Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c22_17807 Physcomitrium patens HOM05D001081 ORTHO05D004708 9.9e-138 493.4 245 100.0
ATR0602G075 Amborella trichopoda HOM05D001081 ORTHO05D004708 6.8e-30 135.2 192 39.6
Mapoly0076s0015 Marchantia polymorpha HOM05D001081 ORTHO05D004708 3.9e-25 119.4 183 37.2
Thecc.03G199500 Theobroma cacao HOM05D001081 ORTHO05D004708 3.9e-25 119.4 233 34.8
SMO213G0001 Selaginella moellendorffii HOM05D001081 ORTHO05D004708 5.1e-25 119.0 180 40.6
FvH4_7g31550 Fragaria vesca HOM05D001081 ORTHO05D004708 1.9e-24 117.1 180 36.7
AagrBONN_evm.TU.Sc2ySwM_117.3719 Anthoceros agrestis HOM05D001081 ORTHO05D004708 3.3e-24 116.3 219 36.1
Ciclev10018477m.g Citrus clementina HOM05D001081 ORTHO05D004708 7.3e-24 115.2 133 44.4
Eucgr.G00143 Eucalyptus grandis HOM05D001081 ORTHO05D004708 9.5e-24 114.8 149 43.0
RcHm_v2.0_Chr1g0380531 Rosa chinensis HOM05D001081 ORTHO05D004708 9.5e-24 114.8 177 36.2
Cc02_g01510 Coffea canephora HOM05D001081 ORTHO05D004708 1.2e-23 114.4 195 37.4
HanXRQChr08g0225301 Helianthus annuus HOM05D001081 ORTHO05D004708 1.2e-23 114.4 178 39.9
Medtr1g008050 Medicago truncatula HOM05D001081 ORTHO05D004708 1.2e-23 114.4 221 32.6
Aqoxy3G00072 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 2.8e-23 113.2 175 34.9
AUR62019407 Chenopodium quinoa HOM05D001081 ORTHO05D004708 3.6e-23 112.8 201 33.8
PSO170G6091 Papaver somniferum HOM05D001081 ORTHO05D004708 3.6e-23 112.8 201 35.8
Lj1C1020T7 Lonicera japonica HOM05D001081 ORTHO05D004708 4.7e-23 112.5 184 37.5
AagrBONN_evm.TU.Sc2ySwM_228.1615 Anthoceros agrestis HOM05D001081 ORTHO05D004708 6.2e-23 112.1 213 35.7
Lsat_1_v5_gn_8_5261 Lactuca sativa HOM05D001081 ORTHO05D004708 8.1e-23 111.7 198 35.9
Gohir.A11G015200 Gossypium hirsutum HOM05D001081 ORTHO05D004708 1.4e-22 110.9 193 35.8
CAN.G481.14 Capsicum annuum HOM05D001081 ORTHO05D004708 2.4e-22 110.2 190 39.5
C07p43530 Brassica napus HOM05D001081 ORTHO05D004708 3.1e-22 109.8 180 36.7
BolC7t44880H Brassica oleracea HOM05D001081 ORTHO05D004708 3.1e-22 109.8 180 36.7
A06p35020 Brassica napus HOM05D001081 ORTHO05D004708 4.0e-22 109.4 180 36.1
PSO063G4550 Papaver somniferum HOM05D001081 ORTHO05D004708 4.0e-22 109.4 212 33.5
Prupe.2G309600 Prunus persica HOM05D001081 ORTHO05D004708 4.0e-22 109.4 178 37.1
Dinv35339 Davidia involucrata HOM05D001081 ORTHO05D004708 6.8e-22 108.6 178 37.6
EL10Ac3g05278 Beta vulgaris HOM05D001081 ORTHO05D004708 8.9e-22 108.2 186 35.5
Ca_12791_v3 Cicer arietinum L. HOM05D001081 ORTHO05D004708 8.9e-22 108.2 198 36.4
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 8.9e-22 108.2 182 38.5
QL09p008772 Quercus lobata HOM05D001081 ORTHO05D004708 8.9e-22 108.2 153 40.5
Cfa016233 Carpinus fangiana HOM05D001081 ORTHO05D004708 1.2e-21 107.8 181 39.2
CSS0032097 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D004708 1.5e-21 107.5 185 38.9
Mapoly0111s0028 Marchantia polymorpha HOM05D001081 ORTHO05D004708 1.5e-21 107.5 180 38.3
Sopen03g022900 Solanum pennellii HOM05D001081 ORTHO05D004708 1.5e-21 107.5 198 35.4
vmacro06386 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 2.0e-21 107.1 225 33.3
