Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 0.0e+00 1270.4 648 100.0
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.5e-95 354.0 633 34.3
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 1.0e-88 332.0 630 33.0
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 5.5e-87 326.2 608 34.5
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.7e-86 323.9 628 31.5
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 5.7e-84 316.2 605 34.0
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 1.5e-79 301.6 621 30.9
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.5e-79 300.8 643 29.7
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 2.3e-77 294.3 633 29.5
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 5.2e-77 293.1 652 31.9
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.2e-76 292.0 645 31.2
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 1.5e-76 291.6 605 31.4
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 5.4e-74 283.1 604 31.8
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 1.2e-73 282.0 615 29.9
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 2.7e-73 280.8 558 33.2
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 8.6e-72 275.8 600 30.2
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 2.5e-71 274.2 606 30.7
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 3.3e-71 273.9 523 34.4
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 3.3e-71 273.9 520 31.9
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.8e-69 268.1 639 28.0
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 8.3e-67 259.2 456 32.9
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 2.4e-66 257.7 518 33.2
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 9.2e-66 255.8 509 31.2
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 1.2e-65 255.4 616 29.7
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.6e-65 255.0 645 28.7
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 1.0e-64 252.3 547 29.8
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 1.3e-64 251.9 607 29.8
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 2.9e-64 250.8 637 27.8
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 6.6e-64 249.6 624 29.0
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 5.6e-63 246.5 609 28.4
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 9.5e-63 245.7 645 28.2
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 1.6e-62 245.0 603 29.2
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 2.1e-62 244.6 606 27.7
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 6.1e-62 243.0 606 28.1
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 6.1e-62 243.0 606 28.9
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 1.0e-61 242.3 507 31.0
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 1.0e-61 242.3 646 30.7
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 2.3e-61 241.1 547 29.4
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 8.9e-61 239.2 509 30.1
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 1.2e-60 238.8 570 28.6
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 3.7e-59 233.8 610 28.2
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 8.3e-59 232.6 609 27.9
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 8.3e-59 232.6 584 28.3
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 1.4e-58 231.9 617 28.4
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 4.1e-58 230.3 516 29.7
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 2.0e-57 228.0 615 28.0
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 4.6e-57 226.9 515 28.2
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 6.0e-57 226.5 608 27.6
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 7.8e-57 226.1 613 27.1
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 1.3e-56 225.3 639 27.1
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 1.3e-56 225.3 639 27.1
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 3.9e-56 223.8 512 29.3
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 6.6e-56 223.0 605 27.6
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 2.5e-55 221.1 647 27.0
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 3.3e-55 220.7 354 35.6
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 9.5e-55 219.2 558 27.6
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 4.7e-54 216.9 619 26.5
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 1.8e-53 214.9 514 28.0
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 1.8e-53 214.9 514 28.0
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 3.1e-53 214.2 558 27.8
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 5.2e-53 213.4 540 29.8
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 8.9e-53 212.6 514 27.8
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 3.4e-52 210.7 606 25.9
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 9.8e-52 209.1 617 26.4
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 9.8e-52 209.1 617 26.4
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 2.2e-51 208.0 609 27.4
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 2.9e-51 207.6 626 24.9
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 4.9e-51 206.8 606 25.7
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 7.0e-50 203.0 457 29.8
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 1.6e-49 201.8 602 27.9
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 2.1e-49 201.4 612 26.8
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 2.1e-49 201.4 586 26.6
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 6.0e-49 199.9 508 26.0
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 1.3e-48 198.7 601 25.8
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 1.5e-47 195.3 523 26.0
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 2.5e-47 194.5 322 33.5
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 5.6e-47 193.4 503 26.8
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 9.5e-47 192.6 504 29.0
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 6.2e-46 189.9 611 26.4
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 6.2e-46 189.9 510 27.3
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 8.3e-43 179.5 636 25.5
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 2.4e-42 177.9 604 25.8
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 7.1e-42 176.4 436 29.4
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 1.2e-41 175.6 510 25.1
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 1.3e-40 172.2 604 24.8
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 3.9e-40 170.6 483 26.1
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 5.6e-39 166.8 615 24.4
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 1.8e-37 161.8 510 23.9
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 3.4e-36 157.5 602 23.9
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 4.4e-36 157.1 612 24.0
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 2.9e-35 154.5 367 28.9
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 1.4e-34 152.1 623 23.8
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 9.2e-34 149.4 508 23.4
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 1.3e-32 145.6 469 24.7
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 3.3e-31 141.0 511 23.7
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 7.6e-28 129.8 607 21.4
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 4.9e-27 127.1 435 23.9
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 9.3e-26 122.9 608 20.2
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 7.8e-25 119.8 607 20.9
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 1.3e-24 119.0 608 20.9
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 6.6e-24 116.7 611 21.4
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 1.9e-23 115.2 322 28.0
Hma1.2p1_0450F.1_g155520 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 1.4e-21 109.0 174 36.8
Hma1.2p1_1530F.1_g289190 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 1.1e-18 99.4 194 32.0
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.4e-18 98.2 210 32.4
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 1.1e-15 89.4 562 22.4
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 1.9e-15 88.6 322 21.7
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 2.9e-11 74.7 163 31.9
Hma1.2p1_0082F.1_g042550 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 2.5e-10 71.6 134 35.1
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 4.2e-10 70.9 333 22.5
Haze_16605 Corylus avellana HOM05D003361 ORTHO05D003760 7.1e-10 70.1 194 29.9
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 2.1e-09 68.6 156 31.4
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 2.1e-09 68.6 153 29.4
PGR042G2755 Punica granatum HOM05D003506 ORTHO05D004063 2.7e-09 68.2 391 25.6
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 3.3e-07 61.2 193 31.1
PGR044G0363 Punica granatum HOM05D003506 ORTHO05D004063 2.8e-06 58.2 230 28.7
PGSC0003DMG400022247 Solanum tuberosum HOM05D002887 ORTHO05D003159 3.7e-06 57.8 95 42.1
arahy.Tifrunner.gnm1.ann1.MWAB5B Arachis hypogaea HOM05D003361 ORTHO05D003760 4.8e-06 57.4 264 25.4
Nitab4.5_0000294g0200 Nicotiana tabacum HOM05D002887 ORTHO05D003159 8.2e-06 56.6 108 36.1
Nitab4.5_0001235g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 8.2e-06 56.6 108 36.1


User provided reference genes

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