Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c22_14720 Physcomitrium patens HOM05D002002 ORTHO05D008797 0.0e+00 1862.8 1160 100.0
SEGI_37990 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 1.1e-32 146.7 735 28.8
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 9.1e-32 143.7 846 29.2
Mapoly0026s0020 Marchantia polymorpha HOM05D002002 ORTHO05D008797 4.2e-29 134.8 412 35.4
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 3.6e-28 131.7 629 31.0
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 1.7e-25 122.9 309 37.2
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 5.0e-22 111.3 645 29.0
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 1.9e-21 109.4 505 30.1
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 3.2e-21 108.6 737 27.5
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 2.1e-20 105.9 893 28.4
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 2.7e-20 105.5 541 30.9
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 3.6e-20 105.1 870 26.7
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 3.6e-20 105.1 509 30.3
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 8.0e-20 104.0 641 27.5
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 1.0e-19 103.6 773 26.4
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 3.0e-19 102.1 535 28.8
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 6.8e-19 100.9 668 27.7
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 6.8e-19 100.9 903 25.8
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 6.8e-19 100.9 649 29.0
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 2.6e-18 99.0 489 30.7
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 3.4e-18 98.6 489 30.7
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 3.4e-18 98.6 516 32.6
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 3.4e-18 98.6 656 29.0
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 4.4e-18 98.2 519 30.3
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 4.4e-18 98.2 428 30.8
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 1.7e-17 96.3 524 30.5
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 2.8e-17 95.5 799 27.7
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 3.7e-17 95.1 510 30.2
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 3.7e-17 95.1 610 26.9
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 3.7e-17 95.1 869 25.3
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 6.3e-17 94.4 501 28.5
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 6.3e-17 94.4 744 27.8
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 8.3e-17 94.0 881 25.4
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 1.1e-16 93.6 666 27.2
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 1.4e-16 93.2 276 35.5
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 1.4e-16 93.2 934 25.4
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 1.8e-16 92.8 632 27.4
unitig_26.g10348 Utricularia gibba HOM05D002002 ORTHO05D008797 1.8e-16 92.8 520 30.4
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 4.1e-16 91.7 884 25.1
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 5.3e-16 91.3 471 28.9
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 7.0e-16 90.9 484 27.3
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 1.2e-15 90.1 918 25.9
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 1.2e-15 90.1 901 24.9
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 1.2e-15 90.1 787 25.9
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 1.6e-15 89.7 922 27.5
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 2.0e-15 89.4 864 25.8
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 2.0e-15 89.4 452 27.4
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 4.5e-15 88.2 876 25.3
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 4.5e-15 88.2 529 28.2
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 5.9e-15 87.8 731 25.7
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 1.7e-14 86.3 360 31.1
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 2.9e-14 85.5 348 28.4
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 5.0e-14 84.7 252 36.5
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 5.0e-14 84.7 897 26.1
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 8.5e-14 84.0 883 26.7
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 1.1e-13 83.6 532 26.3
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 1.5e-13 83.2 770 26.4
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 1.5e-13 83.2 515 27.6
HPP92_005414 Vanilla planifolia HOM05D002002 ORTHO05D008797 1.5e-13 83.2 494 28.3
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 1.9e-13 82.8 646 26.6
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 4.2e-13 81.6 894 26.8
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 9.4e-13 80.5 675 26.2
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 2.1e-12 79.3 441 26.3
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 4.7e-12 78.2 648 26.1
AT1G70620 Arabidopsis thaliana HOM05D002002 ORTHO05D008797 8.0e-12 77.4 509 30.3
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 8.0e-12 77.4 533 27.6
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 1.0e-11 77.0 910 25.8
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 1.0e-11 77.0 747 26.9
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 3.0e-11 75.5 649 25.6
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 5.2e-11 74.7 725 24.4
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 8.8e-11 73.9 593 25.6
CARHR063850 Cardamine hirsuta HOM05D002002 ORTHO05D008797 1.2e-10 73.6 636 26.9
unitig_26.g10410 Utricularia gibba HOM05D002002 ORTHO05D008797 5.7e-10 71.2 175 33.7
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 7.5e-10 70.9 521 29.2
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 9.8e-10 70.5 726 26.0
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 4.8e-09 68.2 797 23.3
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 1.1e-08 67.0 849 25.0
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 2.4e-08 65.9 793 24.7
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 2.4e-08 65.9 905 24.0
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 7.0e-08 64.3 724 24.2
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 9.1e-08 63.9 887 23.4
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 1.6e-07 63.2 899 23.6
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 2.7e-07 62.4 862 25.2
BolC2t08843H Brassica oleracea HOM05D002002 ORTHO05D008797 5.9e-07 61.2 372 28.5
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 5.9e-07 61.2 515 27.4
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 1.7e-06 59.7 756 23.9
Zm00001eb067460 Zea mays HOM05D002002 ORTHO05D008797 1.7e-06 59.7 481 29.5
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 3.8e-06 58.5 861 25.1
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 5.0e-06 58.2 501 25.7
BcaC03g15213 Brassica carinata HOM05D002002 ORTHO05D008797 8.6e-06 57.4 372 28.2
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 8.6e-06 57.4 372 28.2
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 8.6e-06 57.4 516 29.1


User provided reference genes

Program Settings