Gorai.007G015700 Gossypium raimondii HOM05D001081 ORTHO05D004708 2.6e-21 106.7 193 34.7
Nitab4.5_0006933g0040 Nicotiana tabacum HOM05D001081 ORTHO05D004708 2.6e-21 106.7 181 38.1
Gohir.D11G015300 Gossypium hirsutum HOM05D001081 ORTHO05D004708 3.4e-21 106.3 193 34.7
THA.LOC104798901 Tarenaya hassleriana HOM05D001081 ORTHO05D004708 3.4e-21 106.3 208 30.3
CANSAT21G1825 Cannabis sativa HOM05D001081 ORTHO05D004708 7.6e-21 105.1 185 33.0
Eucgr.G00092 Eucalyptus grandis HOM05D001081 ORTHO05D004708 7.6e-21 105.1 145 42.1
Eucgr.G00111 Eucalyptus grandis HOM05D001081 ORTHO05D004708 1.3e-20 104.4 139 43.2
Medtr1g007950 Medicago truncatula HOM05D001081 ORTHO05D004708 1.3e-20 104.4 202 31.2
Manes.01G183500 Manihot esculenta HOM05D001081 ORTHO05D004708 1.7e-20 104.0 181 37.0
Nn1g00260 Nelumbo nucifera HOM05D001081 ORTHO05D004708 1.7e-20 104.0 204 30.4
TPR.G12082 Trifolium pratense HOM05D001081 ORTHO05D004708 2.2e-20 103.6 193 33.7
MBI06_g13415_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D004708 2.9e-20 103.2 189 32.8
Thhalv10003513m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 3.8e-20 102.8 180 33.3
MD07G1288100 Malus domestica HOM05D001081 ORTHO05D004708 4.9e-20 102.4 134 44.0
RcHm_v2.0_Chr1g0381531 Rosa chinensis HOM05D001081 ORTHO05D004708 4.9e-20 102.4 177 32.8
Atru.chr12.2203 Acer truncatum HOM05D001081 ORTHO05D004708 6.4e-20 102.1 178 36.5
Glyma.17G128700 Glycine max HOM05D001081 ORTHO05D004708 6.4e-20 102.1 194 32.5
GSVIVG01038555001 Vitis vinifera HOM05D001081 ORTHO05D004708 6.4e-20 102.1 181 34.3
Eucgr.H05016 Eucalyptus grandis HOM05D001081 ORTHO05D004708 1.1e-19 101.3 149 40.3
BcaNung01219 Brassica carinata HOM05D001081 ORTHO05D004708 1.4e-19 100.9 105 46.7
C07p43490 Brassica napus HOM05D001081 ORTHO05D004708 1.4e-19 100.9 105 46.7
BolC7t44875H Brassica oleracea HOM05D001081 ORTHO05D004708 1.4e-19 100.9 105 46.7
CANSAT21G0069 Cannabis sativa HOM05D001081 ORTHO05D004708 1.4e-19 100.9 98 46.9
CANSAT21G2573 Cannabis sativa HOM05D001081 ORTHO05D004708 1.9e-19 100.5 98 46.9
Hma1.2p1_0404F.1_g145340 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 1.9e-19 100.5 213 33.8
Carub.0006s2205 Capsella rubella HOM05D001081 ORTHO05D004708 2.4e-19 100.1 92 50.0
AT5G24280 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 3.2e-19 99.8 200 32.5
BraA06t26428Z Brassica rapa HOM05D001081 ORTHO05D004708 3.2e-19 99.8 92 48.9
Hma1.2p1_0404F.1_g145380 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 3.2e-19 99.8 183 36.1
AL6G35710 Arabidopsis lyrata HOM05D001081 ORTHO05D004708 4.1e-19 99.4 92 50.0
vmacro22638 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 4.1e-19 99.4 139 41.0
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 7.1e-19 98.6 206 31.6
Nitab4.5_0000548g0110 Nicotiana tabacum HOM05D001081 ORTHO05D004708 7.1e-19 98.6 76 57.9
HanXRQChr08g0225341 Helianthus annuus HOM05D001081 ORTHO05D004708 9.2e-19 98.2 182 34.1
Psat6g034720 Pisum sativum HOM05D001081 ORTHO05D004708 2.1e-18 97.1 122 38.5
CARHR189220 Cardamine hirsuta HOM05D001081 ORTHO05D004708 3.5e-18 96.3 182 34.6
Sabra15G0067900 Salix brachista HOM05D001081 ORTHO05D004708 4.6e-18 95.9 133 36.8
