Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c22_7820 Physcomitrium patens HOM05D004406 ORTHO05D005660 2.0e-308 1061.6 534 100.0
Mapoly0116s0013 Marchantia polymorpha HOM05D004406 ORTHO05D005660 2.7e-188 662.5 505 65.0
SEGI_06613 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 4.9e-174 615.1 505 61.6
ATR0739G109 Amborella trichopoda HOM05D004406 ORTHO05D005660 3.0e-163 579.3 483 61.1
PSO170G0587 Papaver somniferum HOM05D004406 ORTHO05D005660 1.6e-161 573.5 489 60.1
Actinidia18837 Actinidia chinensis HOM05D004406 ORTHO05D005660 6.2e-161 571.6 495 59.8
MD05G1209100 Malus domestica HOM05D004406 ORTHO05D005660 1.5e-159 567.0 488 60.7
Prupe.4G148400 Prunus persica HOM05D004406 ORTHO05D005660 2.0e-159 566.6 488 60.5
CSS0020755 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 4.5e-159 565.5 489 59.3
PSO528G0243 Papaver somniferum HOM05D004406 ORTHO05D005660 4.5e-159 565.5 489 59.3
CDE06G1959 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 4.9e-158 562.0 507 57.4
COL.COLO4_35795 Corchorus olitorius HOM05D004406 ORTHO05D005660 6.4e-158 561.6 494 58.9
Eucgr.F01412 Eucalyptus grandis HOM05D004406 ORTHO05D005660 1.4e-157 560.5 488 60.9
TWI38G2065 Tripterygium wilfordii HOM05D004406 ORTHO05D005660 3.2e-157 559.3 492 59.8
GSVIVG01009332001 Vitis vinifera HOM05D004406 ORTHO05D005660 4.2e-157 558.9 488 58.4
Gohir.D11G203200 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.2e-156 557.4 488 59.6
Atru.chr9.1518 Acer truncatum HOM05D004406 ORTHO05D005660 1.6e-156 557.0 489 57.7
VMungo1080G1685 Vigna mungo HOM05D004406 ORTHO05D005660 1.6e-156 557.0 488 58.8
arahy.Tifrunner.gnm1.ann1.L0EV17 Arachis hypogaea HOM05D004406 ORTHO05D005660 2.7e-156 556.2 488 57.8
RcHm_v2.0_Chr5g0027601 Rosa chinensis HOM05D004406 ORTHO05D005660 2.7e-156 556.2 495 59.2
Aqoxy6G02573 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 3.5e-156 555.8 489 59.1
CANSAT25G0941 Cannabis sativa HOM05D004406 ORTHO05D005660 3.5e-156 555.8 488 59.0
Gorai.007G217900 Gossypium raimondii HOM05D004406 ORTHO05D005660 3.5e-156 555.8 488 59.4
FvH4_3g16570 Fragaria vesca HOM05D004406 ORTHO05D005660 1.0e-155 554.3 495 58.6
Psat1g012120 Pisum sativum HOM05D004406 ORTHO05D005660 1.0e-155 554.3 492 58.5
Phvul.005G057900 Phaseolus vulgaris HOM05D004406 ORTHO05D005660 1.3e-155 553.9 492 58.1
Ca_03669_v3 Cicer arietinum L. HOM05D004406 ORTHO05D005660 2.3e-155 553.1 488 58.4
Lj3g0010925 Lotus japonicus HOM05D004406 ORTHO05D005660 3.0e-155 552.7 492 58.3
Hund02309 Selenicereus undatus HOM05D004406 ORTHO05D005660 3.9e-155 552.4 494 58.3
Thecc.01G135800 Theobroma cacao HOM05D004406 ORTHO05D005660 3.9e-155 552.4 488 59.4
Cfa019935 Carpinus fangiana HOM05D004406 ORTHO05D005660 5.1e-155 552.0 495 58.2
SMO353G0172 Selaginella moellendorffii HOM05D004406 ORTHO05D005660 6.7e-155 551.6 487 59.3
Migut.M00660 Erythranthe guttata HOM05D004406 ORTHO05D005660 1.1e-154 550.8 487 58.7
Medtr2g069330 Medicago truncatula HOM05D004406 ORTHO05D005660 1.1e-154 550.8 493 57.2
Cpa.g.sc132.61 Carica papaya HOM05D004406 ORTHO05D005660 1.5e-154 550.4 492 58.5
Cc05_g10180 Coffea canephora HOM05D004406 ORTHO05D005660 1.5e-154 550.4 494 56.9
Sc03g0007790 Simmondsia chinensis HOM05D004406 ORTHO05D005660 1.5e-154 550.4 492 58.5
CiPaw.01G106500 Carya illinoinensis HOM05D004406 ORTHO05D005660 3.3e-154 549.3 488 58.4
