Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c22_15400 Physcomitrium patens HOM05D008207 ORTHO05D010373 0.0e+00 1280.4 669 100.0
MBI14_g19451_MAGBIO Magnolia biondii HOM05D008207 ORTHO05D010373 1.0e-120 438.3 522 46.9
ATR0580G068 Amborella trichopoda HOM05D008207 ORTHO05D010373 2.5e-119 433.7 441 51.7
Mapoly0010s0073 Marchantia polymorpha HOM05D008207 ORTHO05D010373 2.1e-118 430.6 444 50.9
TAR625G1057 Trochodendron aralioides HOM05D008207 ORTHO05D010373 8.2e-118 428.7 478 49.0
Dinv41210 Davidia involucrata HOM05D008207 ORTHO05D010373 1.2e-116 424.9 483 48.0
PSO170G1964 Papaver somniferum HOM05D008207 ORTHO05D010373 9.3e-106 388.7 446 47.5
CDE05G0633 Ceratophyllum demersum HOM05D008207 ORTHO05D010373 4.7e-89 333.2 393 45.3
GSVIVG01029258001 Vitis vinifera HOM05D008207 ORTHO05D010373 4.7e-89 333.2 287 57.5
Ca_21275_v3 Cicer arietinum L. HOM05D008207 ORTHO05D010373 6.7e-88 329.3 311 53.7
arahy.Tifrunner.gnm1.ann1.PC6R8Z Arachis hypogaea HOM05D008207 ORTHO05D010373 3.3e-87 327.0 289 55.7
VMungo1215G1326 Vigna mungo HOM05D008207 ORTHO05D010373 3.7e-86 323.6 301 53.2
Aqoxy7G02948 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 5.3e-85 319.7 243 62.1
Prupe.1G068900 Prunus persica HOM05D008207 ORTHO05D010373 7.0e-85 319.3 245 61.6
Glyma.13G103300 Glycine max HOM05D008207 ORTHO05D010373 9.1e-85 318.9 301 53.5
Medtr4g126910 Medicago truncatula HOM05D008207 ORTHO05D010373 2.6e-84 317.4 275 57.8
Phvul.003G137466 Phaseolus vulgaris HOM05D008207 ORTHO05D010373 2.6e-84 317.4 295 52.5
FAN17G2040 Fragaria x ananassa HOM05D008207 ORTHO05D010373 3.5e-84 317.0 278 55.4
arahy.Tifrunner.gnm1.ann1.7T8Q8E Arachis hypogaea HOM05D008207 ORTHO05D010373 4.5e-84 316.6 304 52.6
CSS0025795 Camellia sinensis var. sinensis HOM05D008207 ORTHO05D010373 1.0e-83 315.5 281 55.9
TPR.G5411 Trifolium pratense HOM05D008207 ORTHO05D010373 1.7e-83 314.7 280 55.7
Eucgr.C00072 Eucalyptus grandis HOM05D008207 ORTHO05D010373 3.8e-83 313.5 246 59.8
RcHm_v2.0_Chr4g0398551 Rosa chinensis HOM05D008207 ORTHO05D010373 3.8e-83 313.5 282 53.9
Hma1.2p1_0235F.1_g099000 Hydrangea macrophylla HOM05D008207 ORTHO05D010373 9.4e-82 308.9 243 60.9
CiPaw.07G200900 Carya illinoinensis HOM05D008207 ORTHO05D010373 1.2e-81 308.5 315 50.2
FAN22G1797 Fragaria x ananassa HOM05D008207 ORTHO05D010373 1.2e-79 302.0 304 51.0
AUR62033242 Chenopodium quinoa HOM05D008207 ORTHO05D010373 7.5e-79 299.3 251 58.6
Lj4g0004064 Lotus japonicus HOM05D008207 ORTHO05D010373 1.3e-78 298.5 284 55.3
Hund26321 Selenicereus undatus HOM05D008207 ORTHO05D010373 1.7e-78 298.1 290 53.4
Lalb_Chr12g0199751 Lupinus albus HOM05D008207 ORTHO05D010373 2.2e-78 297.7 297 53.5
MELO3C017404.2 Cucumis melo HOM05D008207 ORTHO05D010373 8.2e-78 295.8 283 53.7
DCAR_009922 Daucus carota HOM05D008207 ORTHO05D010373 8.2e-78 295.8 218 66.1
CsaV3_1G032120 Cucumis sativus L. HOM05D008207 ORTHO05D010373 2.4e-77 294.3 276 53.6
