Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c21_18720 Physcomitrium patens HOM05D006982 ORTHO05D008909 2.8e-158 562.0 299 100.0
EL10Ac2g03084 Beta vulgaris HOM05D006982 ORTHO05D008909 5.4e-45 185.7 158 56.3
ECA238G0675 Erigeron canadensis HOM05D006982 ORTHO05D008909 7.0e-45 185.3 183 52.5
SMO164G0193 Selaginella moellendorffii HOM05D006982 ORTHO05D008909 7.0e-45 185.3 156 57.1
Sc11g0004740 Simmondsia chinensis HOM05D006982 ORTHO05D008909 9.2e-45 184.9 157 55.4
HanXRQChr07g0199461 Helianthus annuus HOM05D006982 ORTHO05D008909 3.5e-44 183.0 183 50.3
Aqoxy3G00454 Aquilegia oxysepala HOM05D006982 ORTHO05D008909 7.8e-44 181.8 158 57.0
Nn4g23351 Nelumbo nucifera HOM05D006982 ORTHO05D008909 7.8e-44 181.8 157 54.8
A06p40000 Brassica napus HOM05D006982 ORTHO05D008909 1.0e-43 181.4 161 54.0
Eucgr.I01983 Eucalyptus grandis HOM05D006982 ORTHO05D008909 1.0e-43 181.4 155 58.7
BolC7t44339H Brassica oleracea HOM05D006982 ORTHO05D008909 1.3e-43 181.0 161 53.4
CARHR292480 Cardamine hirsuta HOM05D006982 ORTHO05D008909 2.3e-43 180.3 153 56.9
TPR.G26172 Trifolium pratense HOM05D006982 ORTHO05D008909 2.9e-43 179.9 158 54.4
Os03g0257000 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 3.9e-43 179.5 161 52.8
Psat1g070160 Pisum sativum HOM05D006982 ORTHO05D008909 3.9e-43 179.5 154 55.2
Potri.017G090400 Populus trichocarpa HOM05D006982 ORTHO05D008909 3.9e-43 179.5 157 55.4
PGR004G0184 Punica granatum HOM05D006982 ORTHO05D008909 3.9e-43 179.5 157 55.4
Manes.01G098700 Manihot esculenta HOM05D006982 ORTHO05D008909 5.0e-43 179.1 157 55.4
Lsat_1_v5_gn_2_87800 Lactuca sativa HOM05D006982 ORTHO05D008909 6.6e-43 178.7 179 52.5
C02p55480 Brassica napus HOM05D006982 ORTHO05D008909 8.6e-43 178.3 153 56.2
BolC2t11604H Brassica oleracea HOM05D006982 ORTHO05D008909 8.6e-43 178.3 153 56.2
MD09G1061600 Malus domestica HOM05D006982 ORTHO05D008909 8.6e-43 178.3 158 55.7
AL5G19280 Arabidopsis lyrata HOM05D006982 ORTHO05D008909 1.1e-42 177.9 161 54.0
Lj2g0023544 Lotus japonicus HOM05D006982 ORTHO05D008909 1.1e-42 177.9 158 53.8
GSVIVG01011493001 Vitis vinifera HOM05D006982 ORTHO05D008909 1.1e-42 177.9 156 55.1
Duzib187G0332 Durio zibethinus HOM05D006982 ORTHO05D008909 1.5e-42 177.6 156 55.1
Glyma.13G058700 Glycine max HOM05D006982 ORTHO05D008909 1.9e-42 177.2 155 54.8
Os03g0209700 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 1.9e-42 177.2 158 53.8
Thhalv10005014m.g Eutrema salsugineum HOM05D006982 ORTHO05D008909 2.5e-42 176.8 161 52.8
Sed0004734 Sechium edule HOM05D006982 ORTHO05D008909 3.3e-42 176.4 157 52.9
Zm00001eb011170 Zea mays HOM05D006982 ORTHO05D008909 3.3e-42 176.4 150 54.0
A02p36510 Brassica napus HOM05D006982 ORTHO05D008909 4.3e-42 176.0 153 55.6
BraA02t08647Z Brassica rapa HOM05D006982 ORTHO05D008909 4.3e-42 176.0 153 55.6
Rhsim10G0045300 Rhododendron simsii HOM05D006982 ORTHO05D008909 4.3e-42 176.0 153 55.6
SGA_v2.0_scaffold4G02409 Striga asiatica HOM05D006982 ORTHO05D008909 4.3e-42 176.0 156 53.2
Carub.0005s0799 Capsella rubella HOM05D006982 ORTHO05D008909 5.6e-42 175.6 153 54.9
