Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 5.2e-190 667.9 439 100.0
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 5.2e-190 667.9 439 100.0
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 2.8e-26 124.0 201 42.3
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 1.1e-25 122.1 185 48.6
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 2.2e-23 114.4 184 42.9
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 7.2e-22 109.4 188 38.3
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 3.6e-21 107.1 192 37.0
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 1.8e-20 104.8 189 37.6
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 3.9e-20 103.6 187 38.5
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 5.1e-20 103.2 190 37.9
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 1.5e-19 101.7 183 36.1
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.5e-19 101.7 179 38.0
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 1.5e-19 101.7 179 38.0
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 2.0e-19 101.3 179 38.0
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 3.3e-19 100.5 189 36.0
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 5.7e-19 99.8 188 36.2
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 5.7e-19 99.8 188 36.2
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 7.4e-19 99.4 184 37.0
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 1.3e-18 98.6 180 36.7
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 1.3e-18 98.6 183 37.2
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 2.2e-18 97.8 180 38.9
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 2.2e-18 97.8 189 37.0
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 2.2e-18 97.8 183 36.6
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 2.8e-18 97.4 182 37.4
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 2.8e-18 97.4 183 36.6
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 2.8e-18 97.4 183 35.5
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 4.8e-18 96.7 220 31.8
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 4.8e-18 96.7 186 37.6
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 4.8e-18 96.7 217 33.2
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 4.8e-18 96.7 188 38.8
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 4.8e-18 96.7 188 35.6
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 8.2e-18 95.9 183 36.6
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 1.1e-17 95.5 190 33.7
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 1.4e-17 95.1 218 33.5
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 1.4e-17 95.1 189 34.4
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 1.8e-17 94.7 179 36.9
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 1.8e-17 94.7 182 35.2
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 1.8e-17 94.7 180 37.2
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 1.8e-17 94.7 179 36.9
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 1.8e-17 94.7 200 35.0
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 4.1e-17 93.6 182 34.6
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 4.1e-17 93.6 220 30.0
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 4.1e-17 93.6 179 36.9
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 4.1e-17 93.6 215 33.0
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 5.3e-17 93.2 184 34.2
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 7.0e-17 92.8 190 35.3
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 7.0e-17 92.8 213 31.9
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 7.0e-17 92.8 208 34.1
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 9.1e-17 92.4 179 36.3
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 1.2e-16 92.0 241 31.1
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 1.2e-16 92.0 219 31.5
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 1.2e-16 92.0 183 34.4
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.2e-16 92.0 213 34.3
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 1.6e-16 91.7 179 35.8
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 1.6e-16 91.7 188 34.0
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 1.6e-16 91.7 187 35.8
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 2.0e-16 91.3 184 35.3
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 2.0e-16 91.3 188 34.0
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 2.0e-16 91.3 183 36.1
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 2.0e-16 91.3 196 32.7
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 2.6e-16 90.9 219 30.1
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 2.6e-16 90.9 190 33.2
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 3.5e-16 90.5 237 32.1
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 3.5e-16 90.5 171 35.7
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 3.5e-16 90.5 184 34.2
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 4.5e-16 90.1 184 34.2
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 4.5e-16 90.1 192 35.4
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 4.5e-16 90.1 213 34.3
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 5.9e-16 89.7 193 35.2
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 5.9e-16 89.7 215 33.5
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 5.9e-16 89.7 179 35.8
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 7.7e-16 89.4 190 33.7
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 1.0e-15 89.0 183 32.8
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 1.3e-15 88.6 219 32.4
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 1.3e-15 88.6 211 38.9
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 1.3e-15 88.6 183 35.5
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 1.3e-15 88.6 215 30.7
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 1.7e-15 88.2 211 38.9
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 2.2e-15 87.8 205 32.7
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 2.2e-15 87.8 180 35.6
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 2.9e-15 87.4 182 36.3
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 2.9e-15 87.4 184 34.8
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 2.9e-15 87.4 215 31.2
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 2.9e-15 87.4 181 33.1
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 3.8e-15 87.0 180 33.3
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 5.0e-15 86.7 190 33.2
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 5.0e-15 86.7 244 29.5
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 5.0e-15 86.7 205 32.7
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 6.5e-15 86.3 183 35.0
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.1e-14 85.5 183 34.4
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.1e-14 85.5 184 36.4
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.1e-14 85.5 179 33.0
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 1.5e-14 85.1 183 34.4
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.5e-14 85.1 183 34.4
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 1.9e-14 84.7 183 33.3
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 1.9e-14 84.7 183 35.5
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 3.2e-14 84.0 183 33.9
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 4.2e-14 83.6 190 33.2
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 4.2e-14 83.6 197 32.5
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 5.5e-14 83.2 180 33.3
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 5.5e-14 83.2 211 32.2
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 5.5e-14 83.2 169 35.5
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 9.4e-14 82.4 186 33.9
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 1.2e-13 82.0 212 32.5
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 1.2e-13 82.0 182 33.5
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 1.6e-13 81.6 194 32.0
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 8.0e-13 79.3 215 28.4
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 8.0e-13 79.3 191 34.6
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 3.0e-12 77.4 180 31.1
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 4.0e-12 77.0 222 28.4
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 8.8e-12 75.9 154 33.8
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 8.8e-12 75.9 182 34.1
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 1.5e-11 75.1 224 27.7
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 2.0e-11 74.7 185 35.1
Cre02.g095850 Chlamydomonas reinhardtii HOM05D005155 ORTHO05D006266 5.7e-11 73.2 216 31.0
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 2.2e-10 71.2 96 44.8
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.8e-10 70.9 179 34.1
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 4.8e-10 70.1 96 44.8
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 6.3e-10 69.7 133 39.1
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 8.2e-10 69.3 206 30.1
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 1.4e-09 68.6 186 32.8
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 1.8e-09 68.2 111 39.6
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 4.1e-09 67.0 97 41.2
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 5.9e-08 63.2 92 42.4
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 3.2e-06 57.4 179 25.1
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 4.2e-06 57.0 96 37.5
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 7.2e-06 56.2 237 24.9


User provided reference genes

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