Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 8.6e-162 573.5 282 100.0
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 5.1e-106 388.3 282 69.1
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 4.0e-82 308.9 252 58.3
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 3.4e-73 279.3 259 53.3
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 2.2e-72 276.6 253 50.6
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 3.7e-72 275.8 253 50.6
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 1.1e-71 274.2 267 50.6
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 1.8e-71 273.5 253 51.8
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 2.4e-71 273.1 253 51.8
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 4.1e-71 272.3 253 53.0
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 4.1e-71 272.3 254 50.4
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 4.1e-71 272.3 253 51.0
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 7.0e-71 271.6 252 51.6
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 9.2e-71 271.2 253 49.4
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 9.2e-71 271.2 253 50.6
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 1.2e-70 270.8 253 50.6
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 1.2e-70 270.8 262 50.4
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 1.6e-70 270.4 252 51.2
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 1.6e-70 270.4 253 52.2
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 1.6e-70 270.4 252 51.2
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 2.0e-70 270.0 252 51.2
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 2.0e-70 270.0 253 50.6
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 3.5e-70 269.2 253 49.4
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 3.5e-70 269.2 247 52.2
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 7.8e-70 268.1 253 50.2
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 7.8e-70 268.1 253 50.2
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 1.0e-69 267.7 253 53.0
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 1.0e-69 267.7 253 52.2
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 1.0e-69 267.7 256 50.0
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 1.3e-69 267.3 254 50.8
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 1.3e-69 267.3 254 50.8
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 1.3e-69 267.3 254 50.8
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 1.3e-69 267.3 252 51.2
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 1.7e-69 266.9 254 51.2
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 1.7e-69 266.9 252 51.2
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 2.3e-69 266.5 254 50.8
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 2.3e-69 266.5 253 51.0
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 2.3e-69 266.5 253 49.4
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 2.9e-69 266.2 253 49.8
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 2.9e-69 266.2 252 50.4
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.9e-69 266.2 252 51.2
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.9e-69 266.2 252 51.2
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 2.9e-69 266.2 253 49.4
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 5.0e-69 265.4 253 50.2
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 5.0e-69 265.4 252 50.0
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 6.6e-69 265.0 253 51.0
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 8.6e-69 264.6 252 50.4
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 1.1e-68 264.2 253 50.6
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 1.1e-68 264.2 263 49.8
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 1.5e-68 263.8 253 51.0
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 1.5e-68 263.8 253 50.6
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 1.5e-68 263.8 255 50.6
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 1.9e-68 263.5 252 50.8
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 2.5e-68 263.1 253 48.6
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 2.5e-68 263.1 253 49.0
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 2.5e-68 263.1 253 50.2
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 3.3e-68 262.7 252 51.2
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 3.3e-68 262.7 257 49.0
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 3.3e-68 262.7 258 48.8
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 3.3e-68 262.7 253 49.8
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 4.3e-68 262.3 253 50.6
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 4.3e-68 262.3 253 48.6
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 5.6e-68 261.9 254 50.4
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 5.6e-68 261.9 254 50.4
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 5.6e-68 261.9 253 51.4
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 7.3e-68 261.5 253 48.2
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 9.5e-68 261.2 258 48.8
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 9.5e-68 261.2 264 47.7
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 9.5e-68 261.2 253 49.4
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 1.2e-67 260.8 253 49.4
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 2.1e-67 260.0 286 44.8
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 3.6e-67 259.2 253 51.0
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 6.2e-67 258.5 253 48.2
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 8.0e-67 258.1 253 47.8
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.0e-66 257.7 255 47.8
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 1.4e-66 257.3 265 46.4
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 1.4e-66 257.3 253 48.2
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 4.0e-66 255.8 253 47.8
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 4.0e-66 255.8 253 48.2
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 8.9e-66 254.6 254 47.2
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 8.9e-66 254.6 253 47.4
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 8.9e-66 254.6 253 47.0
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 8.9e-66 254.6 254 49.2
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 1.2e-65 254.2 236 49.6
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 3.4e-65 252.7 253 47.8
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 3.4e-65 252.7 228 53.9
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 5.8e-65 251.9 260 47.7
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 1.3e-64 250.8 253 48.2
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 1.7e-64 250.4 258 46.5
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 2.2e-64 250.0 256 46.1
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 4.9e-64 248.8 254 46.9
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 6.4e-64 248.4 254 46.9
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.1e-63 247.7 261 44.8
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 5.4e-63 245.4 253 47.4
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 9.2e-63 244.6 245 47.8
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 9.2e-63 244.6 259 45.2
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.2e-62 244.2 256 44.9
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 1.0e-61 241.1 256 44.9
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 3.9e-61 239.2 256 47.3
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 3.3e-60 236.1 230 50.0
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 4.0e-58 229.2 256 45.7
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 1.7e-53 213.8 235 43.8
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 2.3e-53 213.4 241 46.1
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 4.9e-48 195.7 192 50.5
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 6.8e-42 175.3 137 53.3
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 4.3e-28 129.4 130 43.1
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 3.8e-24 116.3 91 53.8
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.6e-22 110.9 85 55.3
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 2.1e-22 110.5 89 53.9
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 7.9e-22 108.6 88 59.1
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 6.7e-21 105.5 104 47.1
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 6.5e-16 89.0 70 54.3
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 2.5e-15 87.0 68 52.9
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.5e-15 87.0 64 51.6
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 7.1e-15 85.5 70 55.7
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.0e-13 81.6 211 34.1
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.8e-11 73.6 57 59.6


User provided reference genes

Program Settings