FvH4_6g47420 Fragaria vesca HOM05D006982 ORTHO05D008909 5.6e-42 175.6 158 54.4
FAN14G3321 Fragaria x ananassa HOM05D006982 ORTHO05D008909 5.6e-42 175.6 158 54.4
vmacro05662 Vaccinium macrocarpon HOM05D006982 ORTHO05D008909 5.6e-42 175.6 157 54.1
AT3G29280 Arabidopsis thaliana HOM05D006982 ORTHO05D008909 9.5e-42 174.9 161 52.8
Sp2g17880 Schrenkiella parvula HOM05D006982 ORTHO05D008909 9.5e-42 174.9 153 54.9
BcaC03g17569 Brassica carinata HOM05D006982 ORTHO05D008909 1.2e-41 174.5 153 55.6
ClCG05G014130 Citrullus lanatus HOM05D006982 ORTHO05D008909 1.2e-41 174.5 154 51.9
Hma1.2p1_1813F.1_g303760 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 1.2e-41 174.5 157 51.6
Hma1.2p1_3044F.1_g332060 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 1.2e-41 174.5 157 51.6
Thecc.04G091200 Theobroma cacao HOM05D006982 ORTHO05D008909 1.2e-41 174.5 155 55.5
TWI60G0050 Tripterygium wilfordii HOM05D006982 ORTHO05D008909 1.2e-41 174.5 151 57.6
TAR629G3328 Trochodendron aralioides HOM05D006982 ORTHO05D008909 1.2e-41 174.5 157 52.9
Gorai.006G012000 Gossypium raimondii HOM05D006982 ORTHO05D008909 1.6e-41 174.1 160 54.4
Cc07_g04010 Coffea canephora HOM05D006982 ORTHO05D008909 2.1e-41 173.7 155 54.8
Solyc03g013250.4 Solanum lycopersicum HOM05D006982 ORTHO05D008909 2.1e-41 173.7 153 52.9
BcaB07g30087 Brassica carinata HOM05D006982 ORTHO05D008909 2.8e-41 173.3 153 54.9
CANSAT64G0008 Cannabis sativa HOM05D006982 ORTHO05D008909 2.8e-41 173.3 152 54.6
MELO3C014935.2 Cucumis melo HOM05D006982 ORTHO05D008909 2.8e-41 173.3 154 51.9
Phvul.004G033900 Phaseolus vulgaris HOM05D006982 ORTHO05D008909 2.8e-41 173.3 155 53.5
Sopen03g016600 Solanum pennellii HOM05D006982 ORTHO05D008909 2.8e-41 173.3 153 52.9
Aa31LG2G3980 Aethionema arabicum HOM05D006982 ORTHO05D008909 3.6e-41 172.9 156 52.6
Gohir.D09G010400 Gossypium hirsutum HOM05D006982 ORTHO05D008909 3.6e-41 172.9 160 53.8
QL02p039506 Quercus lobata HOM05D006982 ORTHO05D008909 3.6e-41 172.9 158 53.2
VMungo0464G0061 Vigna mungo HOM05D006982 ORTHO05D008909 3.6e-41 172.9 155 52.9
FAN09G4389 Fragaria x ananassa HOM05D006982 ORTHO05D008909 4.7e-41 172.6 158 53.8
CAN.G734.5 Capsicum annuum HOM05D006982 ORTHO05D008909 6.1e-41 172.2 150 53.3
Dinv11484 Davidia involucrata HOM05D006982 ORTHO05D008909 8.0e-41 171.8 154 53.2
Nitab4.5_0005196g0040 Nicotiana tabacum HOM05D006982 ORTHO05D008909 8.0e-41 171.8 161 50.9
CsaV3_3G026330 Cucumis sativus L. HOM05D006982 ORTHO05D008909 1.4e-40 171.0 154 51.3
Atru.chr8.390 Acer truncatum HOM05D006982 ORTHO05D008909 1.8e-40 170.6 155 52.9
MSTRG.3019 Avicennia marina HOM05D006982 ORTHO05D008909 1.8e-40 170.6 160 52.5
AUR62042567 Chenopodium quinoa HOM05D006982 ORTHO05D008909 1.8e-40 170.6 154 51.9
Ciclev10012958m.g Citrus clementina HOM05D006982 ORTHO05D008909 1.8e-40 170.6 158 51.3
Migut.H00650 Erythranthe guttata HOM05D006982 ORTHO05D008909 1.8e-40 170.6 157 52.2
Nitab4.5_0001637g0060 Nicotiana tabacum HOM05D006982 ORTHO05D008909 1.8e-40 170.6 161 49.7
RcHm_v2.0_Chr2g0166501 Rosa chinensis HOM05D006982 ORTHO05D008909 1.8e-40 170.6 152 55.9
