Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c21_16190 Physcomitrium patens HOM05D005355 ORTHO05D006591 3.0e-197 692.2 467 100.0
Nn5g28219 Nelumbo nucifera HOM05D005355 ORTHO05D006591 1.1e-39 168.7 454 31.5
ECA238G0419 Erigeron canadensis HOM05D005355 ORTHO05D006591 1.5e-39 168.3 439 36.2
Os11g0544600 Oryza sativa ssp. japonica HOM05D005355 ORTHO05D006591 3.7e-38 163.7 444 33.3
CAN.G127.21 Capsicum annuum HOM05D005355 ORTHO05D006591 9.1e-37 159.1 441 30.6
Lsat_1_v5_gn_5_101461 Lactuca sativa HOM05D005355 ORTHO05D006591 1.5e-36 158.3 443 38.1
Ca_15194_v3 Cicer arietinum L. HOM05D005355 ORTHO05D006591 5.9e-36 156.4 461 35.4
Potri.002G085000 Populus trichocarpa HOM05D005355 ORTHO05D006591 7.7e-36 156.0 445 32.4
Migut.F01876 Erythranthe guttata HOM05D005355 ORTHO05D006591 1.0e-35 155.6 458 40.6
SGA_v2.0_scaffold122G33176 Striga asiatica HOM05D005355 ORTHO05D006591 1.0e-35 155.6 436 35.1
PSO528G0270 Papaver somniferum HOM05D005355 ORTHO05D006591 6.5e-35 152.9 446 30.3
PGR044G2411 Punica granatum HOM05D005355 ORTHO05D006591 6.5e-35 152.9 467 34.3
PSO170G1761 Papaver somniferum HOM05D005355 ORTHO05D006591 1.4e-34 151.8 450 29.6
VMungo1309G2754 Vigna mungo HOM05D005355 ORTHO05D006591 2.5e-34 151.0 439 32.6
Eucgr.F04357 Eucalyptus grandis HOM05D005355 ORTHO05D006591 4.2e-34 150.2 455 33.8
Sopen11g007660 Solanum pennellii HOM05D005355 ORTHO05D006591 5.5e-34 149.8 441 32.0
GSVIVG01008886001 Vitis vinifera HOM05D005355 ORTHO05D006591 7.2e-34 149.4 470 28.9
Zm00001eb113700 Zea mays HOM05D005355 ORTHO05D006591 1.2e-33 148.7 415 35.2
MSTRG.326 Avicennia marina HOM05D005355 ORTHO05D006591 2.1e-33 147.9 434 32.0
MBI06_g20714_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 2.1e-33 147.9 437 30.9
CiPaw.05G223300 Carya illinoinensis HOM05D005355 ORTHO05D006591 2.7e-33 147.5 466 36.5
Thhalv10029139m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 2.7e-33 147.5 438 30.6
Solyc11g012920.3 Solanum lycopersicum HOM05D005355 ORTHO05D006591 2.7e-33 147.5 441 32.4
Mapoly0004s0202 Marchantia polymorpha HOM05D005355 ORTHO05D006591 3.6e-33 147.1 468 32.7
ATR0104G007 Amborella trichopoda HOM05D005355 ORTHO05D006591 6.1e-33 146.4 464 28.9
Oeu062052.1 Olea europaea HOM05D005355 ORTHO05D006591 6.1e-33 146.4 466 32.8
Manes.18G076200 Manihot esculenta HOM05D005355 ORTHO05D006591 7.9e-33 146.0 453 32.2
TAR625G0673 Trochodendron aralioides HOM05D005355 ORTHO05D006591 2.3e-32 144.4 438 34.5
Sp1g33640 Schrenkiella parvula HOM05D005355 ORTHO05D006591 3.0e-32 144.1 433 33.5
FAN27G0453 Fragaria x ananassa HOM05D005355 ORTHO05D006591 5.1e-32 143.3 447 34.9
Medtr3g072480 Medicago truncatula HOM05D005355 ORTHO05D006591 6.7e-32 142.9 458 31.4
EL10Ac1g01045 Beta vulgaris HOM05D005355 ORTHO05D006591 1.1e-31 142.1 478 34.5
