Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 6.3e-96 354.0 165 100.0
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.3e-61 239.2 141 73.0
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 3.1e-58 228.8 141 70.2
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 1.1e-55 220.3 154 64.3
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 4.1e-55 218.4 146 64.4
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.7e-53 213.0 152 62.5
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 1.7e-53 213.0 145 64.1
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.0e-53 212.2 145 62.1
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 3.0e-53 212.2 145 64.1
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 5.0e-53 211.5 146 59.6
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 6.6e-53 211.1 154 61.0
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 6.6e-53 211.1 145 62.8
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 8.6e-53 210.7 153 61.4
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 8.6e-53 210.7 146 62.3
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 8.6e-53 210.7 145 61.4
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 1.1e-52 210.3 146 59.6
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 1.1e-52 210.3 152 61.2
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 1.9e-52 209.5 145 61.4
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.9e-52 209.5 145 61.4
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.9e-52 209.5 145 61.4
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.9e-52 209.5 145 61.4
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 2.5e-52 209.1 146 60.3
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 4.3e-52 208.4 146 59.6
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 4.3e-52 208.4 146 60.3
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 4.3e-52 208.4 149 62.4
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 4.3e-52 208.4 144 63.2
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 7.3e-52 207.6 154 59.7
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 9.5e-52 207.2 153 60.8
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 1.2e-51 206.8 162 57.4
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.2e-51 206.8 153 60.8
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 1.2e-51 206.8 146 63.0
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 1.6e-51 206.5 150 59.3
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 1.6e-51 206.5 145 60.0
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 2.1e-51 206.1 153 59.5
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 2.1e-51 206.1 153 59.5
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.1e-51 206.1 142 62.7
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 2.1e-51 206.1 145 61.4
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 3.6e-51 205.3 150 58.7
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 3.6e-51 205.3 149 59.7
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 4.7e-51 204.9 142 63.4
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 4.7e-51 204.9 145 61.4
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 4.7e-51 204.9 145 61.4
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 4.7e-51 204.9 146 57.5
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 6.2e-51 204.5 142 62.0
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 6.2e-51 204.5 149 60.4
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 8.1e-51 204.1 152 58.6
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 1.1e-50 203.8 153 59.5
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.1e-50 203.8 144 61.8
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 1.1e-50 203.8 154 58.4
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 1.1e-50 203.8 145 58.6
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 1.4e-50 203.4 153 59.5
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 1.4e-50 203.4 153 58.8
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.4e-50 203.4 154 59.1
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 1.8e-50 203.0 146 61.6
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 1.8e-50 203.0 153 58.8
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 1.8e-50 203.0 153 58.8
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.8e-50 203.0 145 60.7
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 2.3e-50 202.6 140 62.9
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 2.3e-50 202.6 153 58.2
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.3e-50 202.6 144 61.1
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 3.1e-50 202.2 146 58.2
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 3.1e-50 202.2 147 61.9
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 5.2e-50 201.4 145 59.3
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 5.2e-50 201.4 142 61.3
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 6.8e-50 201.1 142 62.0
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 6.8e-50 201.1 153 56.9
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 6.8e-50 201.1 145 60.0
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 6.8e-50 201.1 153 58.2
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.2e-49 200.3 143 60.8
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 1.2e-49 200.3 154 58.4
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.2e-49 200.3 146 60.3
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 2.0e-49 199.5 153 58.2
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 2.0e-49 199.5 143 60.1
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 2.0e-49 199.5 149 55.0
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 2.0e-49 199.5 140 60.7
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 3.4e-49 198.7 143 59.4
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 4.4e-49 198.4 145 58.6
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 4.4e-49 198.4 145 58.6
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 5.8e-49 198.0 149 54.4
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 7.5e-49 197.6 147 59.9
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 9.8e-49 197.2 145 58.6
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 9.8e-49 197.2 143 58.0
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 1.3e-48 196.8 145 60.7
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 2.2e-48 196.1 146 57.5
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 2.2e-48 196.1 146 57.5
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 3.7e-48 195.3 161 55.3
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 3.7e-48 195.3 161 55.3
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 4.9e-48 194.9 134 61.9
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 6.4e-48 194.5 145 57.2
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 8.3e-48 194.1 143 57.3
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 1.1e-47 193.7 146 56.8
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 1.4e-47 193.4 143 58.0
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 1.4e-47 193.4 145 57.9
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 2.4e-47 192.6 145 55.2
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 3.2e-47 192.2 145 56.6
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 9.2e-47 190.7 133 62.4
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 9.2e-47 190.7 146 56.8
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 1.7e-45 186.4 128 62.5
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 3.9e-45 185.3 205 44.4
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 9.5e-44 180.6 147 54.4
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 4.7e-43 178.3 145 55.2
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 1.1e-42 177.2 131 58.0
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 5.2e-42 174.9 153 53.6
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.0e-41 172.9 129 58.1
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 5.8e-41 171.4 146 52.7
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 3.8e-40 168.7 106 63.2
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 2.4e-39 166.0 125 57.6
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 5.4e-39 164.9 117 62.4
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 7.8e-38 161.0 132 58.3
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.3e-37 159.5 118 58.5
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 2.3e-37 159.5 121 57.0
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 6.6e-37 157.9 104 63.5
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 7.3e-36 154.5 95 68.4
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 6.2e-35 151.4 103 62.1
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 4.0e-34 148.7 104 61.5
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 5.2e-34 148.3 93 66.7
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 1.2e-33 147.1 106 56.6
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 9.9e-33 144.1 94 63.8
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 2.2e-32 142.9 177 41.2
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 7.1e-31 137.9 154 44.8
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 6.9e-26 121.3 94 56.4
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 6.7e-21 104.8 147 43.5
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.1e-20 104.0 128 40.6
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.5e-20 103.6 79 57.0
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 2.5e-20 102.8 88 53.4
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 1.5e-17 93.6 67 59.7
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 8.7e-13 77.8 52 63.5
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 1.2e-09 67.4 58 56.9


User provided reference genes

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