RcHm_v2.0_Chr2g0166491 Rosa chinensis HOM05D006982 ORTHO05D008909 3.1e-40 169.9 158 53.2
BraA06t26915Z Brassica rapa HOM05D006982 ORTHO05D008909 5.2e-40 169.1 138 58.0
SalBow1G5236 Salvia bowleyana HOM05D006982 ORTHO05D008909 5.2e-40 169.1 152 52.0
FAN02G3418 Fragaria x ananassa HOM05D006982 ORTHO05D008909 6.8e-40 168.7 157 52.9
SEGI_41437 Sequoiadendron giganteum HOM05D006982 ORTHO05D008909 1.2e-39 167.9 155 51.6
Prupe.3G258600 Prunus persica HOM05D006982 ORTHO05D008909 1.5e-39 167.5 168 50.6
CiPaw.03G091200 Carya illinoinensis HOM05D006982 ORTHO05D008909 2.6e-39 166.8 157 50.3
Glyma.19G027800 Glycine max HOM05D006982 ORTHO05D008909 4.4e-39 166.0 155 52.3
ATR0064G116 Amborella trichopoda HOM05D006982 ORTHO05D008909 5.8e-39 165.6 165 50.3
Haze_14468 Corylus avellana HOM05D006982 ORTHO05D008909 5.8e-39 165.6 158 50.0
THA.LOC104805498 Tarenaya hassleriana HOM05D006982 ORTHO05D008909 7.5e-39 165.2 158 51.9
PSO017G1487 Papaver somniferum HOM05D006982 ORTHO05D008909 1.7e-38 164.1 161 50.3
Cpa.g.sc14.148 Carica papaya HOM05D006982 ORTHO05D008909 2.9e-38 163.3 139 58.3
PSO478G0313 Papaver somniferum HOM05D006982 ORTHO05D008909 3.7e-38 162.9 161 50.3
Lalb_Chr02g0159031 Lupinus albus HOM05D006982 ORTHO05D008909 8.3e-38 161.8 158 50.6
Sabra17G0079600 Salix brachista HOM05D006982 ORTHO05D008909 3.2e-37 159.8 152 53.3
Actinidia07827 Actinidia chinensis HOM05D006982 ORTHO05D008909 6.6e-35 152.1 137 54.0
Hund13166 Selenicereus undatus HOM05D006982 ORTHO05D008909 4.3e-34 149.4 146 52.1
Gohir.A09G011401 Gossypium hirsutum HOM05D006982 ORTHO05D008909 1.8e-32 144.1 181 46.4
CDE04G2259 Ceratophyllum demersum HOM05D006982 ORTHO05D008909 6.8e-32 142.1 129 52.7
Ah.10g031970 Amaranthus hybridus HOM05D006982 ORTHO05D008909 1.1e-29 134.8 172 44.2
Lj4A116T80 Lonicera japonica HOM05D006982 ORTHO05D008909 1.2e-28 131.3 120 53.3
Medtr6g013815 Medicago truncatula HOM05D006982 ORTHO05D008909 1.0e-27 128.3 121 50.4
COL.COLO4_21380 Corchorus olitorius HOM05D006982 ORTHO05D008909 3.0e-27 126.7 120 50.8
BolC2t11598H Brassica oleracea HOM05D006982 ORTHO05D008909 6.6e-27 125.6 131 49.6
Peaxi162Scf00451g00425 Petunia axillaris HOM05D006982 ORTHO05D008909 3.3e-26 123.2 163 42.9
arahy.Tifrunner.gnm1.ann1.NGZQ86 Arachis hypogaea HOM05D006982 ORTHO05D008909 3.6e-25 119.8 150 44.7
unitig_899.g15159 Utricularia gibba HOM05D006982 ORTHO05D008909 3.6e-25 119.8 154 44.8
arahy.Tifrunner.gnm1.ann1.84WVAW Arachis hypogaea HOM05D006982 ORTHO05D008909 3.4e-23 113.2 87 62.1
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-20 104.0 94 52.1
FAN05G3993 Fragaria x ananassa HOM05D006982 ORTHO05D008909 2.7e-20 103.6 89 59.6
C07p38170 Brassica napus HOM05D006982 ORTHO05D008909 6.6e-19 99.0 103 45.6
TPR.G3955 Trifolium pratense HOM05D006982 ORTHO05D008909 1.4e-16 91.3 61 65.6
C02p55410 Brassica napus HOM05D006982 ORTHO05D008909 1.3e-14 84.7 112 42.0
CSS0035536 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 5.1e-11 72.8 79 44.3


User provided reference genes

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