3 36 66.7
Actinidia31790 Actinidia chinensis HOM05D001946 ORTHO05D002111 6.9e-06 54.3 36 66.7
MSTRG.17769 Avicennia marina HOM05D001946 ORTHO05D002111 6.9e-06 54.3 36 69.4
CANSAT56G3006 Cannabis sativa HOM05D001946 ORTHO05D002111 6.9e-06 54.3 36 66.7
CsaV3_3G016300 Cucumis sativus L. HOM05D001946 ORTHO05D002111 6.9e-06 54.3 36 66.7
Glyma.19G145100 Glycine max HOM05D001946 ORTHO05D002111 6.9e-06 54.3 36 66.7
SalBow2G3619 Salvia bowleyana HOM05D001946 ORTHO05D002111 6.9e-06 54.3 36 66.7
SalBow4G2922 Salvia bowleyana HOM05D001946 ORTHO05D002111 6.9e-06 54.3 36 66.7
PGSC0003DMG400000965 Solanum tuberosum HOM05D001946 ORTHO05D002111 6.9e-06 54.3 64 50.0
Atru.chr1.659 Acer truncatum HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Actinidia13561 Actinidia chinensis HOM05D005662 ORTHO05D007004 9.0e-06 53.9 32 75.0
MSTRG.123 Avicennia marina HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
CSS0041083 Camellia sinensis var. sinensis HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
CSS0045896 Camellia sinensis var. sinensis HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Cpa.g.sc3.289 Carica papaya HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Cpa.g.sc65.28 Carica papaya HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
CiPaw.03G096100 Carya illinoinensis HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
CiPaw.03G096200 Carya illinoinensis HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
CiPaw.04G062000 Carya illinoinensis HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
CiPaw.09G126500 Carya illinoinensis HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
ClCG01G005170 Citrullus lanatus HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
ClCG05G007460 Citrullus lanatus HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Cc02_g04000 Coffea canephora HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Cc02_g04020 Coffea canephora HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
MELO3C005411.2 Cucumis melo HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
MELO3C006829.2 Cucumis melo HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Duzib068G0885 Durio zibethinus HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Duzib084G0499 Durio zibethinus HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Duzib205G1844 Durio zibethinus HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Glyma.03G142200 Glycine max HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Gohir.A07G039000 Gossypium hirsutum HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Gohir.A09G044500 Gossypium hirsutum HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Gohir.A09G178200 Gossypium hirsutum HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Gohir.A11G007800 Gossypium hirsutum HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Gohir.D07G043200 Gossypium hirsutum HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Gohir.D09G045800 Gossypium hirsutum HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Gohir.D09G173800 Gossypium hirsutum HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Gohir.D11G006900 Gossypium hirsutum HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Gorai.006G064700 Gossypium raimondii HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Gorai.006G195800 Gossypium raimondii HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Gorai.007G008300 Gossypium raimondii HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Hma1.2p1_0654F.1_g196470 Hydrangea macrophylla HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Lj1g0016377 Lotus japonicus HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
MBI04_g30225_MAGBIO Magnolia biondii HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Manes.06G136900 Manihot esculenta HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Manes.14G033700 Manihot esculenta HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Nn1g01142 Nelumbo nucifera HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Nn4g26367 Nelumbo nucifera HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Oeu023227.1 Olea europaea HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Oeu028178.2 Olea europaea HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Oeu039208.2 Olea europaea HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Phvul.002G051100 Phaseolus vulgaris HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
PRCOL_00002469 Prasinoderma coloniale HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 69.4
Sed0002655 Sechium edule HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Sed0011452 Sechium edule HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Sed0017760 Sechium edule HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Sed0022101 Sechium edule HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
SGA_v2.0_scaffold10G05480 Striga asiatica HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
Thecc.03G159400 Theobroma cacao HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
TWI14G1156 Tripterygium wilfordii HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
TWI23G0342 Tripterygium wilfordii HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
TWI63G1249 Tripterygium wilfordii HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
vmacro09891 Vaccinium macrocarpon HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7
HPP92_020437 Vanilla planifolia HOM05D001946 ORTHO05D002111 9.0e-06 53.9 36 66.7


User provided reference genes

Program Settings