Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 3.0e-85 318.5 167 100.0
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 2.6e-33 146.0 123 56.9
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 1.3e-27 127.1 120 53.3
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 2.6e-25 119.4 104 57.7
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 3.4e-25 119.0 146 43.8
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 4.5e-25 118.6 163 41.1
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 5.9e-25 118.2 138 46.4
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 5.9e-25 118.2 143 45.5
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 2.2e-24 116.3 163 40.5
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 2.9e-24 115.9 134 46.3
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 2.9e-24 115.9 121 47.9
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 2.9e-24 115.9 121 47.9
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 2.9e-24 115.9 134 46.3
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 2.9e-24 115.9 141 43.3
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 3.8e-24 115.5 129 48.1
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 3.8e-24 115.5 120 49.2
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 3.8e-24 115.5 120 49.2
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 5.0e-24 115.2 129 47.3
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 5.0e-24 115.2 162 40.1
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 6.5e-24 114.8 130 45.4
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 6.5e-24 114.8 157 40.1
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 6.5e-24 114.8 157 39.5
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 6.5e-24 114.8 157 39.5
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 8.5e-24 114.4 130 45.4
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 1.1e-23 114.0 129 47.3
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 1.1e-23 114.0 120 47.5
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 1.4e-23 113.6 131 43.5
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 1.9e-23 113.2 130 47.7
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 1.9e-23 113.2 140 45.7
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 1.9e-23 113.2 131 43.5
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 2.5e-23 112.8 135 45.9
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 3.2e-23 112.5 133 44.4
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 3.2e-23 112.5 120 47.5
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 5.5e-23 111.7 120 45.8
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 5.5e-23 111.7 163 38.0
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 7.2e-23 111.3 119 48.7
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 7.2e-23 111.3 156 39.1
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 7.2e-23 111.3 160 40.0
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 7.2e-23 111.3 133 45.9
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 7.2e-23 111.3 119 46.2
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 7.2e-23 111.3 129 45.7
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 9.4e-23 110.9 121 43.8
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 9.4e-23 110.9 130 45.4
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 9.4e-23 110.9 140 45.0
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 9.4e-23 110.9 119 47.9
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 1.2e-22 110.5 116 49.1
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 1.2e-22 110.5 129 45.0
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 1.2e-22 110.5 130 46.9
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 1.6e-22 110.2 130 45.4
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 1.6e-22 110.2 157 40.8
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 1.6e-22 110.2 118 47.5
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 1.6e-22 110.2 120 45.8
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 2.7e-22 109.4 119 47.9
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 2.7e-22 109.4 130 44.6
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 2.7e-22 109.4 164 37.2
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 3.6e-22 109.0 119 45.4
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 3.6e-22 109.0 130 46.2
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 3.6e-22 109.0 133 45.9
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 4.7e-22 108.6 146 41.1
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 4.7e-22 108.6 146 41.1
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 4.7e-22 108.6 146 41.1
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 4.7e-22 108.6 151 41.1
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 4.7e-22 108.6 167 38.3
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 4.7e-22 108.6 165 38.8
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 4.7e-22 108.6 136 41.2
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 6.1e-22 108.2 129 45.0
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 8.0e-22 107.8 165 38.8
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 8.0e-22 107.8 133 45.9
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 1.0e-21 107.5 123 45.5
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 1.0e-21 107.5 131 43.5
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.0e-21 107.5 147 40.8
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 1.8e-21 106.7 129 45.0
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 2.3e-21 106.3 128 43.8
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 2.3e-21 106.3 129 44.2
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 3.0e-21 105.9 140 42.1
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 3.0e-21 105.9 151 39.7
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 3.0e-21 105.9 151 39.7
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 3.0e-21 105.9 127 42.5
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 3.9e-21 105.5 121 41.3
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 3.9e-21 105.5 166 36.7
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 6.7e-21 104.8 123 46.3
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 8.8e-21 104.4 129 43.4
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 8.8e-21 104.4 135 41.5
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 1.1e-20 104.0 124 43.5
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 1.5e-20 103.6 120 41.7
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 1.5e-20 103.6 120 41.7
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 1.5e-20 103.6 120 41.7
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 1.5e-20 103.6 120 41.7
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 1.5e-20 103.6 120 41.7
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 1.5e-20 103.6 120 41.7
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 2.6e-20 102.8 127 43.3
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 3.3e-20 102.4 120 41.7
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 3.3e-20 102.4 150 38.0
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 3.3e-20 102.4 159 38.4
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 4.4e-20 102.1 120 40.8
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 4.4e-20 102.1 120 40.8
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 7.4e-20 101.3 120 40.8
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 1.3e-19 100.5 91 53.8
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 2.2e-19 99.8 120 40.8
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 2.2e-19 99.8 86 55.8
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 4.8e-19 98.6 88 53.4
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 6.3e-19 98.2 120 40.0
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 1.1e-18 97.4 150 38.7
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 7.0e-18 94.7 101 48.5
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 9.1e-18 94.4 85 52.9
CBR_g57071 Chara braunii HOM05D001740 ORTHO05D001468 5.9e-17 91.7 85 43.5
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 1.0e-16 90.9 131 40.5
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 2.9e-16 89.4 77 53.2
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 8.5e-16 87.8 139 36.0
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 2.5e-15 86.3 96 47.9
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 7.2e-15 84.7 97 48.5
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 9.4e-15 84.3 96 47.9
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 1.2e-14 84.0 109 41.3
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 1.6e-14 83.6 110 40.0
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 4.7e-14 82.0 91 46.2
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 1.0e-13 80.9 92 43.5
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 3.3e-12 75.9 96 43.8
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 2.8e-11 72.8 104 42.3
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 5.3e-10 68.6 66 47.0
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 1.0e-08 64.3 54 55.6
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 1.0e-08 64.3 72 45.8
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 2.2e-08 63.2 58 55.2
Potri.001G240904 Populus trichocarpa HOM05D005570 ORTHO05D007368 8.5e-08 61.2 48 56.2
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 2.7e-06 56.2 53 49.1
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 2.7e-06 56.2 52 50.0
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 6.1e-06 55.1 104 38.5


User provided reference genes

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