FAN11G0596 Fragaria x ananassa HOM05D004406 ORTHO05D005660 4.3e-154 548.9 489 58.5
Gohir.A11G220400 Gossypium hirsutum HOM05D004406 ORTHO05D005660 5.6e-154 548.5 488 59.0
Glyma.15G256700 Glycine max HOM05D004406 ORTHO05D005660 7.4e-154 548.1 491 57.6
FAN25G0744 Fragaria x ananassa HOM05D004406 ORTHO05D005660 9.6e-154 547.7 489 58.5
Thhalv10007520m.g Eutrema salsugineum HOM05D004406 ORTHO05D005660 1.6e-153 547.0 487 58.5
FAN21G0297 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.6e-153 547.0 489 58.3
Lalb_Chr25g0284911 Lupinus albus HOM05D004406 ORTHO05D005660 1.6e-153 547.0 487 58.3
TAR376G0792 Trochodendron aralioides HOM05D004406 ORTHO05D005660 2.1e-153 546.6 488 58.0
HanXRQChr11g0329941 Helianthus annuus HOM05D004406 ORTHO05D005660 2.8e-153 546.2 499 58.1
Manes.10G061001 Manihot esculenta HOM05D004406 ORTHO05D005660 2.8e-153 546.2 492 57.9
Ciclev10001005m.g Citrus clementina HOM05D004406 ORTHO05D005660 4.8e-153 545.4 497 58.1
MSTRG.6706 Avicennia marina HOM05D004406 ORTHO05D005660 8.1e-153 544.7 488 58.0
Nn5g30617 Nelumbo nucifera HOM05D004406 ORTHO05D005660 1.4e-152 543.9 488 58.2
Potri.001G394300 Populus trichocarpa HOM05D004406 ORTHO05D005660 1.4e-152 543.9 488 57.8
Dinv26661 Davidia involucrata HOM05D004406 ORTHO05D005660 1.8e-152 543.5 498 57.0
vmacro15158 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 1.8e-152 543.5 467 59.3
vmacro12019 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 6.9e-152 541.6 472 58.7
Carub.0001s1633 Capsella rubella HOM05D004406 ORTHO05D005660 9.0e-152 541.2 487 57.9
Lj1C808G13 Lonicera japonica HOM05D004406 ORTHO05D005660 1.5e-151 540.4 488 57.6
MD10G1195500 Malus domestica HOM05D004406 ORTHO05D005660 2.0e-151 540.0 478 59.0
C05p14870 Brassica napus HOM05D004406 ORTHO05D005660 9.9e-151 537.7 486 57.8
Aqoxy6G03019 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 2.2e-150 536.6 488 57.0
A09p60830 Brassica napus HOM05D004406 ORTHO05D005660 2.9e-150 536.2 487 57.3
BraA09t41456Z Brassica rapa HOM05D004406 ORTHO05D005660 2.9e-150 536.2 487 57.3
Peaxi162Scf00003g04835 Petunia axillaris HOM05D004406 ORTHO05D005660 2.9e-150 536.2 489 56.0
Zm00001eb401770 Zea mays HOM05D004406 ORTHO05D005660 4.9e-150 535.4 488 55.9
A06p12560 Brassica napus HOM05D004406 ORTHO05D005660 6.4e-150 535.0 486 57.4
BolC8t51983H Brassica oleracea HOM05D004406 ORTHO05D005660 8.4e-150 534.6 486 57.4
AT1G16570 Arabidopsis thaliana HOM05D004406 ORTHO05D005660 1.4e-149 533.9 487 57.7
CARHR017050 Cardamine hirsuta HOM05D004406 ORTHO05D005660 1.4e-149 533.9 487 57.3
C08p44420 Brassica napus HOM05D004406 ORTHO05D005660 1.9e-149 533.5 487 57.1
HPP92_025666 Vanilla planifolia HOM05D004406 ORTHO05D005660 1.9e-149 533.5 486 55.1
EL10Ac9g22869 Beta vulgaris HOM05D004406 ORTHO05D005660 2.4e-149 533.1 488 57.6
Os03g0180700 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 2.4e-149 533.1 488 55.7
AL1G28740 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 5.5e-149 531.9 487 56.9
ECA236G4460 Erigeron canadensis HOM05D004406 ORTHO05D005660 1.2e-148 530.8 495 57.6
BraA06t24419Z Brassica rapa HOM05D004406 ORTHO05D005660 1.6e-148 530.4 486 57.0
Aa31LG7G1110 Aethionema arabicum HOM05D004406 ORTHO05D005660 2.1e-148 530.0 489 56.2
Sp1g14730 Schrenkiella parvula HOM05D004406 ORTHO05D005660 2.1e-148 530.0 487 57.5
BolC5t30202H Brassica oleracea HOM05D004406 ORTHO05D005660 2.7e-148 529.6 486 57.0
