Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c22_20610 Physcomitrium patens HOM05D000823 ORTHO05D311526 0.0e+00 1708.0 833 100.0
Pp3c7_12680 Physcomitrium patens HOM05D000838 ORTHO05D000656 2.3e-13 82.0 151 37.1
Pp3c1_15410 Physcomitrium patens HOM05D000838 ORTHO05D000088 9.8e-12 76.6 157 35.7
Pp3c17_12880 Physcomitrium patens HOM05D027854 ORTHO05D000088 1.1e-10 73.2 143 29.4
SEGI_17863 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 1.0e-08 66.6 129 36.4
SEGI_06639 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 5.0e-08 64.3 133 35.3
Pp3c17_16170 Physcomitrium patens HOM05D000823 ORTHO05D000088 1.1e-07 63.2 161 29.2
Pp3c17_1930 Physcomitrium patens HOM05D017831 ORTHO05D000088 1.1e-07 63.2 150 30.7
Pp3c19_19230 Physcomitrium patens HOM05D000838 ORTHO05D000656 1.5e-07 62.8 137 33.6
Nn6g32138 Nelumbo nucifera HOM05D000823 ORTHO05D000088 1.9e-07 62.4 132 33.3
Sed0012430 Sechium edule HOM05D000395 ORTHO05D000088 1.9e-07 62.4 121 32.2
SEGI_18580 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 2.5e-07 62.0 167 26.3
ATR1120G190 Amborella trichopoda HOM05D000823 ORTHO05D000088 3.3e-07 61.6 130 36.2
Lj7A17T43 Lonicera japonica HOM05D000395 ORTHO05D000088 3.3e-07 61.6 164 31.1
Potri.004G147000 Populus trichocarpa HOM05D000395 ORTHO05D000088 3.3e-07 61.6 150 32.7
Sabra04G0084800 Salix brachista HOM05D000395 ORTHO05D000088 4.3e-07 61.2 175 29.1
Rhsim06G0040900 Rhododendron simsii HOM05D000823 ORTHO05D000088 9.5e-07 60.1 175 30.3
Os01g0723500 Oryza sativa ssp. japonica HOM05D000823 ORTHO05D000088 1.2e-06 59.7 130 34.6
Pp3c14_21500 Physcomitrium patens HOM05D000838 ORTHO05D000656 1.2e-06 59.7 128 30.5
TAR628G1113 Trochodendron aralioides HOM05D000395 ORTHO05D000088 1.2e-06 59.7 129 34.1
Actinidia22588 Actinidia chinensis HOM05D000823 ORTHO05D000088 1.6e-06 59.3 135 36.3
Sabra04G0097200 Salix brachista HOM05D000395 ORTHO05D000088 1.6e-06 59.3 154 32.5
ATR1132G056 Amborella trichopoda HOM05D000823 ORTHO05D000088 2.8e-06 58.5 129 31.8
Aqoxy6G00282 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 2.8e-06 58.5 137 32.8
QL11p039193 Quercus lobata HOM05D000395 ORTHO05D000088 3.6e-06 58.2 174 29.3
FvH4_7g02010 Fragaria vesca HOM05D000395 ORTHO05D000088 4.7e-06 57.8 107 34.6
FAN06G4020 Fragaria x ananassa HOM05D000395 ORTHO05D000088 4.7e-06 57.8 107 34.6
Gohir.A03G116300 Gossypium hirsutum HOM05D000823 ORTHO05D000088 6.1e-06 57.4 142 28.2


User provided reference genes

Program Settings