CsaV3_2G014020 Cucumis sativus L. HOM05D005355 ORTHO05D006591 1.1e-31 142.1 453 28.3
Phvul.009G124200 Phaseolus vulgaris HOM05D005355 ORTHO05D006591 1.5e-31 141.7 426 28.4
CDE06G1640 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 3.3e-31 140.6 428 32.5
CARHR259390 Cardamine hirsuta HOM05D005355 ORTHO05D006591 4.4e-31 140.2 424 37.5
Thhalv10011453m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 4.4e-31 140.2 438 28.5
HanXRQChr04g0109451 Helianthus annuus HOM05D005355 ORTHO05D006591 4.4e-31 140.2 455 29.9
Sabra02G0066400 Salix brachista HOM05D005355 ORTHO05D006591 4.4e-31 140.2 473 30.7
ClCG08G005570 Citrullus lanatus HOM05D005355 ORTHO05D006591 9.7e-31 139.0 425 32.9
Glyma.04G250500 Glycine max HOM05D005355 ORTHO05D006591 1.3e-30 138.7 423 35.2
Gorai.010G049600 Gossypium raimondii HOM05D005355 ORTHO05D006591 1.7e-30 138.3 464 36.2
AL1G52440 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 2.2e-30 137.9 461 28.4
AT1G44780 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 2.8e-30 137.5 448 29.2
TWI12G0790 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 2.8e-30 137.5 428 29.9
CiPaw.06G029200 Carya illinoinensis HOM05D005355 ORTHO05D006591 3.7e-30 137.1 482 33.2
FAN20G1264 Fragaria x ananassa HOM05D005355 ORTHO05D006591 3.7e-30 137.1 447 39.6
FAN24G2565 Fragaria x ananassa HOM05D005355 ORTHO05D006591 6.3e-30 136.3 447 38.9
Hund27026 Selenicereus undatus HOM05D005355 ORTHO05D006591 6.3e-30 136.3 483 27.3
THA.LOC104817273 Tarenaya hassleriana HOM05D005355 ORTHO05D006591 8.2e-30 136.0 419 33.7
Duzib093G2154 Durio zibethinus HOM05D005355 ORTHO05D006591 1.1e-29 135.6 440 32.3
AT4G08310 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 1.8e-29 134.8 418 34.4
Thecc.08G123400 Theobroma cacao HOM05D005355 ORTHO05D006591 1.8e-29 134.8 465 36.6
Potri.005G176400 Populus trichocarpa HOM05D005355 ORTHO05D006591 2.4e-29 134.4 519 33.7
Aqoxy6G00187 Aquilegia oxysepala HOM05D005355 ORTHO05D006591 4.1e-29 133.7 436 28.9
Gohir.A06G043600 Gossypium hirsutum HOM05D005355 ORTHO05D006591 4.1e-29 133.7 480 32.5
Sp6g09690 Schrenkiella parvula HOM05D005355 ORTHO05D006591 4.1e-29 133.7 465 34.8
Aa31LG9G14260 Aethionema arabicum HOM05D005355 ORTHO05D006591 5.3e-29 133.3 414 35.5
arahy.Tifrunner.gnm1.ann1.SCI4MN Arachis hypogaea HOM05D005355 ORTHO05D006591 5.3e-29 133.3 456 34.0
Psat5g132440 Pisum sativum HOM05D005355 ORTHO05D006591 5.3e-29 133.3 472 35.4
BraSC36t46079Z Brassica rapa HOM05D005355 ORTHO05D006591 7.0e-29 132.9 434 32.0
A10p07350 Brassica napus HOM05D005355 ORTHO05D006591 9.1e-29 132.5 434 32.7
C06p00770 Brassica napus HOM05D005355 ORTHO05D006591 9.1e-29 132.5 435 29.9
CSS0023513 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 9.1e-29 132.5 454 28.9
QL09p035410 Quercus lobata HOM05D005355 ORTHO05D006591 9.1e-29 132.5 477 29.8