Sed0020103 Sechium edule HOM05D004406 ORTHO05D005660 3.5e-148 529.3 492 58.1
THA.LOC104808122 Tarenaya hassleriana HOM05D004406 ORTHO05D005660 3.0e-147 526.2 488 57.4
Solyc10g078480.2 Solanum lycopersicum HOM05D004406 ORTHO05D005660 3.9e-147 525.8 488 55.5
PGSC0003DMG400008359 Solanum tuberosum HOM05D004406 ORTHO05D005660 6.7e-147 525.0 488 55.3
Sopen10g029140 Solanum pennellii HOM05D004406 ORTHO05D005660 8.7e-147 524.6 488 55.3
TAR628G1650 Trochodendron aralioides HOM05D004406 ORTHO05D005660 1.1e-146 524.2 479 58.0
Oeu002771.1 Olea europaea HOM05D004406 ORTHO05D005660 1.5e-146 523.9 477 58.1
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 3.3e-146 522.7 487 55.9
PGR004G1399 Punica granatum HOM05D004406 ORTHO05D005660 4.3e-146 522.3 489 58.5
CAN.G960.55 Capsicum annuum HOM05D004406 ORTHO05D005660 2.8e-145 519.6 489 55.4
arahy.Tifrunner.gnm1.ann1.BTSV3Q Arachis hypogaea HOM05D004406 ORTHO05D005660 4.0e-144 515.8 488 55.1
CsaV3_5G023450 Cucumis sativus L. HOM05D004406 ORTHO05D005660 4.0e-144 515.8 489 57.1
ClCG03G009170 Citrullus lanatus HOM05D004406 ORTHO05D005660 9.0e-144 514.6 489 56.0
MELO3C022781.2 Cucumis melo HOM05D004406 ORTHO05D005660 5.8e-143 511.9 490 57.3
CBR_g37525 Chara braunii HOM05D004406 ORTHO05D005660 7.6e-143 511.5 540 50.4
Nitab4.5_0006279g0030 Nicotiana tabacum HOM05D004406 ORTHO05D005660 1.0e-142 511.1 493 55.2
unitig_62.g23080 Utricularia gibba HOM05D004406 ORTHO05D005660 2.9e-142 509.6 489 54.8
Aqoxy113s002 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 1.5e-138 497.3 430 59.1
Oeu044427.1 Olea europaea HOM05D004406 ORTHO05D005660 1.5e-138 497.3 569 48.7
Dinv13306 Davidia involucrata HOM05D004406 ORTHO05D005660 4.3e-138 495.7 461 57.0
BcaC05g25520 Brassica carinata HOM05D004406 ORTHO05D005660 5.7e-138 495.4 466 55.6
QL04p076605 Quercus lobata HOM05D004406 ORTHO05D005660 5.7e-138 495.4 449 58.8
SGA_v2.0_scaffold73G24357 Striga asiatica HOM05D004406 ORTHO05D005660 2.2e-137 493.4 496 53.6
CDE04G2964 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 2.8e-137 493.0 488 53.9
Haze_15516 Corylus avellana HOM05D004406 ORTHO05D005660 1.8e-136 490.3 485 54.2
Duzib187G2008 Durio zibethinus HOM05D004406 ORTHO05D005660 2.4e-136 490.0 489 54.4
AUR62017618 Chenopodium quinoa HOM05D004406 ORTHO05D005660 1.5e-135 487.3 444 57.4
Nitab4.5_0000812g0150 Nicotiana tabacum HOM05D004406 ORTHO05D005660 1.5e-135 487.3 492 52.4
FAN16G0888 Fragaria x ananassa HOM05D004406 ORTHO05D005660 2.2e-134 483.4 483 55.3
Gohir.A09G004700 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.1e-128 464.5 486 53.3
Glyma.08G170200 Glycine max HOM05D004406 ORTHO05D005660 1.4e-128 464.2 436 56.0
SalBow5G0012 Salvia bowleyana HOM05D004406 ORTHO05D005660 3.4e-127 459.5 543 49.2
DCAR_013800 Daucus carota HOM05D004406 ORTHO05D005660 4.5e-127 459.1 496 51.2
Rhsim06G0184400 Rhododendron simsii HOM05D004406 ORTHO05D005660 7.7e-127 458.4 473 53.9
TPR.G9754 Trifolium pratense HOM05D004406 ORTHO05D005660 1.9e-125 453.8 396 58.3
AL6G51100 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 4.1e-120 436.0 492 50.0
FAN21G3885 Fragaria x ananassa HOM05D004406 ORTHO05D005660 5.5e-117 425.6 374 59.6
Lsat_1_v5_gn_7_99701 Lactuca sativa HOM05D004406 ORTHO05D005660 1.0e-115 421.4 503 48.9
SalBow5G1666 Salvia bowleyana HOM05D004406 ORTHO05D005660 7.4e-114 415.2 423 53.2