Sabra15G0068100 Salix brachista HOM05D001081 ORTHO05D004708 4.6e-18 95.9 133 36.8
TWI39G0245 Tripterygium wilfordii HOM05D001081 ORTHO05D004708 6.0e-18 95.5 95 47.4
BcaNung01806 Brassica carinata HOM05D001081 ORTHO05D004708 7.8e-18 95.1 170 34.7
Lj4g0008522 Lotus japonicus HOM05D001081 ORTHO05D004708 7.8e-18 95.1 197 32.5
Aa31LG11G3510 Aethionema arabicum HOM05D001081 ORTHO05D004708 1.0e-17 94.7 76 57.9
Thhalv10003512m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 1.3e-17 94.4 95 48.4
SEGI_15117 Sequoiadendron giganteum HOM05D001081 ORTHO05D004708 1.7e-17 94.0 155 37.4
FAN01G0187 Fragaria x ananassa HOM05D001081 ORTHO05D004708 2.3e-17 93.6 87 50.6
PSO781G0289 Papaver somniferum HOM05D001081 ORTHO05D004708 2.3e-17 93.6 212 29.2
AUR62006087 Chenopodium quinoa HOM05D001081 ORTHO05D004708 3.0e-17 93.2 87 47.1
BraA06t26425Z Brassica rapa HOM05D001081 ORTHO05D004708 5.1e-17 92.4 75 54.7
Ah.07g205570 Amaranthus hybridus HOM05D001081 ORTHO05D004708 1.1e-16 91.3 202 28.7
CiPaw.06G046000 Carya illinoinensis HOM05D001081 ORTHO05D004708 1.1e-16 91.3 81 53.1
FvH4_7g31511 Fragaria vesca HOM05D001081 ORTHO05D004708 1.9e-16 90.5 166 33.7
CARHR189240 Cardamine hirsuta HOM05D001081 ORTHO05D004708 2.5e-16 90.1 183 34.4
TAR375G0280 Trochodendron aralioides HOM05D001081 ORTHO05D004708 2.5e-16 90.1 76 55.3
Lalb_Chr10g0091361 Lupinus albus HOM05D001081 ORTHO05D004708 2.1e-15 87.0 87 46.0
FAN06G1778 Fragaria x ananassa HOM05D001081 ORTHO05D004708 2.8e-15 86.7 75 53.3
FAN06G3553 Fragaria x ananassa HOM05D001081 ORTHO05D004708 2.8e-15 86.7 75 53.3
HanXRQChr10g0291811 Helianthus annuus HOM05D001081 ORTHO05D004708 2.8e-15 86.7 75 57.3
SGA_v2.0_scaffold192G40538 Striga asiatica HOM05D001081 ORTHO05D004708 2.8e-15 86.7 187 33.2
A06p35070 Brassica napus HOM05D001081 ORTHO05D004708 4.7e-15 85.9 117 38.5
SalBow4G1120 Salvia bowleyana HOM05D001081 ORTHO05D004708 6.9e-14 82.0 78 50.0
Cpa.g.sc3.91 Carica papaya HOM05D001081 ORTHO05D004708 7.6e-13 78.6 133 36.1
SGA_v2.0_scaffold9G04846 Striga asiatica HOM05D001081 ORTHO05D004708 1.1e-11 74.7 112 37.5
Actinidia04725 Actinidia chinensis HOM05D001081 ORTHO05D004708 2.4e-11 73.6 71 47.9
Rhsim03G0209100 Rhododendron simsii HOM05D001081 ORTHO05D004708 2.1e-10 70.5 235 26.8
Actinidia27675 Actinidia chinensis HOM05D001081 ORTHO05D004708 2.7e-10 70.1 79 44.3
Lj1C1018T17 Lonicera japonica HOM05D001081 ORTHO05D004708 1.0e-09 68.2 184 27.7
Peaxi162Scf00740g00140 Petunia axillaris HOM05D001081 ORTHO05D024756 1.3e-09 67.8 153 30.7
Hund21007 Selenicereus undatus HOM05D001081 ORTHO05D004708 3.0e-09 66.6 177 26.0
HanXRQChr08g0225291 Helianthus annuus HOM05D001081 ORTHO05D004708 6.6e-09 65.5 183 30.1
DCAR_008928 Daucus carota HOM05D001081 ORTHO05D004708 4.3e-08 62.8 150 32.0
Carub.0006s2203 Capsella rubella HOM05D001081 ORTHO05D004708 5.6e-08 62.4 47 61.7
Actinidia04689 Actinidia chinensis HOM05D001081 ORTHO05D004708 9.6e-08 61.6 57 54.4
Aqoxy4G01594 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 1.8e-06 57.4 96 38.5


User provided reference genes

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