Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 1.8e-240 835.5 428 100.0
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 1.7e-201 706.1 431 84.9
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 1.5e-80 304.3 440 48.6
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 3.3e-72 276.6 444 45.7
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 2.6e-37 160.6 315 39.4
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 6.5e-36 156.0 422 35.3
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 9.4e-27 125.6 381 33.1
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 1.6e-26 124.8 429 31.5
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 4.0e-25 120.2 355 34.6
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 4.0e-25 120.2 390 34.1
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 3.4e-24 117.1 182 39.6
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 3.4e-24 117.1 378 33.1
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 2.8e-23 114.0 208 38.9
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 3.7e-23 113.6 172 39.0
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 3.7e-23 113.6 182 39.0
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 3.7e-23 113.6 224 39.3
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 6.3e-23 112.8 379 32.2
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 8.3e-23 112.5 391 31.5
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 1.8e-22 111.3 197 38.6
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 4.1e-22 110.2 308 33.1
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 5.4e-22 109.8 206 38.3
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 1.2e-21 108.6 437 31.8
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 1.6e-21 108.2 164 42.1
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 1.6e-21 108.2 136 48.5
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 1.6e-21 108.2 237 34.6
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 3.5e-21 107.1 130 50.8
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 3.5e-21 107.1 306 35.0
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 4.5e-21 106.7 303 35.3
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 5.9e-21 106.3 391 33.0
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 5.9e-21 106.3 409 30.8
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 7.7e-21 105.9 134 47.8
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 1.0e-20 105.5 243 34.6
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 1.0e-20 105.5 132 49.2
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 1.7e-20 104.8 173 39.3
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 1.7e-20 104.8 308 32.5
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 2.3e-20 104.4 199 38.7
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 3.8e-20 103.6 399 31.6
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 6.6e-20 102.8 309 33.3
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 1.1e-19 102.1 308 32.1
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 1.1e-19 102.1 381 29.7
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 1.1e-19 102.1 181 38.7
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 1.1e-19 102.1 417 31.2
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 1.5e-19 101.7 389 30.8
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 1.9e-19 101.3 404 30.9
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 1.9e-19 101.3 302 32.5
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 3.3e-19 100.5 302 32.5
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 3.3e-19 100.5 351 32.5
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 3.3e-19 100.5 185 40.0
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 4.2e-19 100.1 320 32.2
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 5.5e-19 99.8 149 44.3
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 5.5e-19 99.8 317 32.5
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 5.5e-19 99.8 400 30.8
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 9.5e-19 99.0 304 33.6
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 9.5e-19 99.0 295 31.5
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 9.5e-19 99.0 424 32.1
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 1.2e-18 98.6 138 47.1
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 1.2e-18 98.6 324 32.7
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 1.6e-18 98.2 199 37.7
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 2.1e-18 97.8 183 38.3
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 2.1e-18 97.8 140 45.0
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 2.1e-18 97.8 302 32.5
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 2.1e-18 97.8 250 35.6
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 2.8e-18 97.4 402 31.3
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 3.6e-18 97.1 315 32.4
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 3.6e-18 97.1 139 43.2
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 3.6e-18 97.1 146 41.8
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 6.1e-18 96.3 330 31.8
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 8.0e-18 95.9 138 42.8
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 1.0e-17 95.5 278 33.8
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 1.8e-17 94.7 241 35.3
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 3.0e-17 94.0 321 30.2
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 4.0e-17 93.6 331 30.5
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 6.8e-17 92.8 429 27.3
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 8.9e-17 92.4 400 30.0
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.2e-16 92.0 390 29.7
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 1.2e-16 92.0 148 41.9
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 1.5e-16 91.7 285 33.3
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 2.6e-16 90.9 305 32.8
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 3.4e-16 90.5 390 30.0
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 3.4e-16 90.5 360 31.4
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 4.4e-16 90.1 401 29.4
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 4.4e-16 90.1 395 30.1
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 4.4e-16 90.1 173 37.0
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 5.7e-16 89.7 382 29.1
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 7.5e-16 89.4 238 37.4
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 7.5e-16 89.4 310 31.0
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 9.8e-16 89.0 325 32.0
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 9.8e-16 89.0 395 31.9
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 1.3e-15 88.6 109 49.5
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 2.2e-15 87.8 136 41.9
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 2.2e-15 87.8 137 46.0
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 6.3e-15 86.3 348 29.9
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 8.3e-15 85.9 389 29.0
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 8.3e-15 85.9 191 34.6
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 1.8e-14 84.7 133 43.6
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 1.8e-14 84.7 270 32.6
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 1.8e-14 84.7 232 34.1
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 1.8e-14 84.7 121 46.3
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 2.4e-14 84.3 136 41.2
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 4.1e-14 83.6 136 42.6
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 4.1e-14 83.6 132 40.9
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 7.0e-14 82.8 136 41.9
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 7.0e-14 82.8 135 40.7
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 7.0e-14 82.8 135 40.7
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 7.0e-14 82.8 136 41.2
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 9.2e-14 82.4 169 36.1
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 4.6e-13 80.1 156 39.1
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 4.6e-13 80.1 144 39.6
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 7.8e-13 79.3 134 39.6
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 7.8e-13 79.3 298 31.5
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 7.8e-13 79.3 130 39.2
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 1.3e-12 78.6 146 39.0
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 1.3e-12 78.6 146 39.0
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 1.3e-12 78.6 136 39.0
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 1.7e-12 78.2 134 40.3
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 3.9e-12 77.0 146 39.0
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 5.0e-12 76.6 176 34.1
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 1.1e-11 75.5 353 30.3
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 1.5e-11 75.1 323 30.0
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 3.3e-11 73.9 127 40.2
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 4.3e-11 73.6 128 39.8
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 5.6e-11 73.2 101 45.5
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 1.6e-10 71.6 61 59.0
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 4.7e-10 70.1 274 28.8
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 1.4e-09 68.6 97 46.4
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 4.0e-09 67.0 44 65.9
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 1.5e-08 65.1 252 31.3
Mapoly0097s0021 Marchantia polymorpha HOM05D002346 ORTHO05D002452 2.6e-08 64.3 248 31.9
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 3.4e-08 63.9 445 26.7
SEGI_09816 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 9.8e-08 62.4 171 32.2
AagrBONN_evm.TU.Sc2ySwM_368.2073 Anthoceros agrestis HOM05D002346 ORTHO05D038404 4.9e-07 60.1 170 33.5
CANSAT80G2239 Cannabis sativa HOM05D002346 ORTHO05D002452 9.2e-06 55.8 107 39.3


User provided reference genes

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