Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 3.4e-107 391.7 203 100.0
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 5.4e-57 224.9 187 70.6
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 1.3e-26 124.0 88 64.8
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 3.8e-26 122.5 86 64.0
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 8.4e-26 121.3 88 64.8
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 3.2e-25 119.4 88 62.5
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 4.2e-25 119.0 86 65.1
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 5.5e-25 118.6 114 56.1
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 9.3e-25 117.9 88 62.5
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 9.3e-25 117.9 82 67.1
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.6e-24 117.1 113 56.6
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 6.1e-24 115.2 139 46.0
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 1.0e-23 114.4 84 63.1
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 1.3e-23 114.0 88 61.4
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 1.8e-23 113.6 137 48.9
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 2.3e-23 113.2 83 62.7
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.3e-23 113.2 84 61.9
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 2.3e-23 113.2 88 61.4
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 2.3e-23 113.2 145 46.2
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 3.0e-23 112.8 88 59.1
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 3.0e-23 112.8 133 46.6
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 3.9e-23 112.5 113 52.2
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 3.9e-23 112.5 84 63.1
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 5.1e-23 112.1 93 55.9
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 5.1e-23 112.1 140 46.4
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 5.1e-23 112.1 85 63.5
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 6.7e-23 111.7 84 61.9
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 6.7e-23 111.7 86 61.6
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 8.7e-23 111.3 86 60.5
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 8.7e-23 111.3 134 47.0
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 8.7e-23 111.3 86 60.5
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 1.1e-22 110.9 88 56.8
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.1e-22 110.9 143 46.9
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 1.1e-22 110.9 139 47.5
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.5e-22 110.5 113 50.4
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 1.5e-22 110.5 88 59.1
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.9e-22 110.2 85 62.4
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 1.9e-22 110.2 141 46.1
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 1.9e-22 110.2 86 60.5
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 2.5e-22 109.8 155 43.9
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 2.5e-22 109.8 86 58.1
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 5.7e-22 108.6 86 58.1
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 5.7e-22 108.6 144 45.1
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 7.4e-22 108.2 88 56.8
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 7.4e-22 108.2 151 45.0
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 9.7e-22 107.8 133 45.9
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 9.7e-22 107.8 169 45.6
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 9.7e-22 107.8 144 43.8
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 9.7e-22 107.8 136 47.1
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 9.7e-22 107.8 145 45.5
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 1.3e-21 107.5 163 42.3
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.3e-21 107.5 84 59.5
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 1.6e-21 107.1 113 50.4
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.6e-21 107.1 151 44.4
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 2.2e-21 106.7 86 57.0
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 2.2e-21 106.7 86 57.0
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 2.2e-21 106.7 155 41.3
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 2.2e-21 106.7 144 44.4
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 2.2e-21 106.7 86 58.1
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 2.2e-21 106.7 134 47.0
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 2.8e-21 106.3 141 43.3
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 2.8e-21 106.3 144 43.8
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 2.8e-21 106.3 88 60.2
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 3.7e-21 105.9 142 44.4
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 4.8e-21 105.5 86 58.1
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 4.8e-21 105.5 88 55.7
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 6.3e-21 105.1 137 47.4
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 6.3e-21 105.1 86 58.1
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 6.3e-21 105.1 142 45.8
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 8.2e-21 104.8 86 58.1
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 8.2e-21 104.8 134 44.8
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 8.2e-21 104.8 151 42.4
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 8.2e-21 104.8 86 57.0
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 1.1e-20 104.4 88 55.7
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 1.1e-20 104.4 89 56.2
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 1.1e-20 104.4 146 43.2
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 1.4e-20 104.0 88 55.7
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 1.8e-20 103.6 86 59.3
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 1.8e-20 103.6 85 57.6
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 2.4e-20 103.2 86 55.8
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.1e-20 102.4 142 45.1
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 5.3e-20 102.1 86 57.0
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 5.3e-20 102.1 86 57.0
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 6.9e-20 101.7 86 55.8
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 9.0e-20 101.3 87 57.5
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 9.0e-20 101.3 86 55.8
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 9.0e-20 101.3 127 44.1
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 1.2e-19 100.9 134 43.3
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.5e-19 100.5 143 44.8
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 2.6e-19 99.8 109 47.7
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 4.5e-19 99.0 86 55.8
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 4.5e-19 99.0 163 42.3
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 7.7e-19 98.2 149 41.6
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 1.0e-18 97.8 134 44.0
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.3e-18 97.4 139 42.4
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 1.3e-18 97.4 68 67.6
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 5.0e-18 95.5 93 52.7
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 8.5e-18 94.7 168 40.5
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 1.4e-17 94.0 109 45.9
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 1.4e-17 94.0 87 54.0
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.4e-17 94.0 154 38.3
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 7.2e-17 91.7 155 38.1
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 9.4e-17 91.3 161 41.6
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 1.2e-16 90.9 161 39.8
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 1.2e-16 90.9 147 38.8
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 1.6e-16 90.5 77 57.1
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 1.6e-16 90.5 83 55.4
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 2.7e-16 89.7 163 40.5
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 3.9e-15 85.9 60 63.3
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 1.5e-14 84.0 70 55.7
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 2.4e-12 76.6 67 52.2
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 5.3e-12 75.5 59 59.3
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 6.9e-12 75.1 63 55.6
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 2.2e-10 70.1 127 33.9


User provided reference genes

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