Sabra12G0024900 Salix brachista HOM05D008207 ORTHO05D010373 1.6e-76 291.6 353 45.9
Sed0019966 Sechium edule HOM05D008207 ORTHO05D010373 2.7e-76 290.8 285 52.3
FAN07G0484 Fragaria x ananassa HOM05D008207 ORTHO05D010373 1.0e-75 288.9 278 51.8
ClCG06G013910 Citrullus lanatus HOM05D008207 ORTHO05D010373 5.5e-74 283.1 264 55.7
Rhsim01G0002700 Rhododendron simsii HOM05D008207 ORTHO05D010373 5.2e-72 276.6 207 63.8
FAN12G1624 Fragaria x ananassa HOM05D008207 ORTHO05D000286 7.7e-68 262.7 316 46.2
Aqoxy5G03535 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 8.6e-67 259.2 220 58.6
AUR62021326 Chenopodium quinoa HOM05D008207 ORTHO05D010373 6.1e-65 253.1 256 51.6
vmacro13136 Vaccinium macrocarpon HOM05D008207 ORTHO05D010373 1.4e-64 251.9 296 47.0
Psat4g014640 Pisum sativum HOM05D008207 ORTHO05D010373 1.2e-60 238.8 228 53.5
EL10Ac8g18310 Beta vulgaris HOM05D008207 ORTHO05D010373 3.8e-59 233.8 220 54.5
SMO351G0474 Selaginella moellendorffii HOM05D008207 ORTHO05D010373 4.1e-53 213.8 282 46.8
SEGI_16784 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 3.1e-48 197.6 246 45.5
Haze_22076 Corylus avellana HOM05D008207 ORTHO05D010373 4.4e-47 193.7 215 48.4
FvH4_4g06651 Fragaria vesca HOM05D008207 ORTHO05D010373 1.3e-46 192.2 192 50.0
Os02g0462300 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 8.3e-46 189.5 249 43.8
MD16G1242100 Malus domestica HOM05D008207 ORTHO05D010373 1.1e-42 179.1 234 41.9
Eucgr.L03679 Eucalyptus grandis HOM05D008207 ORTHO05D010373 2.6e-39 167.9 161 52.2
Actinidia01309 Actinidia chinensis HOM05D008207 ORTHO05D010373 1.6e-36 158.7 109 66.1
Potri.012G036400 Populus trichocarpa HOM05D008207 ORTHO05D010373 2.4e-32 144.8 150 48.0
Os02g0462401 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 3.4e-31 141.0 205 42.4
MCO11G473 Micromonas commoda HOM05D008207 ORTHO05D010373 1.6e-25 122.1 291 32.6
MD16G1242000 Malus domestica HOM05D008207 ORTHO05D010373 3.4e-23 114.4 78 66.7
arahy.Tifrunner.gnm1.ann1.G9LR05 Arachis hypogaea HOM05D008207 ORTHO05D010373 1.3e-22 112.5 92 58.7
Glyma.16G118000 Glycine max HOM05D008207 ORTHO05D010373 1.3e-22 112.5 88 61.4
Actinidia01310 Actinidia chinensis HOM05D008207 ORTHO05D010373 1.1e-21 109.4 133 43.6
SEGI_04181 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 1.2e-20 105.9 82 64.6
SEGI_33506 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 1.3e-17 95.9 106 42.5
arahy.Tifrunner.gnm1.ann1.QBT4P1 Arachis hypogaea HOM05D008207 ORTHO05D010373 1.4e-16 92.4 99 50.5
Glyma.02G093251 Glycine max HOM05D008207 ORTHO05D010373 1.2e-15 89.4 68 61.8
Psat0s6286g0080 Pisum sativum HOM05D008207 ORTHO05D010373 2.0e-15 88.6 81 51.9
Haze_22075 Corylus avellana HOM05D008207 ORTHO05D010373 3.8e-14 84.3 55 63.6
Psat0s6286g0040 Pisum sativum HOM05D003133 ORTHO05D010373 6.9e-08 63.5 58 53.4


User provided reference genes

Program Settings