Glyma.06G112300 Glycine max HOM05D005355 ORTHO05D006591 1.2e-28 132.1 430 37.4
BcaB07g33934 Brassica carinata HOM05D005355 ORTHO05D006591 1.5e-28 131.7 413 31.0
Ciclev10000938m.g Citrus clementina HOM05D005355 ORTHO05D006591 2.0e-28 131.3 456 28.1
CSS0006134 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 2.6e-28 131.0 454 28.6
Cpa.g.sc36.50 Carica papaya HOM05D005355 ORTHO05D006591 2.6e-28 131.0 436 28.0
MD00G1157400 Malus domestica HOM05D005355 ORTHO05D006591 2.6e-28 131.0 508 31.9
CANSAT25G1794 Cannabis sativa HOM05D005355 ORTHO05D006591 3.5e-28 130.6 456 27.6
Lalb_Chr08g0241491 Lupinus albus HOM05D005355 ORTHO05D006591 4.5e-28 130.2 444 38.7
arahy.Tifrunner.gnm1.ann1.Y2U2DK Arachis hypogaea HOM05D005355 ORTHO05D006591 5.9e-28 129.8 444 34.9
Gorai.009G245100 Gossypium raimondii HOM05D005355 ORTHO05D006591 5.9e-28 129.8 461 40.8
TWI56G0611 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 1.0e-27 129.0 426 32.6
unitig_52.g17510 Utricularia gibba HOM05D005355 ORTHO05D006467 1.0e-27 129.0 487 30.6
Gohir.D05G236700 Gossypium hirsutum HOM05D005355 ORTHO05D006591 2.2e-27 127.9 434 41.2
Cc00_g04310 Coffea canephora HOM05D005355 ORTHO05D006591 2.9e-27 127.5 433 27.9
MD15G1351600 Malus domestica HOM05D005355 ORTHO05D006591 2.9e-27 127.5 493 27.4
Gohir.A05G234400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 3.8e-27 127.1 441 37.0
Lj1g0013612 Lotus japonicus HOM05D005355 ORTHO05D006591 3.8e-27 127.1 420 34.3
Carub.0006s2687 Capsella rubella HOM05D005355 ORTHO05D006591 5.0e-27 126.7 421 33.7
Sed0010827 Sechium edule HOM05D005355 ORTHO05D006591 5.0e-27 126.7 335 42.1
BolC6t35219H Brassica oleracea HOM05D005355 ORTHO05D006591 6.5e-27 126.3 415 28.9
MELO3C010600.2 Cucumis melo HOM05D005355 ORTHO05D006591 1.4e-26 125.2 391 29.9
Prupe.1G500200 Prunus persica HOM05D005355 ORTHO05D006591 2.5e-26 124.4 457 34.6
Sc01g0001210 Simmondsia chinensis HOM05D005355 ORTHO05D006591 4.2e-26 123.6 410 29.8
TPR.G24014 Trifolium pratense HOM05D005355 ORTHO05D006591 1.2e-25 122.1 450 35.3
MBI15_g20159_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.6e-25 121.7 432 26.9
Duzib116G0422 Durio zibethinus HOM05D005355 ORTHO05D006591 3.6e-25 120.6 461 34.9
Nitab4.5_0001803g0130 Nicotiana tabacum HOM05D005355 ORTHO05D006591 4.7e-25 120.2 363 28.7
RcHm_v2.0_Chr6g0295601 Rosa chinensis HOM05D005355 ORTHO05D006591 6.1e-25 119.8 447 34.0
BcaC08g42867 Brassica carinata HOM05D005355 ORTHO05D006591 8.0e-25 119.4 427 28.1
AL6G42080 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 2.3e-24 117.9 473 31.5
Sabra05G0133000 Salix brachista HOM05D005355 ORTHO05D006591 2.3e-24 117.9 542 27.5
DCAR_011614 Daucus carota HOM05D005355 ORTHO05D006591 3.9e-24 117.1 309 35.9
FAN15G2971 Fragaria x ananassa HOM05D005355 ORTHO05D006591 3.9e-24 117.1 466 36.3