Gohir.A11G222401 Gossypium hirsutum HOM05D004406 ORTHO05D005660 8.5e-110 401.7 390 54.9
Actinidia35181 Actinidia chinensis HOM05D004406 ORTHO05D005660 9.1e-104 381.7 495 44.6
MCO08G055 Micromonas commoda HOM05D004406 ORTHO05D005660 2.6e-98 363.6 500 42.8
Cre12.g516550 Chlamydomonas reinhardtii HOM05D004406 ORTHO05D005660 1.1e-88 331.6 401 46.1
Gorai.006G005600 Gossypium raimondii HOM05D004406 ORTHO05D005660 2.0e-87 327.4 488 41.0
Rhsim08G0107400 Rhododendron simsii HOM05D004406 ORTHO05D005660 1.1e-80 305.1 221 69.7
PSO017G0585 Papaver somniferum HOM05D004406 ORTHO05D005660 2.4e-80 303.9 332 48.5
Gorai.007G217600 Gossypium raimondii HOM05D004406 ORTHO05D005660 3.5e-79 300.1 360 50.8
SEGI_33737 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 2.6e-74 283.9 274 53.3
Sabra16G0258600 Salix brachista HOM05D004406 ORTHO05D005660 2.2e-73 280.8 287 50.9
SEGI_11739 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 4.1e-72 276.6 201 67.2
PRCOL_00002569 Prasinoderma coloniale HOM05D004406 ORTHO05D005660 1.2e-71 275.0 535 37.0
Haze_26719 Corylus avellana HOM05D004406 ORTHO05D005660 2.5e-69 267.3 505 34.9
Cfa025278 Carpinus fangiana HOM05D004406 ORTHO05D005660 9.9e-66 255.4 486 35.4
Gohir.D11G203050 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.1e-61 241.9 230 60.4
CSS0001722 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.6e-52 211.5 285 44.9
SHI18054 Sapria himalayana HOM05D004406 ORTHO05D005660 2.8e-52 210.7 291 43.3
SGA_v2.0_scaffold181G39778 Striga asiatica HOM05D004406 ORTHO05D005660 2.5e-45 187.6 228 43.9
Actinidia18838 Actinidia chinensis HOM05D004406 ORTHO05D005660 6.0e-39 166.4 184 52.7
SHI18055 Sapria himalayana HOM05D004406 ORTHO05D005660 3.0e-38 164.1 201 48.8
FAN04G0447 Fragaria x ananassa HOM05D004406 ORTHO05D005660 7.4e-37 159.5 171 52.6
Os06g0564800 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 2.1e-36 157.9 106 70.8
CSS0016238 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.2e-34 152.1 111 60.4
CSS0034904 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.0e-33 149.1 111 60.4
CSS0034423 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.3e-33 148.7 111 58.6
AL6G51070 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 2.2e-33 147.9 132 53.8
Zm00001eb421280 Zea mays HOM05D004406 ORTHO05D005660 4.9e-33 146.7 234 39.3
Zm00001eb023770 Zea mays HOM05D003078 ORTHO05D003545 9.3e-32 142.5 225 42.2
Zm00001eb049380 Zea mays HOM05D004406 ORTHO05D005660 8.7e-30 136.0 106 56.6
CSS0028761 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 7.6e-26 122.9 111 52.3
Actinidia18841 Actinidia chinensis HOM05D004406 ORTHO05D005660 1.7e-25 121.7 67 86.6
Zm00001eb180660 Zea mays HOM05D004406 ORTHO05D000467 3.8e-25 120.6 124 55.6
Zm00001eb005970 Zea mays HOM05D004406 ORTHO05D005660 8.4e-25 119.4 148 48.0
Actinidia18840 Actinidia chinensis HOM05D004406 ORTHO05D005660 3.2e-24 117.5 202 37.6
Zm00001eb307610 Zea mays HOM05D004406 ORTHO05D005660 1.6e-20 105.1 92 58.7
TPR.G22508 Trifolium pratense HOM05D004406 ORTHO05D005660 3.7e-20 104.0 98 55.1
Haze_08535 Corylus avellana HOM05D004406 ORTHO05D005660 3.6e-15 87.4 125 44.8
Lj3g0015683 Lotus japonicus HOM05D004406 ORTHO05D036510 7.4e-13 79.7 52 71.2
C02p50710 Brassica napus HOM05D004406 ORTHO05D005660 5.0e-09 67.0 78 50.0


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