Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c22_2360 Physcomitrium patens HOM05D006025 ORTHO05D008547 7.6e-176 620.5 347 100.0
Mapoly0001s0092 Marchantia polymorpha HOM05D006025 ORTHO05D008547 5.1e-63 245.7 210 59.5
PSO478G1322 Papaver somniferum HOM05D006025 ORTHO05D008547 1.5e-59 234.2 220 55.5
CANSAT78G1034 Cannabis sativa HOM05D006025 ORTHO05D008547 2.2e-58 230.3 211 56.9
Nitab4.5_0000679g0100 Nicotiana tabacum HOM05D006025 ORTHO05D008547 2.9e-58 229.9 219 54.3
Hund25274 Selenicereus undatus HOM05D006025 ORTHO05D008547 2.9e-58 229.9 205 55.1
AagrBONN_evm.TU.Sc2ySwM_117.678 Anthoceros agrestis HOM05D006025 ORTHO05D008547 6.4e-58 228.8 200 59.0
TAR481G0011 Trochodendron aralioides HOM05D006025 ORTHO05D008547 6.4e-58 228.8 223 52.0
Prupe.1G267200 Prunus persica HOM05D006025 ORTHO05D008547 8.4e-58 228.4 224 53.1
DCAR_024490 Daucus carota HOM05D006025 ORTHO05D008547 1.4e-57 227.6 204 54.9
Manes.05G096000 Manihot esculenta HOM05D006025 ORTHO05D008547 1.4e-57 227.6 201 57.2
EL10Ac6g13142 Beta vulgaris HOM05D006025 ORTHO05D008547 2.4e-57 226.9 206 54.4
Actinidia31175 Actinidia chinensis HOM05D006025 ORTHO05D008547 5.4e-57 225.7 213 54.9
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 5.4e-57 225.7 198 56.6
AUR62026262 Chenopodium quinoa HOM05D006025 ORTHO05D008547 5.4e-57 225.7 204 54.9
AT2G02590 Arabidopsis thaliana HOM05D006025 ORTHO05D008547 7.1e-57 225.3 194 58.2
CAN.G27.7 Capsicum annuum HOM05D006025 ORTHO05D008547 9.3e-57 224.9 225 52.4
SMO147G0037 Selaginella moellendorffii HOM05D006025 ORTHO05D008547 9.3e-57 224.9 206 57.3
AL5G11850 Arabidopsis lyrata HOM05D006025 ORTHO05D008547 1.2e-56 224.6 194 58.2
BolC7t43841H Brassica oleracea HOM05D006025 ORTHO05D008547 2.7e-56 223.4 194 57.7
COL.COLO4_36182 Corchorus olitorius HOM05D006025 ORTHO05D008547 2.7e-56 223.4 205 57.1
FAN22G0508 Fragaria x ananassa HOM05D006025 ORTHO05D008547 3.5e-56 223.0 206 53.4
Sc11g0001660 Simmondsia chinensis HOM05D006025 ORTHO05D008547 4.6e-56 222.6 206 55.3
THA.LOC104805137 Tarenaya hassleriana HOM05D000131 ORTHO05D000086 4.6e-56 222.6 198 54.5
Ciclev10032129m.g Citrus clementina HOM05D006025 ORTHO05D008547 6.0e-56 222.2 205 54.1
FvH4_4g32070 Fragaria vesca HOM05D006025 ORTHO05D008547 6.0e-56 222.2 206 53.4
BcaC06g34048 Brassica carinata HOM05D006025 ORTHO05D008547 7.9e-56 221.9 194 57.2
C07p33300 Brassica napus HOM05D006025 ORTHO05D008547 7.9e-56 221.9 194 57.2
Rhsim12G0129700 Rhododendron simsii HOM05D006025 ORTHO05D008547 7.9e-56 221.9 206 56.3
arahy.Tifrunner.gnm1.ann1.1ZL8TB Arachis hypogaea HOM05D006025 ORTHO05D008547 1.0e-55 221.5 202 55.4
arahy.Tifrunner.gnm1.ann1.V5YJYF Arachis hypogaea HOM05D006025 ORTHO05D008547 1.0e-55 221.5 202 55.4
Carub.0005s0158 Capsella rubella HOM05D006025 ORTHO05D008547 1.0e-55 221.5 194 57.2
Os03g0800500 Oryza sativa ssp. japonica HOM05D006025 ORTHO05D008547 1.0e-55 221.5 219 53.0
Sed0022227 Sechium edule HOM05D006025 ORTHO05D008547 1.0e-55 221.5 198 55.6
BcaC06g31223 Brassica carinata HOM05D006025 ORTHO05D008547 1.3e-55 221.1 250 49.2
FAN12G1990 Fragaria x ananassa HOM05D006025 ORTHO05D008547 1.3e-55 221.1 200 55.0
PGR119G0173 Punica granatum HOM05D006025 ORTHO05D008547 1.3e-55 221.1 202 55.9
SEGI_16485 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 1.3e-55 221.1 222 51.4
FAN07G0827 Fragaria x ananassa HOM05D006025 ORTHO05D008547 1.7e-55 220.7 205 54.1