Gohir.D06G044400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 5.2e-24 116.7 464 34.7
CARHR036040 Cardamine hirsuta HOM05D005355 ORTHO05D006591 1.5e-23 115.2 459 33.1
Dinv27329 Davidia involucrata HOM05D005355 ORTHO05D006591 2.6e-23 114.4 454 26.7
AUR62019052 Chenopodium quinoa HOM05D005355 ORTHO05D006591 2.2e-22 111.3 403 34.2
AagrBONN_evm.TU.Sc2ySwM_362.1810 Anthoceros agrestis HOM05D005355 ORTHO05D006591 8.2e-22 109.4 490 25.9
Haze_00460 Corylus avellana HOM05D005355 ORTHO05D006591 1.4e-21 108.6 289 30.4
CDE06G0823 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 3.1e-21 107.5 108 51.9
Lj4A622G14 Lonicera japonica HOM05D005355 ORTHO05D006591 1.2e-20 105.5 403 26.8
MBI15_g24178_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.2e-20 105.5 433 28.4
Atru.chr13.1433 Acer truncatum HOM05D005355 ORTHO05D006591 2.6e-20 104.4 270 30.7
FvH4_2g26711 Fragaria vesca HOM05D005355 ORTHO05D006591 4.5e-20 103.6 404 38.1
Cfa016002 Carpinus fangiana HOM05D005355 ORTHO05D006591 5.9e-20 103.2 385 31.7
vmacro00824 Vaccinium macrocarpon HOM05D005355 ORTHO05D006591 6.5e-19 99.8 110 47.3
SHI29459 Sapria himalayana HOM05D005355 ORTHO05D006591 1.9e-18 98.2 421 26.1
MBI15_g20157_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D010248 5.5e-18 96.7 268 31.7
MBI15_g19197_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 9.4e-18 95.9 82 58.5
SMO230G0058 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 1.8e-16 91.7 76 57.9
RhsimUnG0093800 Rhododendron simsii HOM05D005355 ORTHO05D006591 3.0e-16 90.9 384 30.5
Carub.0001s3530 Capsella rubella HOM05D005355 ORTHO05D006591 4.0e-16 90.5 108 47.2
SMO230G0121 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 5.2e-16 90.1 408 33.6
CBR_g29492 Chara braunii HOM05D005355 ORTHO05D006591 2.6e-15 87.8 93 50.5
COL.COLO4_35946 Corchorus olitorius HOM05D005355 ORTHO05D006591 4.4e-15 87.0 323 27.6
CDE06G1231 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 2.8e-14 84.3 211 32.7
AUR62027892 Chenopodium quinoa HOM05D005355 ORTHO05D006591 9.1e-13 79.3 382 36.4
Cre12.g539750 Chlamydomonas reinhardtii HOM05D005355 ORTHO05D006591 1.9e-10 71.6 113 41.6
Nitab4.5_0001273g0020 Nicotiana tabacum HOM05D005355 ORTHO05D006591 3.6e-09 67.4 67 53.7
Nn8g40262 Nelumbo nucifera HOM05D005355 ORTHO05D006591 5.2e-08 63.5 74 48.6
arahy.Tifrunner.gnm1.ann1.V8LFJN Arachis hypogaea HOM05D005355 ORTHO05D006591 1.5e-07 62.0 215 27.4
SEGI_25872 Sequoiadendron giganteum HOM05D005355 ORTHO05D006591 2.0e-07 61.6 54 51.9
SMO367G1068 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 4.4e-07 60.5 394 29.4
DCAR_011615 Daucus carota HOM05D005355 ORTHO05D006591 1.3e-06 58.9 58 50.0
SGA_v2.0_scaffold340G49302 Striga asiatica HOM05D005355 ORTHO05D006591 3.7e-06 57.4 62 48.4


User provided reference genes

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