Thecc.02G232800 Theobroma cacao HOM05D006025 ORTHO05D008547 1.7e-55 220.7 210 53.8
A09p23920 Brassica napus HOM05D006025 ORTHO05D008547 2.3e-55 220.3 194 57.2
Dinv34195 Davidia involucrata HOM05D006025 ORTHO05D008547 2.3e-55 220.3 205 54.1
MD13G1079600 Malus domestica HOM05D006025 ORTHO05D008547 2.3e-55 220.3 199 54.8
BolC9t55941H Brassica oleracea HOM05D006025 ORTHO05D008547 3.0e-55 219.9 194 57.2
Glyma.01G040500 Glycine max HOM05D006025 ORTHO05D008547 3.0e-55 219.9 204 53.9
Gohir.D05G323300 Gossypium hirsutum HOM05D006025 ORTHO05D008547 3.0e-55 219.9 290 45.5
RcHm_v2.0_Chr4g0440761 Rosa chinensis HOM05D006025 ORTHO05D008547 3.0e-55 219.9 205 54.1
MELO3C012062.2 Cucumis melo HOM05D006025 ORTHO05D008547 3.9e-55 219.5 198 55.1
BraA09t37996Z Brassica rapa HOM05D006025 ORTHO05D008547 5.1e-55 219.2 194 56.7
Cfa009042 Carpinus fangiana HOM05D006025 ORTHO05D008547 5.1e-55 219.2 323 43.7
Sabra10G0030400 Salix brachista HOM05D006025 ORTHO05D008547 5.1e-55 219.2 198 55.1
ATR0665G167 Amborella trichopoda HOM05D006025 ORTHO05D008547 6.6e-55 218.8 229 51.1
CiPaw.05G140400 Carya illinoinensis HOM05D006025 ORTHO05D008547 6.6e-55 218.8 202 54.5
MD16G1079500 Malus domestica HOM05D006025 ORTHO05D008547 6.6e-55 218.8 202 54.0
QL03p065944 Quercus lobata HOM05D006025 ORTHO05D008547 6.6e-55 218.8 198 56.1
ECA246G2177 Erigeron canadensis HOM05D006025 ORTHO05D008547 8.7e-55 218.4 227 50.7
Migut.E00118 Erythranthe guttata HOM05D006025 ORTHO05D008547 8.7e-55 218.4 201 54.2
Gorai.009G347000 Gossypium raimondii HOM05D006025 ORTHO05D008547 1.1e-54 218.0 290 44.8
HanXRQChr15g0478181 Helianthus annuus HOM05D006025 ORTHO05D008547 1.1e-54 218.0 268 46.6
Lj6A795T74 Lonicera japonica HOM05D006025 ORTHO05D008547 1.1e-54 218.0 220 51.8
Lj2g0002167 Lotus japonicus HOM05D006025 ORTHO05D008547 1.1e-54 218.0 205 53.2
TPR.G26717 Trifolium pratense HOM05D006025 ORTHO05D008547 1.1e-54 218.0 205 54.1
HanXRQChr17g0544581 Helianthus annuus HOM05D006025 ORTHO05D008547 1.5e-54 217.6 201 54.2
VMungo1215G1908 Vigna mungo HOM05D006025 ORTHO05D008547 1.5e-54 217.6 198 54.5
GSVIVG01020079001 Vitis vinifera HOM05D006025 ORTHO05D008547 1.5e-54 217.6 205 54.1
MBI04_g22196_MAGBIO Magnolia biondii HOM05D006025 ORTHO05D008547 1.9e-54 217.2 195 55.4
Medtr5g037600 Medicago truncatula HOM05D006025 ORTHO05D008547 1.9e-54 217.2 209 53.1
Sp2g13810 Schrenkiella parvula HOM05D006025 ORTHO05D008547 1.9e-54 217.2 194 56.7
A06p43550 Brassica napus HOM05D006025 ORTHO05D008547 2.5e-54 216.9 198 55.1
BraA06t27240Z Brassica rapa HOM05D006025 ORTHO05D008547 2.5e-54 216.9 198 55.1
CBR_g39595 Chara braunii HOM05D006025 ORTHO05D008547 2.5e-54 216.9 200 55.0
Atru.chr11.1861 Acer truncatum HOM05D006025 ORTHO05D008547 3.3e-54 216.5 212 53.3
CsaV3_5G032300 Cucumis sativus L. HOM05D006025 ORTHO05D008547 3.3e-54 216.5 254 47.2
C09p30780 Brassica napus HOM05D006025 ORTHO05D008547 4.3e-54 216.1 194 56.7
Thhalv10004613m.g Eutrema salsugineum HOM05D006025 ORTHO05D008547 4.3e-54 216.1 194 56.2
Potri.010G034400 Populus trichocarpa HOM05D006025 ORTHO05D008547 4.3e-54 216.1 197 54.8
Lsat_1_v5_gn_3_49700 Lactuca sativa HOM05D006025 ORTHO05D008547 5.6e-54 215.7 202 54.5
Phvul.002G080900 Phaseolus vulgaris HOM05D006025 ORTHO05D008547 7.3e-54 215.3 198 55.1
Gohir.A05G321100 Gossypium hirsutum HOM05D006025 ORTHO05D008547 9.6e-54 214.9 298 43.6
BcaC04g21520 Brassica carinata HOM05D006025 ORTHO05D008547 1.3e-53 214.5 194 56.2
TWI18G0579 Tripterygium wilfordii HOM05D006025 ORTHO05D008547 1.3e-53 214.5 198 54.5
Migut.L01348 Erythranthe guttata HOM05D006025 ORTHO05D008547 1.6e-53 214.2 217 52.1
ClCG05G024630 Citrullus lanatus HOM05D006025 ORTHO05D008547 2.1e-53 213.8 253 47.0
Ca_04692_v3 Cicer arietinum L. HOM05D006025 ORTHO05D008547 2.8e-53 213.4 210 53.3
CSS0050443 Camellia sinensis var. sinensis HOM05D006025 ORTHO05D008547 6.2e-53 212.2 195 53.8
Sopen05g002930 Solanum pennellii HOM05D006025 ORTHO05D008547 1.1e-52 211.5 226 51.8
Lalb_Chr05g0217521 Lupinus albus HOM05D006025 ORTHO05D008547 1.8e-52 210.7 194 54.6
Aa31LG2G7560 Aethionema arabicum HOM05D006025 ORTHO05D008547 2.4e-52 210.3 201 54.7
Duzib268G1145 Durio zibethinus HOM05D006025 ORTHO05D008547 6.9e-52 208.8 187 56.1
Nn4g23031 Nelumbo nucifera HOM05D006025 ORTHO05D008547 1.2e-51 208.0 263 44.5
Psat2g115440 Pisum sativum HOM05D006025 ORTHO05D008547 1.2e-51 208.0 213 51.2
AUR62026454 Chenopodium quinoa HOM05D006025 ORTHO05D008547 2.6e-51 206.8 204 52.9
SalBow8G3437 Salvia bowleyana HOM05D006025 ORTHO05D008547 3.4e-51 206.5 220 50.9
Aqoxy3G00786 Aquilegia oxysepala HOM05D006025 ORTHO05D008547 4.5e-51 206.1 219 51.1
Cpa.g.sc73.14 Carica papaya HOM05D006025 ORTHO05D008547 1.3e-50 204.5 201 52.2
PGSC0003DMG400017619 Solanum tuberosum HOM05D006025 ORTHO05D008547 1.3e-50 204.5 223 50.7
Cc11_g13550 Coffea canephora HOM05D006025 ORTHO05D008547 4.9e-50 202.6 220 49.1
unitig_62.g23684 Utricularia gibba HOM05D006025 ORTHO05D008547 4.9e-50 202.6 273 42.9
Oeu044566.1 Olea europaea HOM05D006025 ORTHO05D008547 1.1e-49 201.4 197 52.8
Nitab4.5_0002969g0040 Nicotiana tabacum HOM05D006025 ORTHO05D008547 1.9e-49 200.7 225 48.9
MSTRG.7831 Avicennia marina HOM05D006025 ORTHO05D008547 2.4e-49 200.3 214 51.9
BcaB07g30697 Brassica carinata HOM05D006025 ORTHO05D008547 3.2e-49 199.9 175 57.1
vmacro16324 Vaccinium macrocarpon HOM05D006025 ORTHO05D008547 5.4e-49 199.1 254 44.9
CARHR145110 Cardamine hirsuta HOM05D006025 ORTHO05D008547 1.2e-48 198.0 277 43.7
Eucgr.B02589 Eucalyptus grandis HOM05D006025 ORTHO05D008547 3.0e-47 193.4 173 57.8
Peaxi162Scf00209g00517 Petunia axillaris HOM05D006025 ORTHO05D008547 1.1e-46 191.4 223 48.9
SalBow2G1916 Salvia bowleyana HOM05D006025 ORTHO05D008547 1.9e-46 190.7 221 47.5
Haze_12072 Corylus avellana HOM05D006025 ORTHO05D008547 2.5e-46 190.3 295 43.4
Zm00001eb212770 Zea mays HOM05D006025 ORTHO05D008547 1.3e-45 188.0 196 48.5
SGA_v2.0_scaffold87G26972 Striga asiatica HOM05D006025 ORTHO05D008547 1.9e-41 174.1 198 47.5
CDE07G0470 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 5.5e-41 172.6 147 60.5
HPP92_018837 Vanilla planifolia HOM05D006025 ORTHO05D008547 8.7e-39 165.2 142 55.6
SEGI_34054 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 3.9e-23 113.2 109 51.4
CDE06G2488 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 3.7e-21 106.7 175 41.1
Solyc05g006965.1 Solanum lycopersicum HOM05D006025 ORTHO05D008547 2.3e-15 87.4 178 34.3
Glyma.02G024100 Glycine max HOM05D006025 ORTHO05D008547 2.6e-14 84.0 86 53.5
Hma1.2p1_0808F.1_g221580 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 9.4e-09 65.5 67 52.2
Hma1.2p1_0513F.1_g169540 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 4.7e-08 63.2 67 50.7


User provided reference genes

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